RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 KCNQ3O43525 872 aa14.01□□□□□ -0.17
SYNGAP1-201ENST00000293748 NFXL1Q6ZNB6 911 aa14.01□□□□□ -0.17
SYNGAP1-201ENST00000293748 PPP1R42Q7Z4L9 355 aa14.01□□□□□ -0.17
SYNGAP1-201ENST00000293748 ZSCAN30Q86W11 494 aa14.01□□□□□ -0.17
SYNGAP1-201ENST00000293748 DDX21Q9NR30 783 aaKnown RBP eCLIP14.01□□□□□ -0.17
SYNGAP1-201ENST00000293748 TBC1D2BQ9UPU7 963 aa14.01□□□□□ -0.17
SYNGAP1-201ENST00000293748 WDR33Q9C0J8 1336 aaKnown RBP14.01□□□□□ -0.17
SYNGAP1-201ENST00000293748 UBTFL1P0CB47 393 aaPredicted RBP14.01□□□□□ -0.17
SYNGAP1-201ENST00000293748 MSL1Q68DK7 614 aa14.01□□□□□ -0.17
SYNGAP1-201ENST00000293748 CCDC191Q8NCU4 936 aa14.01□□□□□ -0.17
SYNGAP1-201ENST00000293748 UQCRHLA0A096LP55 91 aa14□□□□□ -0.17
SYNGAP1-201ENST00000293748 UQCRHP07919 91 aa14□□□□□ -0.17
SYNGAP1-201ENST00000293748 RDXP35241 583 aaKnown RBP14□□□□□ -0.17
SYNGAP1-201ENST00000293748 PDILTQ8N807 584 aa14□□□□□ -0.17
SYNGAP1-201ENST00000293748 ERICH2A1L162 156 aa14□□□□□ -0.17
SYNGAP1-201ENST00000293748 FIBPO43427 364 aa14□□□□□ -0.17
SYNGAP1-201ENST00000293748 NBPF5PQ86XG9 351 aaPredicted RBP14□□□□□ -0.17
SYNGAP1-201ENST00000293748 CLASRPQ8N2M8 674 aaKnown RBP14□□□□□ -0.17
SYNGAP1-201ENST00000293748 USP16Q9Y5T5 823 aa14□□□□□ -0.17
SYNGAP1-201ENST00000293748 BRWD3Q6RI45 1802 aa14□□□□□ -0.17
SYNGAP1-201ENST00000293748 AMOTL1Q8IY63 956 aa14□□□□□ -0.17
SYNGAP1-201ENST00000293748 LRRC4BQ9NT99 713 aa14□□□□□ -0.17
SYNGAP1-201ENST00000293748 COL15A1P39059 1388 aa14□□□□□ -0.17
SYNGAP1-201ENST00000293748 NARFQ9UHQ1 456 aa14□□□□□ -0.17
SYNGAP1-201ENST00000293748 NHSQ6T4R5 1651 aa13.99□□□□□ -0.17
SYNGAP1-201ENST00000293748 TPTE2Q6XPS3 522 aa13.99□□□□□ -0.17
SYNGAP1-201ENST00000293748 PDCL2Q8N4E4 241 aa13.99□□□□□ -0.17
SYNGAP1-201ENST00000293748 WNK3Q9BYP7 1800 aa13.99□□□□□ -0.17
SYNGAP1-201ENST00000293748 HIP1O00291 1037 aa13.99□□□□□ -0.17
SYNGAP1-201ENST00000293748 SLC4A2P04920 1241 aa13.99□□□□□ -0.17
SYNGAP1-201ENST00000293748 ARHGEF1Q92888 912 aaKnown RBP13.99□□□□□ -0.17
SYNGAP1-201ENST00000293748 ZBTB3Q9H5J0 574 aa13.99□□□□□ -0.17
SYNGAP1-201ENST00000293748 SMC2O95347 1197 aa13.98□□□□□ -0.17
SYNGAP1-201ENST00000293748 CAGE1Q8TC20 777 aa13.98□□□□□ -0.17
SYNGAP1-201ENST00000293748 DOT1LQ8TEK3 1739 aa13.98□□□□□ -0.17
SYNGAP1-201ENST00000293748 FAM177BA6PVY3 158 aa13.98□□□□□ -0.17
SYNGAP1-201ENST00000293748 NAP1L1P55209 391 aaKnown RBP13.98□□□□□ -0.17
SYNGAP1-201ENST00000293748 PARP10Q53GL7 1025 aa13.98□□□□□ -0.17
SYNGAP1-201ENST00000293748 USPL1Q5W0Q7 1092 aa13.98□□□□□ -0.17
SYNGAP1-201ENST00000293748 NIP7Q9Y221 180 aaKnown RBP eCLIP13.98□□□□□ -0.17
SYNGAP1-201ENST00000293748 AKT1S1Q96B36 256 aa13.98□□□□□ -0.17
SYNGAP1-201ENST00000293748 ZNF827Q17R98 1081 aa13.98□□□□□ -0.17
SYNGAP1-201ENST00000293748 SMARCE1Q969G3 411 aa13.98□□□□□ -0.17
SYNGAP1-201ENST00000293748 ZNF396Q96N95 335 aaPredicted RBP13.98□□□□□ -0.17
SYNGAP1-201ENST00000293748 FILIP1LQ4L180 1135 aa13.97□□□□□ -0.17
SYNGAP1-201ENST00000293748 COL23A1Q86Y22 540 aaPredicted RBP13.97□□□□□ -0.17
SYNGAP1-201ENST00000293748 XAGE3Q8WTP9 111 aa13.97□□□□□ -0.17
SYNGAP1-201ENST00000293748 CHPF2Q9P2E5 772 aa13.97□□□□□ -0.17
SYNGAP1-201ENST00000293748 G3V3G9 751 aa13.97□□□□□ -0.17
SYNGAP1-201ENST00000293748 DCAF8Q5TAQ9 597 aa13.97□□□□□ -0.17
SYNGAP1-201ENST00000293748 TAF3Q5VWG9 929 aa13.97□□□□□ -0.17
SYNGAP1-201ENST00000293748 ANKRD13DQ6ZTN6 518 aa13.97□□□□□ -0.17
SYNGAP1-201ENST00000293748 CNBD1Q8NA66 436 aa13.97□□□□□ -0.17
SYNGAP1-201ENST00000293748 CLEC4GQ6UXB4 293 aa13.97□□□□□ -0.17
SYNGAP1-201ENST00000293748 COPS6Q7L5N1 327 aa13.97□□□□□ -0.17
SYNGAP1-201ENST00000293748 PROM2Q8N271 834 aa13.97□□□□□ -0.17
SYNGAP1-201ENST00000293748 MMP10P09238 476 aa13.96□□□□□ -0.17
SYNGAP1-201ENST00000293748 XBP1P17861 261 aa13.96□□□□□ -0.17
SYNGAP1-201ENST00000293748 FOSBP53539 338 aa13.96□□□□□ -0.17
SYNGAP1-201ENST00000293748 SPC24Q8NBT2 197 aa13.96□□□□□ -0.17
SYNGAP1-201ENST00000293748 PIP4K2AP48426 406 aaPredicted RBP13.96□□□□□ -0.18
SYNGAP1-201ENST00000293748 KRT85P78386 507 aa13.96□□□□□ -0.18
SYNGAP1-201ENST00000293748 NOL10Q9BSC4 688 aaKnown RBP13.96□□□□□ -0.18
SYNGAP1-201ENST00000293748 PRM3Q9NNZ6 103 aa13.96□□□□□ -0.18
SYNGAP1-201ENST00000293748 OFD1O75665 1012 aa13.95□□□□□ -0.18
SYNGAP1-201ENST00000293748 SLFN5Q08AF3 891 aa13.95□□□□□ -0.18
SYNGAP1-201ENST00000293748 FSD1Q9BTV5 496 aa13.95□□□□□ -0.18
SYNGAP1-201ENST00000293748 ERVV-1B6SEH8 477 aa13.95□□□□□ -0.18
SYNGAP1-201ENST00000293748 PDIA4P13667 645 aaKnown RBP13.95□□□□□ -0.18
SYNGAP1-201ENST00000293748 BRMS1Q9HCU9 246 aa13.95□□□□□ -0.18
SYNGAP1-201ENST00000293748 SURF6O75683 361 aaKnown RBP13.95□□□□□ -0.18
SYNGAP1-201ENST00000293748 BCAR3O75815 825 aa13.95□□□□□ -0.18
SYNGAP1-201ENST00000293748 MYO6Q9UM54 1294 aa13.95□□□□□ -0.18
SYNGAP1-201ENST00000293748 DHX16O60231 1041 aaKnown RBP13.95□□□□□ -0.18
SYNGAP1-201ENST00000293748 JMYQ8N9B5 988 aa13.95□□□□□ -0.18
SYNGAP1-201ENST00000293748 PNPLA7Q6ZV29 1317 aa13.94□□□□□ -0.18
SYNGAP1-201ENST00000293748 MRC1P22897 1456 aa13.94□□□□□ -0.18
SYNGAP1-201ENST00000293748 ERLIN1O75477 346 aa13.94□□□□□ -0.18
SYNGAP1-201ENST00000293748 EIF3JO75822 258 aaKnown RBP13.94□□□□□ -0.18
SYNGAP1-201ENST00000293748 ZNF853P0CG23 659 aa13.94□□□□□ -0.18
SYNGAP1-201ENST00000293748 EIF5P55010 431 aaKnown RBP13.94□□□□□ -0.18
SYNGAP1-201ENST00000293748 TSPYL1Q9H0U9 437 aa13.94□□□□□ -0.18
SYNGAP1-201ENST00000293748 TNMDQ9H2S6 317 aa13.94□□□□□ -0.18
SYNGAP1-201ENST00000293748 MAP3K15Q6ZN16 1313 aa13.94□□□□□ -0.18
SYNGAP1-201ENST00000293748 PDE6BP35913 854 aa13.94□□□□□ -0.18
SYNGAP1-201ENST00000293748 MVPQ14764 893 aaKnown RBP13.94□□□□□ -0.18
SYNGAP1-201ENST00000293748 ANKRD1Q15327 319 aa13.94□□□□□ -0.18
SYNGAP1-201ENST00000293748 PLBD2Q8NHP8 589 aa13.94□□□□□ -0.18
SYNGAP1-201ENST00000293748 AXDND1Q5T1B0 1012 aaPredicted RBP13.93□□□□□ -0.18
SYNGAP1-201ENST00000293748 TRMT112Q9UI30 125 aaKnown RBP13.93□□□□□ -0.18
SYNGAP1-201ENST00000293748 RGL2O15211 777 aa13.93□□□□□ -0.18
SYNGAP1-201ENST00000293748 GPTP24298 496 aa13.93□□□□□ -0.18
SYNGAP1-201ENST00000293748 STK38Q15208 465 aa13.93□□□□□ -0.18
SYNGAP1-201ENST00000293748 C8orf58Q8NAV2 365 aa13.93□□□□□ -0.18
SYNGAP1-201ENST00000293748 RPGRQ92834 1020 aaKnown RBP13.93□□□□□ -0.18
SYNGAP1-201ENST00000293748 UTP14AQ9BVJ6 771 aaKnown RBP13.93□□□□□ -0.18
SYNGAP1-201ENST00000293748 USP42Q9H9J4 1324 aaKnown RBP13.93□□□□□ -0.18
SYNGAP1-201ENST00000293748 ATF7IPQ6VMQ6 1270 aa13.93□□□□□ -0.18
SYNGAP1-201ENST00000293748 SRP68Q9UHB9 627 aaKnown RBP13.93□□□□□ -0.18
SYNGAP1-201ENST00000293748 GPR162Q16538 588 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms