RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 GOLIM4O00461 696 aa16.18■□□□□ 0.18
CDH8-201ENST00000299345 IL2RBP14784 551 aa16.18■□□□□ 0.18
CDH8-201ENST00000299345 MCMDC2Q4G0Z9 681 aa16.18■□□□□ 0.18
CDH8-201ENST00000299345 NEK1Q96PY6 1258 aa16.18■□□□□ 0.18
CDH8-201ENST00000299345 FAM184AQ8NB25 1140 aa16.18■□□□□ 0.18
CDH8-201ENST00000299345 PHRF1Q9P1Y6 1649 aaKnown RBP16.18■□□□□ 0.18
CDH8-201ENST00000299345 RPAP1Q9BWH6 1393 aaPredicted RBP16.17■□□□□ 0.18
CDH8-201ENST00000299345 H3BQV1 296 aa16.17■□□□□ 0.18
CDH8-201ENST00000299345 TAF5LO75529 589 aa16.17■□□□□ 0.18
CDH8-201ENST00000299345 IFFO2Q5TF58 517 aa16.17■□□□□ 0.18
CDH8-201ENST00000299345 MTMR6Q9Y217 621 aa16.17■□□□□ 0.18
CDH8-201ENST00000299345 KIF1AQ12756 1690 aa16.17■□□□□ 0.18
CDH8-201ENST00000299345 CCDC57Q2TAC2 916 aa16.17■□□□□ 0.18
CDH8-201ENST00000299345 CCDC129Q6ZRS4 1044 aa16.17■□□□□ 0.18
CDH8-201ENST00000299345 CEP126Q9P2H0 1117 aa16.17■□□□□ 0.18
CDH8-201ENST00000299345 CCDC39Q9UFE4 941 aa16.17■□□□□ 0.18
CDH8-201ENST00000299345 ADAMTSL3P82987 1691 aa16.17■□□□□ 0.18
CDH8-201ENST00000299345 ERVV-2B6SEH9 535 aa16.17■□□□□ 0.18
CDH8-201ENST00000299345 IL15P40933 162 aaPredicted RBP16.17■□□□□ 0.18
CDH8-201ENST00000299345 TIMM10P62072 90 aa16.17■□□□□ 0.18
CDH8-201ENST00000299345 RABL6Q3YEC7 729 aaPredicted RBP16.17■□□□□ 0.18
CDH8-201ENST00000299345 WDR17Q8IZU2 1322 aa16.17■□□□□ 0.18
CDH8-201ENST00000299345 RFX5P48382 616 aaPredicted RBP16.16■□□□□ 0.18
CDH8-201ENST00000299345 KCNB2Q92953 911 aa16.16■□□□□ 0.18
CDH8-201ENST00000299345 TMOD3Q9NYL9 352 aa16.16■□□□□ 0.18
CDH8-201ENST00000299345 NBPF26B4DH59 902 aa16.16■□□□□ 0.18
CDH8-201ENST00000299345 IFIT1P09914 478 aaKnown RBP16.16■□□□□ 0.18
CDH8-201ENST00000299345 NBPF14Q5TI25 921 aa16.16■□□□□ 0.18
CDH8-201ENST00000299345 NBPF10Q6P3W6 841 aaKnown RBP16.16■□□□□ 0.18
CDH8-201ENST00000299345 BRINP3Q76B58 766 aa16.16■□□□□ 0.18
CDH8-201ENST00000299345 NBPF15Q8N660 670 aa16.16■□□□□ 0.18
CDH8-201ENST00000299345 A0A0G2JS52 829 aa16.15■□□□□ 0.18
CDH8-201ENST00000299345 CCDC85AQ96PX6 553 aaPredicted RBP16.15■□□□□ 0.18
CDH8-201ENST00000299345 SEC62Q99442 399 aaKnown RBP16.15■□□□□ 0.18
CDH8-201ENST00000299345 CCDC191Q8NCU4 936 aa16.15■□□□□ 0.18
CDH8-201ENST00000299345 HAUS7Q99871 368 aa16.15■□□□□ 0.18
CDH8-201ENST00000299345 HS1BP3Q53T59 392 aa16.15■□□□□ 0.18
CDH8-201ENST00000299345 KIF6Q6ZMV9 814 aa16.15■□□□□ 0.18
CDH8-201ENST00000299345 KBTBD3Q8NAB2 608 aa16.15■□□□□ 0.18
CDH8-201ENST00000299345 TMEM87AQ8NBN3 555 aa16.14■□□□□ 0.17
CDH8-201ENST00000299345 PAG1Q9NWQ8 432 aa16.14■□□□□ 0.17
CDH8-201ENST00000299345 DCCP43146 1447 aa16.14■□□□□ 0.17
CDH8-201ENST00000299345 H7C1W4 665 aa16.14■□□□□ 0.17
CDH8-201ENST00000299345 FKBP4Q02790 459 aaKnown RBP eCLIP16.14■□□□□ 0.17
CDH8-201ENST00000299345 LRRFIP1Q32MZ4 808 aaKnown RBP16.14■□□□□ 0.17
CDH8-201ENST00000299345 N4BP2Q86UW6 1770 aaPredicted RBP16.14■□□□□ 0.17
CDH8-201ENST00000299345 CCDC158Q5M9N0 1113 aa16.14■□□□□ 0.17
CDH8-201ENST00000299345 LRP10Q7Z4F1 713 aa16.14■□□□□ 0.17
CDH8-201ENST00000299345 ZNF594Q96JF6 807 aaPredicted RBP16.14■□□□□ 0.17
CDH8-201ENST00000299345 EYA2O00167 538 aa16.13■□□□□ 0.17
CDH8-201ENST00000299345 WASHC4Q2M389 1173 aa16.13■□□□□ 0.17
CDH8-201ENST00000299345 DDX11Q96FC9 970 aa16.13■□□□□ 0.17
CDH8-201ENST00000299345 SLAIN2Q9P270 581 aa16.13■□□□□ 0.17
CDH8-201ENST00000299345 Q6ZUG5 572 aa16.12■□□□□ 0.17
CDH8-201ENST00000299345 LRRC2Q9BYS8 371 aa16.12■□□□□ 0.17
CDH8-201ENST00000299345 KIF3AQ9Y496 699 aa16.12■□□□□ 0.17
CDH8-201ENST00000299345 HCLS1P14317 486 aaPredicted RBP16.12■□□□□ 0.17
CDH8-201ENST00000299345 GIMAP6Q6P9H5 292 aa16.12■□□□□ 0.17
CDH8-201ENST00000299345 BRF1Q92994 677 aa16.12■□□□□ 0.17
CDH8-201ENST00000299345 TFIP11Q9UBB9 837 aaKnown RBP16.12■□□□□ 0.17
CDH8-201ENST00000299345 TAF6LQ9Y6J9 622 aa16.12■□□□□ 0.17
CDH8-201ENST00000299345 CPDO75976 1380 aa16.12■□□□□ 0.17
CDH8-201ENST00000299345 MED23Q9ULK4 1368 aa16.12■□□□□ 0.17
CDH8-201ENST00000299345 TTC39AQ5SRH9 613 aa16.12■□□□□ 0.17
CDH8-201ENST00000299345 FAM173BQ6P4H8 233 aa16.12■□□□□ 0.17
CDH8-201ENST00000299345 SPATA32Q96LK8 384 aa16.12■□□□□ 0.17
CDH8-201ENST00000299345 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.11■□□□□ 0.17
CDH8-201ENST00000299345 CDC37L1Q7L3B6 337 aa16.11■□□□□ 0.17
CDH8-201ENST00000299345 HMGB1P09429 215 aaKnown RBP16.11■□□□□ 0.17
CDH8-201ENST00000299345 SCAND2PQ9GZW5 306 aaPredicted RBP16.11■□□□□ 0.17
CDH8-201ENST00000299345 A0A1B0GUL7 405 aa16.11■□□□□ 0.17
CDH8-201ENST00000299345 FOSBP53539 338 aa16.11■□□□□ 0.17
CDH8-201ENST00000299345 FOXO4P98177 505 aa16.11■□□□□ 0.17
CDH8-201ENST00000299345 LRRC24Q50LG9 513 aa16.11■□□□□ 0.17
CDH8-201ENST00000299345 BICD2Q8TD16 824 aa16.11■□□□□ 0.17
CDH8-201ENST00000299345 PDLIM2Q96JY6 352 aa16.11■□□□□ 0.17
CDH8-201ENST00000299345 SNRKQ9NRH2 765 aa16.11■□□□□ 0.17
CDH8-201ENST00000299345 USP25Q9UHP3 1055 aa16.11■□□□□ 0.17
CDH8-201ENST00000299345 TRPM3Q9HCF6 1732 aaPredicted RBP16.11■□□□□ 0.17
CDH8-201ENST00000299345 STARD3NLO95772 234 aa16.1■□□□□ 0.17
CDH8-201ENST00000299345 SYTL4Q96C24 671 aaPredicted RBP16.1■□□□□ 0.17
CDH8-201ENST00000299345 CARD10Q9BWT7 1032 aa16.1■□□□□ 0.17
CDH8-201ENST00000299345 KIAA2012Q0VF49 1180 aa16.1■□□□□ 0.17
CDH8-201ENST00000299345 UVSSAQ2YD98 709 aa16.1■□□□□ 0.17
CDH8-201ENST00000299345 MPNDQ8N594 471 aa16.1■□□□□ 0.17
CDH8-201ENST00000299345 NOL7Q9UMY1 257 aaKnown RBP16.1■□□□□ 0.17
CDH8-201ENST00000299345 CHGBP05060 677 aa16.1■□□□□ 0.17
CDH8-201ENST00000299345 DNTTIP2Q5QJE6 756 aaKnown RBP16.1■□□□□ 0.17
CDH8-201ENST00000299345 AKAP2Q9Y2D5 859 aa16.1■□□□□ 0.17
CDH8-201ENST00000299345 CYP21A2P08686 494 aa16.09■□□□□ 0.17
CDH8-201ENST00000299345 TOB2Q14106 344 aaPredicted RBP16.09■□□□□ 0.17
CDH8-201ENST00000299345 RGPD5Q99666 1765 aa16.09■□□□□ 0.17
CDH8-201ENST00000299345 CCDC192P0DO97 292 aa16.09■□□□□ 0.17
CDH8-201ENST00000299345 CASP7P55210 303 aa16.09■□□□□ 0.17
CDH8-201ENST00000299345 TEX13AQ9BXU3 409 aaPredicted RBP16.09■□□□□ 0.17
CDH8-201ENST00000299345 HELLSQ9NRZ9 838 aa16.09■□□□□ 0.17
CDH8-201ENST00000299345 IFIT5Q13325 482 aaKnown RBP16.09■□□□□ 0.17
CDH8-201ENST00000299345 TSGA10IPQ3SY00 556 aa16.09■□□□□ 0.17
CDH8-201ENST00000299345 NUP62CLQ9H1M0 184 aa16.09■□□□□ 0.17
CDH8-201ENST00000299345 ZKSCAN5Q9Y2L8 839 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms