RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 MKRN1Q9UHC7 482 aaKnown RBP22.43■■□□□ 1.18
TFF3-201ENST00000291525 ZNRF3Q9ULT6 936 aa22.43■■□□□ 1.18
TFF3-201ENST00000291525 LRRC37AA6NMS7 1700 aa22.43■■□□□ 1.18
TFF3-201ENST00000291525 ITGBL1O95965 494 aaPredicted RBP22.42■■□□□ 1.18
TFF3-201ENST00000291525 CNTROBQ8N137 903 aa22.42■■□□□ 1.18
TFF3-201ENST00000291525 FAM89AQ96GI7 184 aa22.42■■□□□ 1.18
TFF3-201ENST00000291525 TAF1P21675 1872 aa22.42■■□□□ 1.18
TFF3-201ENST00000291525 CNTNAP1P78357 1384 aa22.41■■□□□ 1.18
TFF3-201ENST00000291525 LTBP1Q14766 1721 aa22.41■■□□□ 1.18
TFF3-201ENST00000291525 ELL2O00472 640 aaPredicted RBP22.41■■□□□ 1.18
TFF3-201ENST00000291525 HSPA1AP0DMV8 641 aaKnown RBP22.41■■□□□ 1.18
TFF3-201ENST00000291525 HSPA1BP0DMV9 641 aaKnown RBP22.41■■□□□ 1.18
TFF3-201ENST00000291525 SCNN1DP51172 638 aa22.41■■□□□ 1.18
TFF3-201ENST00000291525 KIAA2012Q0VF49 1180 aa22.41■■□□□ 1.18
TFF3-201ENST00000291525 SF3B3Q15393 1217 aaKnown RBP22.41■■□□□ 1.18
TFF3-201ENST00000291525 MAP1SQ66K74 1059 aaPredicted RBP22.41■■□□□ 1.18
TFF3-201ENST00000291525 USP50Q70EL3 339 aaPredicted RBP22.41■■□□□ 1.18
TFF3-201ENST00000291525 DDX58O95786 925 aaKnown RBP22.4■■□□□ 1.18
TFF3-201ENST00000291525 CCDC30Q5VVM6 783 aa22.4■■□□□ 1.18
TFF3-201ENST00000291525 ZNF428Q96B54 188 aa22.4■■□□□ 1.18
TFF3-201ENST00000291525 IRS4O14654 1257 aaPredicted RBP22.39■■□□□ 1.17
TFF3-201ENST00000291525 EPS15P42566 896 aa22.39■■□□□ 1.17
TFF3-201ENST00000291525 CDHR2Q9BYE9 1310 aa22.38■■□□□ 1.17
TFF3-201ENST00000291525 TNIP1Q15025 636 aa22.38■■□□□ 1.17
TFF3-201ENST00000291525 CIAPIN1Q6FI81 312 aa22.38■■□□□ 1.17
TFF3-201ENST00000291525 ZBTB38Q8NAP3 1195 aaPredicted RBP22.38■■□□□ 1.17
TFF3-201ENST00000291525 PHAXQ9H814 394 aaKnown RBP22.38■■□□□ 1.17
TFF3-201ENST00000291525 CXCL9Q07325 125 aa22.37■■□□□ 1.17
TFF3-201ENST00000291525 RTL5Q5HYW3 569 aaPredicted RBP22.37■■□□□ 1.17
TFF3-201ENST00000291525 C8orf58Q8NAV2 365 aa22.37■■□□□ 1.17
TFF3-201ENST00000291525 CCDC191Q8NCU4 936 aa22.37■■□□□ 1.17
TFF3-201ENST00000291525 MYD88Q99836 296 aa22.37■■□□□ 1.17
TFF3-201ENST00000291525 ADARB2Q9NS39 739 aaKnown RBP22.37■■□□□ 1.17
TFF3-201ENST00000291525 GPRC5DQ9NZD1 345 aa22.37■■□□□ 1.17
TFF3-201ENST00000291525 CCDC27Q2M243 656 aa22.36■■□□□ 1.17
TFF3-201ENST00000291525 BCL2L13Q9BXK5 485 aa22.36■■□□□ 1.17
TFF3-201ENST00000291525 DUOX1Q9NRD9 1551 aa22.36■■□□□ 1.17
TFF3-201ENST00000291525 CELF1Q92879 486 aaKnown RBP22.35■■□□□ 1.17
TFF3-201ENST00000291525 TRPM7Q96QT4 1865 aa22.34■■□□□ 1.17
TFF3-201ENST00000291525 GMPSP49915 693 aaPredicted RBP22.34■■□□□ 1.17
TFF3-201ENST00000291525 WASHC4Q2M389 1173 aa22.34■■□□□ 1.17
TFF3-201ENST00000291525 COL13A1Q5TAT6 717 aaPredicted RBP22.34■■□□□ 1.17
TFF3-201ENST00000291525 EYA3Q99504 573 aa22.34■■□□□ 1.17
TFF3-201ENST00000291525 STK31Q9BXU1 1019 aa22.34■■□□□ 1.17
TFF3-201ENST00000291525 CWC25Q9NXE8 425 aaPredicted RBP22.34■■□□□ 1.17
TFF3-201ENST00000291525 NSFL1CQ9UNZ2 370 aaKnown RBP22.34■■□□□ 1.17
TFF3-201ENST00000291525 PCCAP05165 728 aaPredicted RBP22.33■■□□□ 1.17
TFF3-201ENST00000291525 RPS8P62241 208 aaKnown RBP22.33■■□□□ 1.17
TFF3-201ENST00000291525 CCDC152Q4G0S7 254 aa22.33■■□□□ 1.17
TFF3-201ENST00000291525 METTL22Q9BUU2 404 aaPredicted RBP22.33■■□□□ 1.17
TFF3-201ENST00000291525 ABT1Q9ULW3 272 aaKnown RBP22.33■■□□□ 1.17
TFF3-201ENST00000291525 RASSF10A6NK89 507 aa22.32■■□□□ 1.16
TFF3-201ENST00000291525 C6orf229H3BNL8 230 aa22.32■■□□□ 1.16
TFF3-201ENST00000291525 RAD17O75943 681 aa22.32■■□□□ 1.16
TFF3-201ENST00000291525 PCNTO95613 3336 aa22.31■■□□□ 1.16
TFF3-201ENST00000291525 ANP32CO43423 234 aa22.31■■□□□ 1.16
TFF3-201ENST00000291525 PDE8AO60658 829 aa22.31■■□□□ 1.16
TFF3-201ENST00000291525 VEGFBP49765 207 aa22.31■■□□□ 1.16
TFF3-201ENST00000291525 DEFB115Q30KQ5 88 aa22.31■■□□□ 1.16
TFF3-201ENST00000291525 CCDC184Q52MB2 194 aa22.31■■□□□ 1.16
TFF3-201ENST00000291525 NCBP3Q53F19 620 aaKnown RBP22.31■■□□□ 1.16
TFF3-201ENST00000291525 WWC1Q8IX03 1113 aa22.31■■□□□ 1.16
TFF3-201ENST00000291525 AIDAQ96BJ3 306 aa22.31■■□□□ 1.16
TFF3-201ENST00000291525 IL16Q14005 1332 aa22.31■■□□□ 1.16
TFF3-201ENST00000291525 GPSM2P81274 684 aa22.3■■□□□ 1.16
TFF3-201ENST00000291525 NEXNQ0ZGT2 675 aa22.3■■□□□ 1.16
TFF3-201ENST00000291525 TNS4Q8IZW8 715 aa22.3■■□□□ 1.16
TFF3-201ENST00000291525 TSPYL6Q8N831 410 aa22.3■■□□□ 1.16
TFF3-201ENST00000291525 TSR2Q969E8 191 aaKnown RBP22.3■■□□□ 1.16
TFF3-201ENST00000291525 MRS2Q9HD23 443 aa22.3■■□□□ 1.16
TFF3-201ENST00000291525 H7C1D1 291 aa22.29■■□□□ 1.16
TFF3-201ENST00000291525 KSR2Q6VAB6 950 aa22.29■■□□□ 1.16
TFF3-201ENST00000291525 MAP3K2Q9Y2U5 619 aa22.29■■□□□ 1.16
TFF3-201ENST00000291525 YDJCA8MPS7 323 aa22.28■■□□□ 1.16
TFF3-201ENST00000291525 TWISTNBQ3B726 338 aaPredicted RBP22.28■■□□□ 1.16
TFF3-201ENST00000291525 ZC3H15Q8WU90 426 aaKnown RBP22.28■■□□□ 1.16
TFF3-201ENST00000291525 DBNDD1Q9H9R9 158 aa22.28■■□□□ 1.16
TFF3-201ENST00000291525 POLLQ9UGP5 575 aa22.28■■□□□ 1.16
TFF3-201ENST00000291525 RIMBP2O15034 1052 aa22.27■■□□□ 1.16
TFF3-201ENST00000291525 PODXL2Q9NZ53 605 aa22.27■■□□□ 1.16
TFF3-201ENST00000291525 CNOT7Q9UIV1 285 aaKnown RBP22.27■■□□□ 1.16
TFF3-201ENST00000291525 MYH3P11055 1940 aa22.27■■□□□ 1.16
TFF3-201ENST00000291525 CACNA1FO60840 1977 aa22.27■■□□□ 1.15
TFF3-201ENST00000291525 COL4A1P02462 1669 aa22.26■■□□□ 1.15
TFF3-201ENST00000291525 PI4KAP2A4QPH2 592 aa22.26■■□□□ 1.15
TFF3-201ENST00000291525 PI4KAP1Q8N8J0 262 aa22.26■■□□□ 1.15
TFF3-201ENST00000291525 TBC1D16Q8TBP0 767 aa22.26■■□□□ 1.15
TFF3-201ENST00000291525 DPF2Q92785 391 aa22.26■■□□□ 1.15
TFF3-201ENST00000291525 ZC3H12CQ9C0D7 883 aaKnown RBP22.26■■□□□ 1.15
TFF3-201ENST00000291525 SEC31BQ9NQW1 1179 aa22.26■■□□□ 1.15
TFF3-201ENST00000291525 ANKIB1Q9P2G1 1089 aa22.26■■□□□ 1.15
TFF3-201ENST00000291525 ZNF316A6NFI3 1004 aaPredicted RBP22.25■■□□□ 1.15
TFF3-201ENST00000291525 G3V3G9 751 aa22.25■■□□□ 1.15
TFF3-201ENST00000291525 ECE2O60344 883 aa22.25■■□□□ 1.15
TFF3-201ENST00000291525 RPS12P25398 132 aaKnown RBP22.25■■□□□ 1.15
TFF3-201ENST00000291525 ECE1P42892 770 aa22.25■■□□□ 1.15
TFF3-201ENST00000291525 DCAF8Q5TAQ9 597 aa22.25■■□□□ 1.15
TFF3-201ENST00000291525 ANKRD18AQ8IVF6 992 aa22.25■■□□□ 1.15
TFF3-201ENST00000291525 MICALL2Q8IY33 904 aa22.25■■□□□ 1.15
TFF3-201ENST00000291525 PGAP2Q9UHJ9 254 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms