RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 MICALL1Q8N3F8 863 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 NUP133Q8WUM0 1156 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 ATP2A3Q93084 1043 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 GCNAQ96QF7 691 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 DNAJC7Q99615 494 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 TMX1Q9H3N1 280 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 CD2APQ9Y5K6 639 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 PLXNC1O60486 1568 aa5.01□□□□□ -1.61
NCOA1-201ENST00000288599 IGHMBP2P38935 993 aaKnown RBP5□□□□□ -1.61
NCOA1-201ENST00000288599 CHMP6Q96FZ7 201 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 TAOK3Q9H2K8 898 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 SLC24A3Q9HC58 644 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 RTEL1Q9NZ71 1219 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 TTC37Q6PGP7 1564 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 SPDYE2BA6NHP3 402 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 SPDYE6P0CI01 402 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 CCDC148Q8NFR7 591 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 SMC6Q96SB8 1091 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 SFMBT1Q9UHJ3 866 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 SLC8A2Q9UPR5 921 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 LUC7L2Q9Y383 392 aaKnown RBP5□□□□□ -1.61
NCOA1-201ENST00000288599 RPUSD2Q8IZ73 545 aaKnown RBP5□□□□□ -1.61
NCOA1-201ENST00000288599 PROCA1Q8NCQ7 364 aaPredicted RBP5□□□□□ -1.61
NCOA1-201ENST00000288599 WDR48Q8TAF3 677 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 ZNF428Q96B54 188 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 ASCC2Q9H1I8 757 aaPredicted RBP5□□□□□ -1.61
NCOA1-201ENST00000288599 AFG3L2Q9Y4W6 797 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 GJA3Q9Y6H8 435 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 SPDYE16A6NNV3 312 aaPredicted RBP5□□□□□ -1.61
NCOA1-201ENST00000288599 ZBBXA8MT70 800 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 GLRX3O76003 335 aaKnown RBP5□□□□□ -1.61
NCOA1-201ENST00000288599 SPDYE2Q495Y8 402 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 STXBP4Q6ZWJ1 553 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5□□□□□ -1.61
NCOA1-201ENST00000288599 ZHX1Q9UKY1 873 aaPredicted RBP5□□□□□ -1.61
NCOA1-201ENST00000288599 ZMYM4Q5VZL5 1548 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 MACROD2A1Z1Q3 448 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 HIP1O00291 1037 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 ZNF197O14709 1029 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 TNNI2P48788 182 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 EIF6P56537 245 aaKnown RBP5□□□□□ -1.61
NCOA1-201ENST00000288599 CCDC110Q8TBZ0 833 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 DDX54Q8TDD1 881 aaKnown RBP5□□□□□ -1.61
NCOA1-201ENST00000288599 WHAMMQ8TF30 809 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 IFT81Q8WYA0 676 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 BUD13Q9BRD0 619 aaKnown RBP eCLIP5□□□□□ -1.614e-8■■■■■ 29.7
NCOA1-201ENST00000288599 LRRFIP2Q9Y608 721 aaKnown RBP5□□□□□ -1.61
NCOA1-201ENST00000288599 OATP04181 439 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 ARID4AP29374 1257 aaPredicted RBP5□□□□□ -1.61
NCOA1-201ENST00000288599 NLRP5P59047 1200 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 SKOR2Q2VWA4 1001 aaPredicted RBP5□□□□□ -1.61
NCOA1-201ENST00000288599 CCDC158Q5M9N0 1113 aa5□□□□□ -1.61
NCOA1-201ENST00000288599 ARHGEF1Q92888 912 aaKnown RBP5□□□□□ -1.61
NCOA1-201ENST00000288599 ABI2Q9NYB9 513 aaPredicted RBP5□□□□□ -1.61
NCOA1-201ENST00000288599 NOL7Q9UMY1 257 aaKnown RBP5□□□□□ -1.61
NCOA1-201ENST00000288599 PRDM15P57071 1507 aaPredicted RBP4.99□□□□□ -1.61
NCOA1-201ENST00000288599 GOLGA6CA6NDK9 693 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 C6orf229H3BNL8 230 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 GIPC1O14908 333 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 GOLGA6DP0CG33 693 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 ATXN3P54252 364 aaPredicted RBP4.99□□□□□ -1.61
NCOA1-201ENST00000288599 TMTC1Q8IUR5 882 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 SPDYE1Q8NFV5 336 aaPredicted RBP4.99□□□□□ -1.61
NCOA1-201ENST00000288599 ZSCAN18Q8TBC5 510 aaPredicted RBP4.99□□□□□ -1.61
NCOA1-201ENST00000288599 TAF4BQ92750 862 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 VEZTQ9HBM0 779 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 LRFN2Q9ULH4 789 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 IKBKGQ9Y6K9 419 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 LDHCP07864 332 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 USP8P40818 1118 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 ARL4DP49703 201 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 MAP2K1Q02750 393 aaPredicted RBP4.99□□□□□ -1.61
NCOA1-201ENST00000288599 ZBTB16Q05516 673 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 TRAF1Q13077 416 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 CALML4Q96GE6 196 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 ZSCAN16Q9H4T2 348 aaPredicted RBP4.99□□□□□ -1.61
NCOA1-201ENST00000288599 PPP6R1Q9UPN7 881 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 DEPDC5O75140 1603 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 IQGAP3Q86VI3 1631 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 PHACTR2O75167 634 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 ADAMTS2O95450 1211 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 TATP17735 454 aaPredicted RBP4.99□□□□□ -1.61
NCOA1-201ENST00000288599 ARL13BQ3SXY8 428 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 RBM26Q5T8P6 1007 aaKnown RBP4.99□□□□□ -1.61
NCOA1-201ENST00000288599 CNNM4Q6P4Q7 775 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 ZNF467Q7Z7K2 595 aaPredicted RBP4.99□□□□□ -1.61
NCOA1-201ENST00000288599 PNMA8AQ86V59 439 aaPredicted RBP4.99□□□□□ -1.61
NCOA1-201ENST00000288599 DCAF11Q8TEB1 546 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 AFAP1L1Q8TED9 768 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 HOOK2Q96ED9 719 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 RPRD1BQ9NQG5 326 aaKnown RBP4.99□□□□□ -1.61
NCOA1-201ENST00000288599 TRIM35Q9UPQ4 493 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.99□□□□□ -1.61
NCOA1-201ENST00000288599 NOL3O60936 208 aaKnown RBP4.99□□□□□ -1.61
NCOA1-201ENST00000288599 HLA-DOAP06340 250 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 PYGLP06737 847 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 CASTP20810 708 aaKnown RBP4.99□□□□□ -1.61
NCOA1-201ENST00000288599 BAG6P46379 1132 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 HS2ST1Q7LGA3 356 aa4.99□□□□□ -1.61
NCOA1-201ENST00000288599 LRRCC1Q9C099 1032 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms