RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 MRC1P22897 1456 aa24.1■■□□□ 1.45
TMED4-201ENST00000289577 RNMTO43148 476 aaKnown RBP24.1■■□□□ 1.45
TMED4-201ENST00000289577 PLEKHO1Q53GL0 409 aaPredicted RBP24.1■■□□□ 1.45
TMED4-201ENST00000289577 PGBD1Q96JS3 809 aa24.1■■□□□ 1.45
TMED4-201ENST00000289577 USPL1Q5W0Q7 1092 aa24.09■■□□□ 1.45
TMED4-201ENST00000289577 BOLA2Q9H3K6 86 aa24.09■■□□□ 1.45
TMED4-201ENST00000289577 RGPD2P0DJD1 1756 aa24.09■■□□□ 1.45
TMED4-201ENST00000289577 CEBPAP49715 358 aaPredicted RBP24.08■■□□□ 1.45
TMED4-201ENST00000289577 CBX1P83916 185 aa24.08■■□□□ 1.45
TMED4-201ENST00000289577 ZSCAN25Q6NSZ9 544 aa24.08■■□□□ 1.45
TMED4-201ENST00000289577 PHRF1Q9P1Y6 1649 aaKnown RBP24.08■■□□□ 1.45
TMED4-201ENST00000289577 NR1I2O75469 434 aa24.08■■□□□ 1.45
TMED4-201ENST00000289577 TAF5LO75529 589 aa24.08■■□□□ 1.45
TMED4-201ENST00000289577 LRMPQ12912 555 aa24.08■■□□□ 1.45
TMED4-201ENST00000289577 ZNF589Q86UQ0 364 aaPredicted RBP24.08■■□□□ 1.45
TMED4-201ENST00000289577 CAVIN2O95810 425 aa24.07■■□□□ 1.44
TMED4-201ENST00000289577 RESTQ13127 1097 aa24.07■■□□□ 1.44
TMED4-201ENST00000289577 SYCP1Q15431 976 aa24.07■■□□□ 1.44
TMED4-201ENST00000289577 AMOTQ4VCS5 1084 aa24.07■■□□□ 1.44
TMED4-201ENST00000289577 TRIM5Q9C035 493 aa24.07■■□□□ 1.44
TMED4-201ENST00000289577 NRBP1Q9UHY1 535 aa24.07■■□□□ 1.44
TMED4-201ENST00000289577 KCNA6P17658 529 aa24.07■■□□□ 1.44
TMED4-201ENST00000289577 C14orf37Q86TY3 774 aa24.07■■□□□ 1.44
TMED4-201ENST00000289577 GTF3C6Q969F1 213 aa24.07■■□□□ 1.44
TMED4-201ENST00000289577 KIF13AQ9H1H9 1805 aa24.06■■□□□ 1.44
TMED4-201ENST00000289577 CDC25BP30305 580 aa24.06■■□□□ 1.44
TMED4-201ENST00000289577 ZNF165P49910 485 aa24.06■■□□□ 1.44
TMED4-201ENST00000289577 KRT32Q14532 448 aa24.06■■□□□ 1.44
TMED4-201ENST00000289577 PXDNQ92626 1479 aa24.05■■□□□ 1.44
TMED4-201ENST00000289577 SMTNL1A8MU46 457 aa24.05■■□□□ 1.44
TMED4-201ENST00000289577 DRC7Q8IY82 874 aa24.05■■□□□ 1.44
TMED4-201ENST00000289577 GTPBP4Q9BZE4 634 aaKnown RBP24.05■■□□□ 1.44
TMED4-201ENST00000289577 PHF8Q9UPP1 1060 aa24.05■■□□□ 1.44
TMED4-201ENST00000289577 STK3Q13188 491 aa24.04■■□□□ 1.44
TMED4-201ENST00000289577 PRAMEF22A3QJZ6 481 aa24.04■■□□□ 1.44
TMED4-201ENST00000289577 DDX58O95786 925 aaKnown RBP24.04■■□□□ 1.44
TMED4-201ENST00000289577 LRRC59Q96AG4 307 aaKnown RBP24.04■■□□□ 1.44
TMED4-201ENST00000289577 DNAJC25Q9H1X3 360 aa24.04■■□□□ 1.44
TMED4-201ENST00000289577 SETD1BQ9UPS6 1966 aaKnown RBP24.04■■□□□ 1.44
TMED4-201ENST00000289577 JAK2O60674 1132 aa24.03■■□□□ 1.44
TMED4-201ENST00000289577 BICD2Q8TD16 824 aa24.03■■□□□ 1.44
TMED4-201ENST00000289577 DDX21Q9NR30 783 aaKnown RBP eCLIP24.03■■□□□ 1.44
TMED4-201ENST00000289577 NCBP1Q09161 790 aaKnown RBP24.03■■□□□ 1.44
TMED4-201ENST00000289577 ZSCAN16Q9H4T2 348 aaPredicted RBP24.03■■□□□ 1.44
TMED4-201ENST00000289577 SIPA1L3O60292 1781 aaPredicted RBP24.03■■□□□ 1.44
TMED4-201ENST00000289577 COL15A1P39059 1388 aa24.02■■□□□ 1.44
TMED4-201ENST00000289577 C1orf141Q5JVX7 400 aa24.02■■□□□ 1.44
TMED4-201ENST00000289577 BRF1Q92994 677 aa24.02■■□□□ 1.44
TMED4-201ENST00000289577 IGKV5-2P06315 115 aa24.02■■□□□ 1.44
TMED4-201ENST00000289577 SARM1Q6SZW1 724 aa24.02■■□□□ 1.44
TMED4-201ENST00000289577 THEMISQ8N1K5 641 aaPredicted RBP24.02■■□□□ 1.44
TMED4-201ENST00000289577 KCNH5Q8NCM2 988 aa24.02■■□□□ 1.44
TMED4-201ENST00000289577 CACTINQ8WUQ7 758 aaKnown RBP24.02■■□□□ 1.44
TMED4-201ENST00000289577 NEK1Q96PY6 1258 aa24.02■■□□□ 1.44
TMED4-201ENST00000289577 SIL1Q9H173 461 aa24.02■■□□□ 1.44
TMED4-201ENST00000289577 PDIA6Q15084 440 aa24.01■■□□□ 1.43
TMED4-201ENST00000289577 C16orf45Q96MC5 204 aaPredicted RBP24.01■■□□□ 1.43
TMED4-201ENST00000289577 CLIP2Q9UDT6 1046 aa24.01■■□□□ 1.43
TMED4-201ENST00000289577 PAXBP1Q9Y5B6 917 aa24.01■■□□□ 1.43
TMED4-201ENST00000289577 RFX7Q2KHR2 1363 aa24.01■■□□□ 1.43
TMED4-201ENST00000289577 TNNT1P13805 278 aa24■■□□□ 1.43
TMED4-201ENST00000289577 IQCB1Q15051 598 aa24■■□□□ 1.43
TMED4-201ENST00000289577 FEZ1Q99689 392 aa24■■□□□ 1.43
TMED4-201ENST00000289577 CFAP45Q9UL16 551 aa24■■□□□ 1.43
TMED4-201ENST00000289577 ATP5JP18859 108 aa24■■□□□ 1.43
TMED4-201ENST00000289577 U2AF2P26368 475 aaKnown RBP eCLIP24■■□□□ 1.43
TMED4-201ENST00000289577 CCDC144BQ3MJ40 725 aa24■■□□□ 1.43
TMED4-201ENST00000289577 CCDC144CPQ8IYA2 1237 aa24■■□□□ 1.43
TMED4-201ENST00000289577 KLHDC4Q8TBB5 520 aa23.99■■□□□ 1.43
TMED4-201ENST00000289577 SMARCC2Q8TAQ2 1214 aa23.99■■□□□ 1.43
TMED4-201ENST00000289577 EDC3Q96F86 508 aaKnown RBP23.99■■□□□ 1.43
TMED4-201ENST00000289577 SPDYE4A6NLX3 237 aa23.98■■□□□ 1.43
TMED4-201ENST00000289577 ADD1P35611 737 aaKnown RBP23.98■■□□□ 1.43
TMED4-201ENST00000289577 Q6ZUG5 572 aa23.98■■□□□ 1.43
TMED4-201ENST00000289577 U3KPZ7 1027 aaPredicted RBP23.98■■□□□ 1.43
TMED4-201ENST00000289577 LMTK3Q96Q04 1460 aa23.98■■□□□ 1.43
TMED4-201ENST00000289577 MRFAP1L1Q96HT8 127 aa23.98■■□□□ 1.43
TMED4-201ENST00000289577 LLPHQ9BRT6 129 aaKnown RBP23.98■■□□□ 1.43
TMED4-201ENST00000289577 H3BQV1 296 aa23.97■■□□□ 1.43
TMED4-201ENST00000289577 IFFO2Q5TF58 517 aa23.97■■□□□ 1.43
TMED4-201ENST00000289577 COPRSQ9NQ92 184 aa23.97■■□□□ 1.43
TMED4-201ENST00000289577 ADAMTS7Q9UKP4 1686 aa23.97■■□□□ 1.43
TMED4-201ENST00000289577 NEURL1BA8MQ27 555 aa23.96■■□□□ 1.43
TMED4-201ENST00000289577 CTAGE5O15320 804 aa23.96■■□□□ 1.43
TMED4-201ENST00000289577 AIMP1Q12904 312 aaKnown RBP23.96■■□□□ 1.43
TMED4-201ENST00000289577 EPHA10Q5JZY3 1008 aa23.96■■□□□ 1.43
TMED4-201ENST00000289577 DDX11Q96FC9 970 aa23.96■■□□□ 1.43
TMED4-201ENST00000289577 RCOR1Q9UKL0 485 aa23.96■■□□□ 1.43
TMED4-201ENST00000289577 ZHX1Q9UKY1 873 aaPredicted RBP23.96■■□□□ 1.43
TMED4-201ENST00000289577 NEMFO60524 1076 aa23.96■■□□□ 1.43
TMED4-201ENST00000289577 RBM6P78332 1123 aaKnown RBP23.96■■□□□ 1.43
TMED4-201ENST00000289577 DBNLQ9UJU6 430 aaKnown RBP23.96■■□□□ 1.43
TMED4-201ENST00000289577 MYH15Q9Y2K3 1946 aa23.96■■□□□ 1.43
TMED4-201ENST00000289577 ZNF609O15014 1411 aa23.95■■□□□ 1.43
TMED4-201ENST00000289577 SCRN1Q12765 414 aa23.95■■□□□ 1.42
TMED4-201ENST00000289577 GCKRQ14397 625 aa23.95■■□□□ 1.42
TMED4-201ENST00000289577 NAA16Q6N069 864 aaPredicted RBP23.95■■□□□ 1.42
TMED4-201ENST00000289577 LRRC8AQ8IWT6 810 aa23.95■■□□□ 1.42
TMED4-201ENST00000289577 TPD52L1Q16890 204 aaPredicted RBP23.95■■□□□ 1.42
TMED4-201ENST00000289577 RIC3Q7Z5B4 369 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms