RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 PTPN14Q15678 1187 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 KIF4BQ2VIQ3 1234 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 RBM26Q5T8P6 1007 aaKnown RBP4.64□□□□□ -1.67
SCN3A-201ENST00000283254 HS2ST1Q7LGA3 356 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 GIMAP7Q8NHV1 300 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 SPDYE3A6NKU9 549 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 MCM5P33992 734 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 LMAN1P49257 510 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 CNNM3Q8NE01 707 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 USP25Q9UHP3 1055 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 PUF60Q9UHX1 559 aaKnown RBP4.64□□□□□ -1.67
SCN3A-201ENST00000283254 STX8Q9UNK0 236 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 ANKRD36BQ8N2N9 1353 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 ADAMTS2O95450 1211 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 PDE6BP35913 854 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 UBE4AQ14139 1066 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 HLTFQ14527 1009 aaKnown RBP eCLIP4.64□□□□□ -1.67
SCN3A-201ENST00000283254 RRS1Q15050 365 aaKnown RBP4.64□□□□□ -1.67
SCN3A-201ENST00000283254 ANKRD2Q9GZV1 360 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 MKRN1Q9UHC7 482 aaKnown RBP4.64□□□□□ -1.67
SCN3A-201ENST00000283254 MAST3O60307 1309 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 CCDC155Q8N6L0 562 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 SPINK5Q9NQ38 1064 aaPredicted RBP4.64□□□□□ -1.67
SCN3A-201ENST00000283254 PLB1Q6P1J6 1458 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 ARL1P40616 181 aaPredicted RBP4.64□□□□□ -1.67
SCN3A-201ENST00000283254 UBE3BQ7Z3V4 1068 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 FAM177A1Q8N128 213 aaPredicted RBP4.64□□□□□ -1.67
SCN3A-201ENST00000283254 NLRP3Q96P20 1036 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 PNMA2Q9UL42 364 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 NOD1Q9Y239 953 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 TOPBP1Q92547 1522 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 PSMA7O14818 248 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 GNA11P29992 359 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 RBM25P49756 843 aaKnown RBP4.64□□□□□ -1.67
SCN3A-201ENST00000283254 FLIIQ13045 1269 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 CEP135Q66GS9 1140 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 TRIM47Q96LD4 638 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 IL1RAPL2Q9NP60 686 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 BCAR3O75815 825 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 TSPY3P0CV98 308 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 TSPY8P0CW00 308 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 METAP2P50579 478 aaKnown RBP eCLIP4.64□□□□□ -1.67
SCN3A-201ENST00000283254 TMEM67Q5HYA8 995 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 LDHAL6AQ6ZMR3 332 aa4.64□□□□□ -1.67
SCN3A-201ENST00000283254 ZNF622Q969S3 477 aaKnown RBP eCLIP4.64□□□□□ -1.67
SCN3A-201ENST00000283254 UBAP1LF5GYI3 381 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 LPXNO60711 386 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 TMPOP42166 694 aaKnown RBP4.63□□□□□ -1.67
SCN3A-201ENST00000283254 XPCQ01831 940 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-201ENST00000283254 NOX5Q96PH1 765 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 ZSCAN16Q9H4T2 348 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-201ENST00000283254 EXOC6BQ9Y2D4 811 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 NKTRP30414 1462 aaKnown RBP4.63□□□□□ -1.67
SCN3A-201ENST00000283254 WASLO00401 505 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-201ENST00000283254 GMNNO75496 209 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 ALDH1L1O75891 902 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 GAS8O95995 478 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 LIG1P18858 919 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 NAIPQ13075 1403 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 OTUD6BQ8N6M0 293 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 SETDB2Q96T68 719 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 TCHPQ9BT92 498 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 GOPCQ9HD26 462 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 STK24Q9Y6E0 443 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 IL16Q14005 1332 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 TPTE2Q6XPS3 522 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 ZSCAN30Q86W11 494 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 KCNG1Q9UIX4 513 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 FAM184BQ9ULE4 1060 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 IVNS1ABPQ9Y6Y0 642 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 BICDL2A1A5D9 508 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 SSFA2P28290 1259 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 MICU3Q86XE3 530 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 KCNG4Q8TDN1 519 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 TUBBP07437 444 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 WTAPQ15007 396 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 FERMT3Q86UX7 667 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 FBF1Q8TES7 1133 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 MYD88Q99836 296 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 TMCO5BA8MYB1 307 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 DKC1O60832 514 aaKnown RBP eCLIP4.63□□□□□ -1.67
SCN3A-201ENST00000283254 ZWINTO95229 277 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 RPL13P26373 211 aaKnown RBP4.63□□□□□ -1.67
SCN3A-201ENST00000283254 ANKRD24Q8TF21 1146 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 PRPF31Q8WWY3 499 aaKnown RBP4.63□□□□□ -1.67
SCN3A-201ENST00000283254 GOLGA1Q92805 767 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 CLEC11AQ9Y240 323 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 PARP3Q9Y6F1 533 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 CYLC1P35663 651 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-201ENST00000283254 ANKS4BQ8N8V4 417 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 ODF2LQ9ULJ1 636 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 TIAM1Q13009 1591 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 IL15P40933 162 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-201ENST00000283254 INF2Q27J81 1249 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 CCDC94Q9BW85 323 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-201ENST00000283254 SLC5A4Q9NY91 659 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 TXNDC16Q9P2K2 825 aa4.63□□□□□ -1.67
SCN3A-201ENST00000283254 BIN2Q9UBW5 565 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-201ENST00000283254 FOXO3O43524 673 aa4.62□□□□□ -1.67
SCN3A-201ENST00000283254 BMS1Q14692 1282 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms