RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 INTS4Q96HW7 963 aaKnown RBP12.49□□□□□ -0.41
UPF3B-201ENST00000276201 BCL2L12Q9HB09 334 aa12.49□□□□□ -0.41
UPF3B-201ENST00000276201 TBC1D2BQ9UPU7 963 aa12.48□□□□□ -0.41
UPF3B-201ENST00000276201 TSPYL6Q8N831 410 aa12.48□□□□□ -0.41
UPF3B-201ENST00000276201 SYT17Q9BSW7 474 aa12.48□□□□□ -0.41
UPF3B-201ENST00000276201 C1orf115Q9H7X2 142 aa12.48□□□□□ -0.41
UPF3B-201ENST00000276201 R3HCC1Q9Y3T6 440 aaKnown RBP12.48□□□□□ -0.41
UPF3B-201ENST00000276201 BCORQ6W2J9 1755 aa12.47□□□□□ -0.41
UPF3B-201ENST00000276201 UQCRHLA0A096LP55 91 aa12.47□□□□□ -0.41
UPF3B-201ENST00000276201 ERC2O15083 957 aa12.47□□□□□ -0.41
UPF3B-201ENST00000276201 BRD1O95696 1058 aa12.47□□□□□ -0.41
UPF3B-201ENST00000276201 UQCRHP07919 91 aa12.47□□□□□ -0.41
UPF3B-201ENST00000276201 ANAPC15P60006 121 aa12.47□□□□□ -0.41
UPF3B-201ENST00000276201 SYAP1Q96A49 352 aaPredicted RBP12.47□□□□□ -0.41
UPF3B-201ENST00000276201 CAMTA2O94983 1202 aa12.47□□□□□ -0.41
UPF3B-201ENST00000276201 SDSP20132 328 aa12.47□□□□□ -0.41
UPF3B-201ENST00000276201 DDR1Q08345 913 aa12.47□□□□□ -0.41
UPF3B-201ENST00000276201 DZIP3Q86Y13 1208 aaKnown RBP12.47□□□□□ -0.41
UPF3B-201ENST00000276201 FAM184AQ8NB25 1140 aa12.47□□□□□ -0.41
UPF3B-201ENST00000276201 TMEM63CQ9P1W3 806 aa12.47□□□□□ -0.41
UPF3B-201ENST00000276201 PTPRCP08575 1304 aa12.47□□□□□ -0.41
UPF3B-201ENST00000276201 CACNA1FO60840 1977 aa12.46□□□□□ -0.41
UPF3B-201ENST00000276201 PRPF40AO75400 957 aaKnown RBP12.46□□□□□ -0.41
UPF3B-201ENST00000276201 EIF2S2P20042 333 aaKnown RBP12.46□□□□□ -0.41
UPF3B-201ENST00000276201 PRDM4Q9UKN5 801 aa12.46□□□□□ -0.41
UPF3B-201ENST00000276201 TM4SF1P30408 202 aa12.45□□□□□ -0.42
UPF3B-201ENST00000276201 CEP85Q6P2H3 762 aa12.45□□□□□ -0.42
UPF3B-201ENST00000276201 HOXB7P09629 217 aa12.45□□□□□ -0.42
UPF3B-201ENST00000276201 MYL6BP14649 208 aa12.45□□□□□ -0.42
UPF3B-201ENST00000276201 NFIXQ14938 502 aa12.45□□□□□ -0.42
UPF3B-201ENST00000276201 PDIA6Q15084 440 aa12.45□□□□□ -0.42
UPF3B-201ENST00000276201 NLGN2Q8NFZ4 835 aa12.45□□□□□ -0.42
UPF3B-201ENST00000276201 NECTIN2Q92692 538 aa12.45□□□□□ -0.42
UPF3B-201ENST00000276201 PRIMPOLQ96LW4 560 aa12.45□□□□□ -0.42
UPF3B-201ENST00000276201 POLRMTO00411 1230 aaKnown RBP12.44□□□□□ -0.42
UPF3B-201ENST00000276201 GTF2F1P35269 517 aaKnown RBP eCLIP12.44□□□□□ -0.42
UPF3B-201ENST00000276201 PROSER3Q2NL68 480 aa12.44□□□□□ -0.42
UPF3B-201ENST00000276201 LRP10Q7Z4F1 713 aa12.44□□□□□ -0.42
UPF3B-201ENST00000276201 TMEM87AQ8NBN3 555 aa12.44□□□□□ -0.42
UPF3B-201ENST00000276201 PARP3Q9Y6F1 533 aa12.44□□□□□ -0.42
UPF3B-201ENST00000276201 C10orf71Q711Q0 1435 aa12.44□□□□□ -0.42
UPF3B-201ENST00000276201 NCLP19338 710 aaKnown RBP12.44□□□□□ -0.42
UPF3B-201ENST00000276201 PKP1Q13835 747 aa12.44□□□□□ -0.42
UPF3B-201ENST00000276201 C8orf58Q8NAV2 365 aa12.44□□□□□ -0.42
UPF3B-201ENST00000276201 TSPY26PQ9H489 355 aa12.44□□□□□ -0.42
UPF3B-201ENST00000276201 CD2APQ9Y5K6 639 aa12.44□□□□□ -0.42
UPF3B-201ENST00000276201 KIF13BQ9NQT8 1826 aa12.44□□□□□ -0.42
UPF3B-201ENST00000276201 ANXA1P04083 346 aa12.43□□□□□ -0.42
UPF3B-201ENST00000276201 HDGFL1Q5TGJ6 251 aa12.43□□□□□ -0.42
UPF3B-201ENST00000276201 TBC1D9BQ66K14 1250 aa12.43□□□□□ -0.42
UPF3B-201ENST00000276201 ZGPATQ8N5A5 531 aaKnown RBP12.43□□□□□ -0.42
UPF3B-201ENST00000276201 MYRIPQ8NFW9 859 aa12.43□□□□□ -0.42
UPF3B-201ENST00000276201 KIAA2012Q0VF49 1180 aa12.43□□□□□ -0.42
UPF3B-201ENST00000276201 UTP14CQ5TAP6 766 aaKnown RBP12.43□□□□□ -0.42
UPF3B-201ENST00000276201 TTLL7Q6ZT98 887 aa12.43□□□□□ -0.42
UPF3B-201ENST00000276201 NRXN2Q9P2S2 1712 aa12.42□□□□□ -0.42
UPF3B-201ENST00000276201 ELL2O00472 640 aaPredicted RBP12.42□□□□□ -0.42
UPF3B-201ENST00000276201 HMMRO75330 724 aa12.42□□□□□ -0.42
UPF3B-201ENST00000276201 HMGN5P82970 282 aaKnown RBP12.42□□□□□ -0.42
UPF3B-201ENST00000276201 BICDL1Q6ZP65 573 aa12.42□□□□□ -0.42
UPF3B-201ENST00000276201 CHPF2Q9P2E5 772 aa12.42□□□□□ -0.42
UPF3B-201ENST00000276201 RBM27Q9P2N5 1060 aaKnown RBP12.42□□□□□ -0.42
UPF3B-201ENST00000276201 AFDNP55196 1824 aaKnown RBP12.42□□□□□ -0.42
UPF3B-201ENST00000276201 SALL3Q9BXA9 1300 aa12.42□□□□□ -0.42
UPF3B-201ENST00000276201 LETM1O95202 739 aaPredicted RBP12.42□□□□□ -0.42
UPF3B-201ENST00000276201 KIAA1551Q9HCM1 1747 aa12.42□□□□□ -0.42
UPF3B-201ENST00000276201 SYCE3A1L190 88 aa12.41□□□□□ -0.42
UPF3B-201ENST00000276201 RGL2O15211 777 aa12.41□□□□□ -0.42
UPF3B-201ENST00000276201 TMX3Q96JJ7 454 aa12.41□□□□□ -0.42
UPF3B-201ENST00000276201 DDX21Q9NR30 783 aaKnown RBP eCLIP12.41□□□□□ -0.42
UPF3B-201ENST00000276201 AOX1Q06278 1338 aa12.41□□□□□ -0.42
UPF3B-201ENST00000276201 MAP3K15Q6ZN16 1313 aa12.41□□□□□ -0.42
UPF3B-201ENST00000276201 HLFQ16534 295 aa12.41□□□□□ -0.42
UPF3B-201ENST00000276201 CLEC4GQ6UXB4 293 aa12.41□□□□□ -0.42
UPF3B-201ENST00000276201 KIF6Q6ZMV9 814 aa12.41□□□□□ -0.42
UPF3B-201ENST00000276201 CCDC94Q9BW85 323 aaPredicted RBP12.41□□□□□ -0.42
UPF3B-201ENST00000276201 PXDNLA1KZ92 1463 aa12.4□□□□□ -0.42
UPF3B-201ENST00000276201 SERPINB2P05120 415 aa12.4□□□□□ -0.42
UPF3B-201ENST00000276201 MCCP23508 829 aa12.4□□□□□ -0.42
UPF3B-201ENST00000276201 RBM10P98175 930 aaKnown RBP12.4□□□□□ -0.42
UPF3B-201ENST00000276201 PIBF1Q8WXW3 757 aa12.4□□□□□ -0.42
UPF3B-201ENST00000276201 SPTLC3Q9NUV7 552 aa12.4□□□□□ -0.42
UPF3B-201ENST00000276201 FAM13BQ9NYF5 915 aa12.4□□□□□ -0.42
UPF3B-201ENST00000276201 ZNF652Q9Y2D9 606 aa12.4□□□□□ -0.42
UPF3B-201ENST00000276201 CARMIL3Q8ND23 1372 aa12.4□□□□□ -0.42
UPF3B-201ENST00000276201 ERVV-1B6SEH8 477 aa12.4□□□□□ -0.43
UPF3B-201ENST00000276201 C16orf71Q8IYS4 520 aaPredicted RBP12.4□□□□□ -0.43
UPF3B-201ENST00000276201 XAGE3Q8WTP9 111 aa12.4□□□□□ -0.43
UPF3B-201ENST00000276201 ZBTB3Q9H5J0 574 aa12.4□□□□□ -0.43
UPF3B-201ENST00000276201 NUP98P52948 1817 aa12.39□□□□□ -0.43
UPF3B-201ENST00000276201 TCHHQ07283 1943 aa12.39□□□□□ -0.43
UPF3B-201ENST00000276201 PDE1AP54750 535 aa12.39□□□□□ -0.43
UPF3B-201ENST00000276201 DBF4Q9UBU7 674 aaPredicted RBP12.39□□□□□ -0.43
UPF3B-201ENST00000276201 COPS6Q7L5N1 327 aa12.38□□□□□ -0.43
UPF3B-201ENST00000276201 SETDB2Q96T68 719 aa12.38□□□□□ -0.43
UPF3B-201ENST00000276201 ESYT1Q9BSJ8 1104 aa12.38□□□□□ -0.43
UPF3B-201ENST00000276201 AIMP1Q12904 312 aaKnown RBP12.38□□□□□ -0.43
UPF3B-201ENST00000276201 OTUD7AQ8TE49 926 aaPredicted RBP12.38□□□□□ -0.43
UPF3B-201ENST00000276201 NSFL1CQ9UNZ2 370 aaKnown RBP12.38□□□□□ -0.43
UPF3B-201ENST00000276201 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms