RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 GRAPLQ8TC17 118 aaPredicted RBP8.25□□□□□ -1.09
CD44-204ENST00000279452 ZNF526Q8TF50 670 aaPredicted RBP8.25□□□□□ -1.09
CD44-204ENST00000279452 CRAMP1Q96RY5 1269 aa8.25□□□□□ -1.09
CD44-204ENST00000279452 TAOK3Q9H2K8 898 aa8.25□□□□□ -1.09
CD44-204ENST00000279452 CACNA1SQ13698 1873 aa8.25□□□□□ -1.09
CD44-204ENST00000279452 SRCAPQ6ZRS2 3230 aa8.24□□□□□ -1.09
CD44-204ENST00000279452 BRCA1P38398 1863 aaKnown RBP8.24□□□□□ -1.09
CD44-204ENST00000279452 DDX60Q8IY21 1712 aaKnown RBP8.24□□□□□ -1.09
CD44-204ENST00000279452 HOXA10P31260 410 aaPredicted RBP8.24□□□□□ -1.09
CD44-204ENST00000279452 CLUAP1Q96AJ1 413 aa8.24□□□□□ -1.09
CD44-204ENST00000279452 SEC31BQ9NQW1 1179 aa8.24□□□□□ -1.09
CD44-204ENST00000279452 LAMB2P55268 1798 aa8.24□□□□□ -1.09
CD44-204ENST00000279452 H7C1W4 665 aa8.23□□□□□ -1.09
CD44-204ENST00000279452 NFKBIEO00221 500 aa8.23□□□□□ -1.09
CD44-204ENST00000279452 BBOX1O75936 387 aa8.23□□□□□ -1.09
CD44-204ENST00000279452 LMNB1P20700 586 aa8.23□□□□□ -1.09
CD44-204ENST00000279452 CCT4P50991 539 aaKnown RBP8.23□□□□□ -1.09
CD44-204ENST00000279452 SF3B3Q15393 1217 aaKnown RBP8.23□□□□□ -1.09
CD44-204ENST00000279452 FAM161AQ3B820 660 aa8.23□□□□□ -1.09
CD44-204ENST00000279452 TAF7LQ5H9L4 462 aa8.23□□□□□ -1.09
CD44-204ENST00000279452 ZKSCAN2Q63HK3 967 aa8.23□□□□□ -1.09
CD44-204ENST00000279452 ATF7IPQ6VMQ6 1270 aa8.23□□□□□ -1.09
CD44-204ENST00000279452 SLC51AQ86UW1 340 aa8.23□□□□□ -1.09
CD44-204ENST00000279452 ANKRD18AQ8IVF6 992 aa8.23□□□□□ -1.09
CD44-204ENST00000279452 RTKN2Q8IZC4 609 aa8.23□□□□□ -1.09
CD44-204ENST00000279452 CELF1Q92879 486 aaKnown RBP8.23□□□□□ -1.09
CD44-204ENST00000279452 CDC5LQ99459 802 aaKnown RBP8.23□□□□□ -1.09
CD44-204ENST00000279452 GREM2Q9H772 168 aa8.23□□□□□ -1.09
CD44-204ENST00000279452 ZNF277Q9NRM2 450 aaPredicted RBP8.23□□□□□ -1.09
CD44-204ENST00000279452 ATP6V0A2Q9Y487 856 aa8.23□□□□□ -1.09
CD44-204ENST00000279452 ARFGEF1Q9Y6D6 1849 aa8.22□□□□□ -1.09
CD44-204ENST00000279452 ANKRD18BA2A2Z9 1011 aa8.22□□□□□ -1.09
CD44-204ENST00000279452 NBPF7P0C2Y1 421 aaPredicted RBP8.22□□□□□ -1.09
CD44-204ENST00000279452 UBTFL1P0CB47 393 aaPredicted RBP8.22□□□□□ -1.09
CD44-204ENST00000279452 TRIM27P14373 513 aa8.22□□□□□ -1.09
CD44-204ENST00000279452 ITGA6P23229 1130 aa8.22□□□□□ -1.09
CD44-204ENST00000279452 IGHMBP2P38935 993 aaKnown RBP8.22□□□□□ -1.09
CD44-204ENST00000279452 RPS8P62241 208 aaKnown RBP8.22□□□□□ -1.09
CD44-204ENST00000279452 FKBP4Q02790 459 aaKnown RBP eCLIP8.22□□□□□ -1.09
CD44-204ENST00000279452 CC2D2BQ6DHV5 1058 aa8.22□□□□□ -1.09
CD44-204ENST00000279452 DPP8Q6V1X1 898 aaPredicted RBP8.22□□□□□ -1.09
CD44-204ENST00000279452 TMC4Q7Z404 712 aa8.22□□□□□ -1.09
CD44-204ENST00000279452 SUCLG2Q96I99 432 aa8.22□□□□□ -1.09
CD44-204ENST00000279452 ANKIB1Q9P2G1 1089 aa8.22□□□□□ -1.09
CD44-204ENST00000279452 RCAN3Q9UKA8 241 aa8.22□□□□□ -1.09
CD44-204ENST00000279452 NSFL1CQ9UNZ2 370 aaKnown RBP8.22□□□□□ -1.09
CD44-204ENST00000279452 TNNQ9UQP3 1299 aa8.22□□□□□ -1.09
CD44-204ENST00000279452 SLX4Q8IY92 1834 aa8.22□□□□□ -1.09
CD44-204ENST00000279452 C6orf229H3BNL8 230 aa8.21□□□□□ -1.1
CD44-204ENST00000279452 PPIP5K2O43314 1243 aa8.21□□□□□ -1.1
CD44-204ENST00000279452 BRPF1P55201 1214 aaPredicted RBP8.21□□□□□ -1.1
CD44-204ENST00000279452 CASP7P55210 303 aa8.21□□□□□ -1.1
CD44-204ENST00000279452 IFIT5Q13325 482 aaKnown RBP8.21□□□□□ -1.1
CD44-204ENST00000279452 CCDC57Q2TAC2 916 aa8.21□□□□□ -1.1
CD44-204ENST00000279452 LMBR1LQ6UX01 489 aa8.21□□□□□ -1.1
CD44-204ENST00000279452 ITPRIPQ8IWB1 547 aa8.21□□□□□ -1.1
CD44-204ENST00000279452 SP8Q8IXZ3 490 aa8.21□□□□□ -1.1
CD44-204ENST00000279452 LARGE2Q8N3Y3 721 aa8.21□□□□□ -1.1
CD44-204ENST00000279452 MPNDQ8N594 471 aa8.21□□□□□ -1.1
CD44-204ENST00000279452 TTLL11Q8NHH1 800 aa8.21□□□□□ -1.1
CD44-204ENST00000279452 C7orf43Q8WVR3 580 aa8.21□□□□□ -1.1
CD44-204ENST00000279452 ARHGAP45Q92619 1136 aa8.21□□□□□ -1.1
CD44-204ENST00000279452 MPHOSPH8Q99549 860 aa8.21□□□□□ -1.1
CD44-204ENST00000279452 G3V3G9 751 aa8.2□□□□□ -1.1
CD44-204ENST00000279452 IARSP41252 1262 aaKnown RBP8.2□□□□□ -1.1
CD44-204ENST00000279452 FOXO4P98177 505 aa8.2□□□□□ -1.1
CD44-204ENST00000279452 AOC3Q16853 763 aa8.2□□□□□ -1.1
CD44-204ENST00000279452 GRIPAP1Q4V328 841 aa8.2□□□□□ -1.1
CD44-204ENST00000279452 DCAF8Q5TAQ9 597 aa8.2□□□□□ -1.1
CD44-204ENST00000279452 SUPT20HQ8NEM7 779 aa8.2□□□□□ -1.1
CD44-204ENST00000279452 JDP2Q8WYK2 163 aa8.2□□□□□ -1.1
CD44-204ENST00000279452 PLA2G12BQ9BX93 195 aa8.2□□□□□ -1.1
CD44-204ENST00000279452 RNF39Q9H2S5 420 aa8.2□□□□□ -1.1
CD44-204ENST00000279452 BICC1Q9H694 974 aaKnown RBP8.2□□□□□ -1.1
CD44-204ENST00000279452 GPBP1L1Q9HC44 474 aaPredicted RBP8.2□□□□□ -1.1
CD44-204ENST00000279452 LTBP3Q9NS15 1303 aa8.2□□□□□ -1.1
CD44-204ENST00000279452 CACNA1FO60840 1977 aa8.19□□□□□ -1.1
CD44-204ENST00000279452 COL4A1P02462 1669 aa8.19□□□□□ -1.1
CD44-204ENST00000279452 RIMBP2O15034 1052 aa8.19□□□□□ -1.1
CD44-204ENST00000279452 UFL1O94874 794 aa8.19□□□□□ -1.1
CD44-204ENST00000279452 KCNJ4P48050 445 aa8.19□□□□□ -1.1
CD44-204ENST00000279452 PRELPP51888 382 aa8.19□□□□□ -1.1
CD44-204ENST00000279452 GPSM2P81274 684 aa8.19□□□□□ -1.1
CD44-204ENST00000279452 EPHA10Q5JZY3 1008 aa8.19□□□□□ -1.1
CD44-204ENST00000279452 NIM1KQ8IY84 436 aa8.19□□□□□ -1.1
CD44-204ENST00000279452 DZIP1LQ8IYY4 767 aaKnown RBP8.19□□□□□ -1.1
CD44-204ENST00000279452 TMEM57Q8N5G2 664 aa8.19□□□□□ -1.1
CD44-204ENST00000279452 ZNF784Q8NCA9 323 aaPredicted RBP8.19□□□□□ -1.1
CD44-204ENST00000279452 PSMD1Q99460 953 aa8.19□□□□□ -1.1
CD44-204ENST00000279452 MEIS3Q99687 375 aa8.19□□□□□ -1.1
CD44-204ENST00000279452 USP44Q9H0E7 712 aa8.19□□□□□ -1.1
CD44-204ENST00000279452 CNNM1Q9NRU3 951 aa8.19□□□□□ -1.1
CD44-204ENST00000279452 HDAC5Q9UQL6 1122 aa8.19□□□□□ -1.1
CD44-204ENST00000279452 TIAM2Q8IVF5 1701 aa8.19□□□□□ -1.1
CD44-204ENST00000279452 KDM2BQ8NHM5 1336 aa8.19□□□□□ -1.1
CD44-204ENST00000279452 RTL9Q8NET4 1388 aa8.19□□□□□ -1.1
CD44-204ENST00000279452 PLIN1O60240 522 aa8.18□□□□□ -1.1
CD44-204ENST00000279452 CSF1RP07333 972 aa8.18□□□□□ -1.1
CD44-204ENST00000279452 GNAI3P08754 354 aa8.18□□□□□ -1.1
CD44-204ENST00000279452 MS4A1P11836 297 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms