RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 CNTROBQ8N137 903 aa19.74■□□□□ 0.75
PDE6D-201ENST00000287600 ATP6V0A2Q9Y487 856 aa19.74■□□□□ 0.75
PDE6D-201ENST00000287600 AOC3Q16853 763 aa19.73■□□□□ 0.75
PDE6D-201ENST00000287600 DDX21Q9NR30 783 aaKnown RBP eCLIP19.73■□□□□ 0.75
PDE6D-201ENST00000287600 SALL2Q9Y467 1007 aaPredicted RBP19.73■□□□□ 0.75
PDE6D-201ENST00000287600 HCLS1P14317 486 aaPredicted RBP19.72■□□□□ 0.75
PDE6D-201ENST00000287600 SCNN1DP51172 638 aa19.72■□□□□ 0.75
PDE6D-201ENST00000287600 GNAI1P63096 354 aa19.72■□□□□ 0.75
PDE6D-201ENST00000287600 CCDC27Q2M243 656 aa19.72■□□□□ 0.75
PDE6D-201ENST00000287600 HDGFL1Q5TGJ6 251 aa19.72■□□□□ 0.75
PDE6D-201ENST00000287600 MBIPQ9NS73 344 aa19.72■□□□□ 0.75
PDE6D-201ENST00000287600 IFT57Q9NWB7 429 aa19.72■□□□□ 0.75
PDE6D-201ENST00000287600 CHPF2Q9P2E5 772 aa19.72■□□□□ 0.75
PDE6D-201ENST00000287600 TRMT112Q9UI30 125 aaKnown RBP19.72■□□□□ 0.75
PDE6D-201ENST00000287600 SH3TC1Q8TE82 1336 aa19.72■□□□□ 0.75
PDE6D-201ENST00000287600 ZNF853P0CG23 659 aa19.71■□□□□ 0.75
PDE6D-201ENST00000287600 TCIRG1Q13488 830 aa19.71■□□□□ 0.75
PDE6D-201ENST00000287600 WWC1Q8IX03 1113 aa19.71■□□□□ 0.75
PDE6D-201ENST00000287600 SUPT20HQ8NEM7 779 aa19.71■□□□□ 0.75
PDE6D-201ENST00000287600 DDX60Q8IY21 1712 aaKnown RBP19.71■□□□□ 0.75
PDE6D-201ENST00000287600 CCER2I3L3R5 266 aa19.7■□□□□ 0.74
PDE6D-201ENST00000287600 ABCB7O75027 752 aa19.7■□□□□ 0.74
PDE6D-201ENST00000287600 EPS15P42566 896 aa19.7■□□□□ 0.74
PDE6D-201ENST00000287600 VEGFBP49765 207 aa19.7■□□□□ 0.74
PDE6D-201ENST00000287600 DPP8Q6V1X1 898 aaPredicted RBP19.7■□□□□ 0.74
PDE6D-201ENST00000287600 DDX46Q7L014 1031 aaKnown RBP19.7■□□□□ 0.74
PDE6D-201ENST00000287600 BBOX1O75936 387 aa19.69■□□□□ 0.74
PDE6D-201ENST00000287600 ZNF428Q96B54 188 aa19.69■□□□□ 0.74
PDE6D-201ENST00000287600 AIDAQ96BJ3 306 aa19.69■□□□□ 0.74
PDE6D-201ENST00000287600 VPS33BQ9H267 617 aa19.69■□□□□ 0.74
PDE6D-201ENST00000287600 ABT1Q9ULW3 272 aaKnown RBP19.69■□□□□ 0.74
PDE6D-201ENST00000287600 TAF1P21675 1872 aa19.69■□□□□ 0.74
PDE6D-201ENST00000287600 HOXB7P09629 217 aa19.68■□□□□ 0.74
PDE6D-201ENST00000287600 GRAPQ13588 217 aa19.68■□□□□ 0.74
PDE6D-201ENST00000287600 SP8Q8IXZ3 490 aa19.68■□□□□ 0.74
PDE6D-201ENST00000287600 GRAPLQ8TC17 118 aaPredicted RBP19.68■□□□□ 0.74
PDE6D-201ENST00000287600 LRRC37AA6NMS7 1700 aa19.68■□□□□ 0.74
PDE6D-201ENST00000287600 FOXN1O15353 648 aa19.67■□□□□ 0.74
PDE6D-201ENST00000287600 USP50Q70EL3 339 aaPredicted RBP19.67■□□□□ 0.74
PDE6D-201ENST00000287600 MPNDQ8N594 471 aa19.67■□□□□ 0.74
PDE6D-201ENST00000287600 PLBD2Q8NHP8 589 aa19.67■□□□□ 0.74
PDE6D-201ENST00000287600 RTFDC1Q9BY42 306 aaPredicted RBP19.67■□□□□ 0.74
PDE6D-201ENST00000287600 ZNRF3Q9ULT6 936 aa19.67■□□□□ 0.74
PDE6D-201ENST00000287600 TRPM7Q96QT4 1865 aa19.67■□□□□ 0.74
PDE6D-201ENST00000287600 RASSF10A6NK89 507 aa19.66■□□□□ 0.74
PDE6D-201ENST00000287600 DEFB115Q30KQ5 88 aa19.66■□□□□ 0.74
PDE6D-201ENST00000287600 DBF4Q9UBU7 674 aaPredicted RBP19.66■□□□□ 0.74
PDE6D-201ENST00000287600 DUOX1Q9NRD9 1551 aa19.66■□□□□ 0.74
PDE6D-201ENST00000287600 DUSP27Q5VZP5 1158 aa19.65■□□□□ 0.74
PDE6D-201ENST00000287600 MIER1Q8N108 512 aa19.65■□□□□ 0.74
PDE6D-201ENST00000287600 ADARB2Q9NS39 739 aaKnown RBP19.65■□□□□ 0.74
PDE6D-201ENST00000287600 GPRC5DQ9NZD1 345 aa19.65■□□□□ 0.74
PDE6D-201ENST00000287600 ELL2O00472 640 aaPredicted RBP19.64■□□□□ 0.73
PDE6D-201ENST00000287600 CXCL9Q07325 125 aa19.64■□□□□ 0.73
PDE6D-201ENST00000287600 KIAA2012Q0VF49 1180 aa19.64■□□□□ 0.73
PDE6D-201ENST00000287600 ANKRD13DQ6ZTN6 518 aa19.64■□□□□ 0.73
PDE6D-201ENST00000287600 TSR2Q969E8 191 aaKnown RBP19.64■□□□□ 0.73
PDE6D-201ENST00000287600 IL16Q14005 1332 aa19.63■□□□□ 0.73
PDE6D-201ENST00000287600 ATP5J2-PTCD1G3V325 749 aa19.63■□□□□ 0.73
PDE6D-201ENST00000287600 CTCFP49711 727 aaPredicted RBP19.63■□□□□ 0.73
PDE6D-201ENST00000287600 GMPSP49915 693 aaPredicted RBP19.63■□□□□ 0.73
PDE6D-201ENST00000287600 FMR1Q06787 632 aaKnown RBP eCLIP19.63■□□□□ 0.73
PDE6D-201ENST00000287600 CIAPIN1Q6FI81 312 aa19.63■□□□□ 0.73
PDE6D-201ENST00000287600 PAXIP1Q6ZW49 1069 aaPredicted RBP19.63■□□□□ 0.73
PDE6D-201ENST00000287600 TMC4Q7Z404 712 aa19.63■□□□□ 0.73
PDE6D-201ENST00000287600 WDR63Q8IWG1 891 aa19.63■□□□□ 0.73
PDE6D-201ENST00000287600 FAM89AQ96GI7 184 aa19.63■□□□□ 0.73
PDE6D-201ENST00000287600 HYPKQ9NX55 129 aa19.63■□□□□ 0.73
PDE6D-201ENST00000287600 THSD7BQ9C0I4 1608 aa19.62■□□□□ 0.73
PDE6D-201ENST00000287600 CDHR2Q9BYE9 1310 aa19.62■□□□□ 0.73
PDE6D-201ENST00000287600 WDR33Q9C0J8 1336 aaKnown RBP19.62■□□□□ 0.73
PDE6D-201ENST00000287600 RAD17O75943 681 aa19.62■□□□□ 0.73
PDE6D-201ENST00000287600 C8orf58Q8NAV2 365 aa19.62■□□□□ 0.73
PDE6D-201ENST00000287600 ISCA1Q9BUE6 129 aa19.62■□□□□ 0.73
PDE6D-201ENST00000287600 BCL2L13Q9BXK5 485 aa19.62■□□□□ 0.73
PDE6D-201ENST00000287600 TRAF5O00463 557 aa19.61■□□□□ 0.73
PDE6D-201ENST00000287600 TNIP1Q15025 636 aa19.61■□□□□ 0.73
PDE6D-201ENST00000287600 RTL5Q5HYW3 569 aaPredicted RBP19.61■□□□□ 0.73
PDE6D-201ENST00000287600 PRDM10Q9NQV6 1147 aa19.61■□□□□ 0.73
PDE6D-201ENST00000287600 WBP1LQ9NX94 342 aa19.61■□□□□ 0.73
PDE6D-201ENST00000287600 GOLGA2Q08379 1002 aa19.6■□□□□ 0.73
PDE6D-201ENST00000287600 COL4A1P02462 1669 aa19.59■□□□□ 0.73
PDE6D-201ENST00000287600 MAP2K1Q02750 393 aaPredicted RBP19.59■□□□□ 0.73
PDE6D-201ENST00000287600 GRM1Q13255 1194 aa19.59■□□□□ 0.73
PDE6D-201ENST00000287600 RIC3Q7Z5B4 369 aa19.59■□□□□ 0.73
PDE6D-201ENST00000287600 CELF1Q92879 486 aaKnown RBP19.59■□□□□ 0.73
PDE6D-201ENST00000287600 ECE1P42892 770 aa19.58■□□□□ 0.72
PDE6D-201ENST00000287600 SF3B3Q15393 1217 aaKnown RBP19.58■□□□□ 0.72
PDE6D-201ENST00000287600 NSFL1CQ9UNZ2 370 aaKnown RBP19.58■□□□□ 0.72
PDE6D-201ENST00000287600 YDJCA8MPS7 323 aa19.57■□□□□ 0.72
PDE6D-201ENST00000287600 IRS4O14654 1257 aaPredicted RBP19.57■□□□□ 0.72
PDE6D-201ENST00000287600 LBX1P52954 281 aa19.57■□□□□ 0.72
PDE6D-201ENST00000287600 WASHC4Q2M389 1173 aa19.57■□□□□ 0.72
PDE6D-201ENST00000287600 TSPYL6Q8N831 410 aa19.57■□□□□ 0.72
PDE6D-201ENST00000287600 CAPNS2Q96L46 248 aa19.57■□□□□ 0.72
PDE6D-201ENST00000287600 FANCIQ9NVI1 1328 aa19.56■□□□□ 0.72
PDE6D-201ENST00000287600 CST9Q5W186 159 aa19.56■□□□□ 0.72
PDE6D-201ENST00000287600 CYP4F22Q6NT55 531 aa19.56■□□□□ 0.72
PDE6D-201ENST00000287600 TRPM4Q8TD43 1214 aa19.56■□□□□ 0.72
PDE6D-201ENST00000287600 GLIS2Q9BZE0 524 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms