RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 EHBP1Q8NDI1 1231 aa16.31■□□□□ 0.2
COL1A2-201ENST00000297268 MNAT1P51948 309 aa16.31■□□□□ 0.2
COL1A2-201ENST00000297268 TSPYL6Q8N831 410 aa16.31■□□□□ 0.2
COL1A2-201ENST00000297268 CATIPQ7Z7H3 387 aa16.31■□□□□ 0.2
COL1A2-201ENST00000297268 PRDM11Q9NQV5 511 aa16.31■□□□□ 0.2
COL1A2-201ENST00000297268 LMOD1P29536 600 aaPredicted RBP16.31■□□□□ 0.2
COL1A2-201ENST00000297268 PHF23Q9BUL5 403 aaPredicted RBP16.3■□□□□ 0.2
COL1A2-201ENST00000297268 MKNK2Q9HBH9 465 aa16.3■□□□□ 0.2
COL1A2-201ENST00000297268 NPHP3Q7Z494 1330 aa16.3■□□□□ 0.2
COL1A2-201ENST00000297268 RTL1A6NKG5 1358 aa16.3■□□□□ 0.2
COL1A2-201ENST00000297268 GPATCH8Q9UKJ3 1502 aaKnown RBP16.3■□□□□ 0.2
COL1A2-201ENST00000297268 GOLGA6L10A0A0M3HER8 536 aa16.3■□□□□ 0.2
COL1A2-201ENST00000297268 PER1O15534 1290 aaPredicted RBP16.3■□□□□ 0.2
COL1A2-201ENST00000297268 CCDC175P0C221 793 aa16.3■□□□□ 0.2
COL1A2-201ENST00000297268 SYT10Q6XYQ8 523 aa16.3■□□□□ 0.2
COL1A2-201ENST00000297268 BBXQ8WY36 941 aaPredicted RBP16.3■□□□□ 0.2
COL1A2-201ENST00000297268 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.3■□□□□ 0.2
COL1A2-201ENST00000297268 CKAP4Q07065 602 aaKnown RBP16.3■□□□□ 0.2
COL1A2-201ENST00000297268 UBE3BQ7Z3V4 1068 aa16.3■□□□□ 0.2
COL1A2-201ENST00000297268 GOLGA1Q92805 767 aa16.3■□□□□ 0.2
COL1A2-201ENST00000297268 GCOM1H8Y6P7 765 aaPredicted RBP16.29■□□□□ 0.2
COL1A2-201ENST00000297268 HSF2BPO75031 334 aa16.29■□□□□ 0.2
COL1A2-201ENST00000297268 MYZAPP0CAP1 466 aa16.29■□□□□ 0.2
COL1A2-201ENST00000297268 SMC1AQ14683 1233 aaKnown RBP16.29■□□□□ 0.2
COL1A2-201ENST00000297268 CHMLP26374 656 aa16.29■□□□□ 0.2
COL1A2-201ENST00000297268 MARCKSP29966 332 aaPredicted RBP16.29■□□□□ 0.2
COL1A2-201ENST00000297268 NMIQ13287 307 aaPredicted RBP16.29■□□□□ 0.2
COL1A2-201ENST00000297268 CTAGE1Q96RT6 745 aa16.29■□□□□ 0.2
COL1A2-201ENST00000297268 RAB34Q9BZG1 259 aa16.29■□□□□ 0.2
COL1A2-201ENST00000297268 TMCO5BA8MYB1 307 aa16.29■□□□□ 0.2
COL1A2-201ENST00000297268 ZNF445P59923 1031 aa16.29■□□□□ 0.2
COL1A2-201ENST00000297268 CEP112Q8N8E3 955 aa16.29■□□□□ 0.2
COL1A2-201ENST00000297268 PYM1Q9BRP8 204 aaKnown RBP16.29■□□□□ 0.2
COL1A2-201ENST00000297268 ALG1Q9BT22 464 aa16.29■□□□□ 0.2
COL1A2-201ENST00000297268 UBA5Q9GZZ9 404 aa16.29■□□□□ 0.2
COL1A2-201ENST00000297268 ATP5J2-PTCD1G3V325 749 aa16.28■□□□□ 0.2
COL1A2-201ENST00000297268 CAPN2P17655 700 aa16.28■□□□□ 0.2
COL1A2-201ENST00000297268 GTF2A1P52655 376 aaPredicted RBP16.28■□□□□ 0.2
COL1A2-201ENST00000297268 TMEM266Q2M3C6 531 aa16.28■□□□□ 0.2
COL1A2-201ENST00000297268 FAM114A1Q8IWE2 563 aa16.28■□□□□ 0.2
COL1A2-201ENST00000297268 SLC5A1P13866 664 aa16.28■□□□□ 0.2
COL1A2-201ENST00000297268 AFMP43652 599 aa16.28■□□□□ 0.2
COL1A2-201ENST00000297268 CAVIN4Q5BKX8 364 aa16.28■□□□□ 0.2
COL1A2-201ENST00000297268 ZNF287Q9HBT7 754 aa16.28■□□□□ 0.2
COL1A2-201ENST00000297268 JARID2Q92833 1246 aaPredicted RBP16.28■□□□□ 0.2
COL1A2-201ENST00000297268 CHPF2Q9P2E5 772 aa16.28■□□□□ 0.2
COL1A2-201ENST00000297268 ADGRL1O94910 1474 aa16.28■□□□□ 0.2
COL1A2-201ENST00000297268 RRAGBQ5VZM2 374 aa16.28■□□□□ 0.2
COL1A2-201ENST00000297268 TTF1Q15361 905 aaPredicted RBP16.27■□□□□ 0.2
COL1A2-201ENST00000297268 IFNKQ9P0W0 207 aa16.27■□□□□ 0.2
COL1A2-201ENST00000297268 GSTTP1A0A1W2PQM5 241 aa16.27■□□□□ 0.2
COL1A2-201ENST00000297268 MCMDC2Q4G0Z9 681 aa16.27■□□□□ 0.2
COL1A2-201ENST00000297268 TRIM47Q96LD4 638 aa16.27■□□□□ 0.2
COL1A2-201ENST00000297268 ANKRD18BA2A2Z9 1011 aa16.27■□□□□ 0.19
COL1A2-201ENST00000297268 SPTLC2O15270 562 aa16.27■□□□□ 0.19
COL1A2-201ENST00000297268 TCP11L1Q9NUJ3 509 aa16.27■□□□□ 0.19
COL1A2-201ENST00000297268 ZMYM4Q5VZL5 1548 aa16.27■□□□□ 0.19
COL1A2-201ENST00000297268 ZBTB7BO15156 539 aaPredicted RBP16.27■□□□□ 0.19
COL1A2-201ENST00000297268 TRIM21P19474 475 aaKnown RBP16.27■□□□□ 0.19
COL1A2-201ENST00000297268 CETN2P41208 172 aa16.27■□□□□ 0.19
COL1A2-201ENST00000297268 CCDC40Q4G0X9 1142 aa16.27■□□□□ 0.19
COL1A2-201ENST00000297268 CTAGE9A4FU28 777 aa16.26■□□□□ 0.19
COL1A2-201ENST00000297268 UBA7P41226 1012 aa16.26■□□□□ 0.19
COL1A2-201ENST00000297268 AMPD3Q01432 767 aa16.26■□□□□ 0.19
COL1A2-201ENST00000297268 MFSD6Q6ZSS7 791 aa16.26■□□□□ 0.19
COL1A2-201ENST00000297268 ZBTB3Q9H5J0 574 aa16.26■□□□□ 0.19
COL1A2-201ENST00000297268 RIOK3O14730 519 aaKnown RBP16.26■□□□□ 0.19
COL1A2-201ENST00000297268 KIF20AO95235 890 aa16.26■□□□□ 0.19
COL1A2-201ENST00000297268 CREB3L3Q68CJ9 461 aa16.26■□□□□ 0.19
COL1A2-201ENST00000297268 BICDL1Q6ZP65 573 aa16.26■□□□□ 0.19
COL1A2-201ENST00000297268 AKR1B10O60218 316 aa16.26■□□□□ 0.19
COL1A2-201ENST00000297268 CCDC91Q7Z6B0 441 aa16.26■□□□□ 0.19
COL1A2-201ENST00000297268 MYRIPQ8NFW9 859 aa16.26■□□□□ 0.19
COL1A2-201ENST00000297268 CNKSR2Q8WXI2 1034 aa16.26■□□□□ 0.19
COL1A2-201ENST00000297268 IDEP14735 1019 aa16.26■□□□□ 0.19
COL1A2-201ENST00000297268 RUFY3Q7L099 469 aa16.26■□□□□ 0.19
COL1A2-201ENST00000297268 VPS18Q9P253 973 aa16.26■□□□□ 0.19
COL1A2-201ENST00000297268 TTC41PQ6P2S7 1318 aa16.25■□□□□ 0.19
COL1A2-201ENST00000297268 MYO1BO43795 1136 aa16.25■□□□□ 0.19
COL1A2-201ENST00000297268 CYLC1P35663 651 aaPredicted RBP16.25■□□□□ 0.19
COL1A2-201ENST00000297268 NOP2P46087 812 aaKnown RBP16.25■□□□□ 0.19
COL1A2-201ENST00000297268 ZSCAN29Q8IWY8 852 aaPredicted RBP16.25■□□□□ 0.19
COL1A2-201ENST00000297268 CALML4Q96GE6 196 aa16.25■□□□□ 0.19
COL1A2-201ENST00000297268 CARD14Q9BXL6 1004 aa16.25■□□□□ 0.19
COL1A2-201ENST00000297268 RMND1Q9NWS8 449 aa16.25■□□□□ 0.19
COL1A2-201ENST00000297268 TRMT112Q9UI30 125 aaKnown RBP16.25■□□□□ 0.19
COL1A2-201ENST00000297268 C17orf53Q8N3J3 647 aaPredicted RBP16.25■□□□□ 0.19
COL1A2-201ENST00000297268 GTF3C6Q969F1 213 aa16.25■□□□□ 0.19
COL1A2-201ENST00000297268 ZBTB43O43298 467 aa16.25■□□□□ 0.19
COL1A2-201ENST00000297268 RBM5P52756 815 aaKnown RBP eCLIP16.25■□□□□ 0.19
COL1A2-201ENST00000297268 TERF1P54274 439 aa16.25■□□□□ 0.19
COL1A2-201ENST00000297268 FBXO31Q5XUX0 539 aaPredicted RBP16.25■□□□□ 0.19
COL1A2-201ENST00000297268 KARSQ15046 597 aaKnown RBP16.24■□□□□ 0.19
COL1A2-201ENST00000297268 CCDC96Q2M329 555 aa16.24■□□□□ 0.19
COL1A2-201ENST00000297268 CWC25Q9NXE8 425 aaPredicted RBP16.24■□□□□ 0.19
COL1A2-201ENST00000297268 PRPF4BQ13523 1007 aaKnown RBP16.24■□□□□ 0.19
COL1A2-201ENST00000297268 ANKLE2Q86XL3 938 aa16.24■□□□□ 0.19
COL1A2-201ENST00000297268 ZNF444Q8N0Y2 327 aaPredicted RBP16.24■□□□□ 0.19
COL1A2-201ENST00000297268 ERO1AQ96HE7 468 aa16.24■□□□□ 0.19
COL1A2-201ENST00000297268 ZNF608Q9ULD9 1512 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms