RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 PRDM11Q9NQV5 511 aa13.97□□□□□ -0.17
LRTM1-201ENST00000273286 CRYBG1Q9Y4K1 1723 aa13.96□□□□□ -0.17
LRTM1-201ENST00000273286 SPATA31A5Q5VU36 1347 aa13.96□□□□□ -0.18
LRTM1-201ENST00000273286 SPATA31A7Q8IWB4 1347 aa13.96□□□□□ -0.18
LRTM1-201ENST00000273286 POLR3AO14802 1390 aaPredicted RBP13.96□□□□□ -0.18
LRTM1-201ENST00000273286 STK17AQ9UEE5 414 aa13.95□□□□□ -0.18
LRTM1-201ENST00000273286 PPFIA3O75145 1194 aa13.94□□□□□ -0.18
LRTM1-201ENST00000273286 DEFB132Q7Z7B7 95 aa13.94□□□□□ -0.18
LRTM1-201ENST00000273286 CDK19Q9BWU1 502 aa13.94□□□□□ -0.18
LRTM1-201ENST00000273286 SNRKQ9NRH2 765 aa13.94□□□□□ -0.18
LRTM1-201ENST00000273286 NDUFB9Q9Y6M9 179 aa13.94□□□□□ -0.18
LRTM1-201ENST00000273286 LILRA1O75019 489 aa13.93□□□□□ -0.18
LRTM1-201ENST00000273286 ADH1AP07327 375 aa13.93□□□□□ -0.18
LRTM1-201ENST00000273286 INSM2Q96T92 566 aaPredicted RBP13.93□□□□□ -0.18
LRTM1-201ENST00000273286 ZNF395Q9H8N7 513 aaPredicted RBP13.93□□□□□ -0.18
LRTM1-201ENST00000273286 BRD4O60885 1362 aaPredicted RBP13.93□□□□□ -0.18
LRTM1-201ENST00000273286 TOPAZ1Q8N9V7 1692 aa13.93□□□□□ -0.18
LRTM1-201ENST00000273286 VSIG8P0DPA2 414 aa13.92□□□□□ -0.18
LRTM1-201ENST00000273286 RGPD1P0DJD0 1748 aa13.92□□□□□ -0.18
LRTM1-201ENST00000273286 THSD7AQ9UPZ6 1657 aa13.91□□□□□ -0.18
LRTM1-201ENST00000273286 PHRF1Q9P1Y6 1649 aaKnown RBP13.91□□□□□ -0.18
LRTM1-201ENST00000273286 KIAA0232Q92628 1395 aa13.91□□□□□ -0.18
LRTM1-201ENST00000273286 GPR37L1O60883 481 aa13.91□□□□□ -0.18
LRTM1-201ENST00000273286 GIGYF1O75420 1035 aaPredicted RBP13.91□□□□□ -0.18
LRTM1-201ENST00000273286 CTSOP43234 321 aaPredicted RBP13.91□□□□□ -0.18
LRTM1-201ENST00000273286 NR1H3Q13133 447 aa13.91□□□□□ -0.18
LRTM1-201ENST00000273286 NBPF8Q3BBV2 869 aa13.91□□□□□ -0.18
LRTM1-201ENST00000273286 POLMQ9NP87 494 aaPredicted RBP13.91□□□□□ -0.18
LRTM1-201ENST00000273286 CYLDQ9NQC7 956 aa13.91□□□□□ -0.18
LRTM1-201ENST00000273286 DISP2A7MBM2 1401 aa13.91□□□□□ -0.18
LRTM1-201ENST00000273286 ACEP12821 1306 aa13.9□□□□□ -0.18
LRTM1-201ENST00000273286 SPATA31A1Q5TZJ5 1347 aa13.9□□□□□ -0.18
LRTM1-201ENST00000273286 APBB1O00213 710 aa13.9□□□□□ -0.18
LRTM1-201ENST00000273286 ADD1P35611 737 aaKnown RBP13.9□□□□□ -0.18
LRTM1-201ENST00000273286 PTSQ03393 145 aa13.9□□□□□ -0.19
LRTM1-201ENST00000273286 LRP5O75197 1615 aa13.89□□□□□ -0.19
LRTM1-201ENST00000273286 CPDO75976 1380 aa13.89□□□□□ -0.19
LRTM1-201ENST00000273286 CENPJQ9HC77 1338 aaPredicted RBP13.89□□□□□ -0.19
LRTM1-201ENST00000273286 NLRP13Q86W25 1043 aa13.89□□□□□ -0.19
LRTM1-201ENST00000273286 ABTB2Q8N961 1025 aa13.89□□□□□ -0.19
LRTM1-201ENST00000273286 SRPK2P78362 688 aaKnown RBP13.88□□□□□ -0.19
LRTM1-201ENST00000273286 FAM196AQ6ZSG2 479 aa13.88□□□□□ -0.19
LRTM1-201ENST00000273286 PARD3Q8TEW0 1356 aa13.87□□□□□ -0.19
LRTM1-201ENST00000273286 USP19O94966 1318 aa13.87□□□□□ -0.19
LRTM1-201ENST00000273286 EVA1CP58658 441 aa13.87□□□□□ -0.19
LRTM1-201ENST00000273286 ZC3H6P61129 1189 aaKnown RBP13.87□□□□□ -0.19
LRTM1-201ENST00000273286 STRN4Q9NRL3 753 aa13.87□□□□□ -0.19
LRTM1-201ENST00000273286 ZNF330Q9Y3S2 320 aaPredicted RBP13.87□□□□□ -0.19
LRTM1-201ENST00000273286 PPIP5K1Q6PFW1 1433 aa13.87□□□□□ -0.19
LRTM1-201ENST00000273286 SSH2Q76I76 1423 aa13.87□□□□□ -0.19
LRTM1-201ENST00000273286 NRKQ7Z2Y5 1582 aa13.86□□□□□ -0.19
LRTM1-201ENST00000273286 PTGIRP43119 386 aa13.86□□□□□ -0.19
LRTM1-201ENST00000273286 CHRNA2Q15822 529 aa13.86□□□□□ -0.19
LRTM1-201ENST00000273286 KDF1Q8NAX2 398 aaPredicted RBP13.86□□□□□ -0.19
LRTM1-201ENST00000273286 THRAP3Q9Y2W1 955 aaKnown RBP13.86□□□□□ -0.19
LRTM1-201ENST00000273286 NBPF1Q3BBV0 1214 aa13.85□□□□□ -0.19
LRTM1-201ENST00000273286 RNF217Q8TC41 542 aa13.85□□□□□ -0.19
LRTM1-201ENST00000273286 PDE3BQ13370 1112 aa13.84□□□□□ -0.19
LRTM1-201ENST00000273286 ZSCAN1Q8NBB4 408 aa13.84□□□□□ -0.19
LRTM1-201ENST00000273286 GCP02774 474 aa13.83□□□□□ -0.2
LRTM1-201ENST00000273286 NUTM2GQ5VZR2 741 aa13.83□□□□□ -0.2
LRTM1-201ENST00000273286 TCP11L2Q8N4U5 519 aa13.83□□□□□ -0.2
LRTM1-201ENST00000273286 CCDC155Q8N6L0 562 aa13.83□□□□□ -0.2
LRTM1-201ENST00000273286 ZNF592Q92610 1267 aa13.83□□□□□ -0.2
LRTM1-201ENST00000273286 TNS1Q9HBL0 1735 aaKnown RBP13.83□□□□□ -0.2
LRTM1-201ENST00000273286 LMO7Q8WWI1 1683 aa13.83□□□□□ -0.2
LRTM1-201ENST00000273286 QRICH2Q9H0J4 1663 aa13.83□□□□□ -0.2
LRTM1-201ENST00000273286 CAMTA1Q9Y6Y1 1673 aa13.83□□□□□ -0.2
LRTM1-201ENST00000273286 PRKCSHP14314 528 aaPredicted RBP13.82□□□□□ -0.2
LRTM1-201ENST00000273286 LORP23490 312 aaPredicted RBP13.82□□□□□ -0.2
LRTM1-201ENST00000273286 MCCD1P59942 119 aaPredicted RBP13.82□□□□□ -0.2
LRTM1-201ENST00000273286 RNF20Q5VTR2 975 aa13.82□□□□□ -0.2
LRTM1-201ENST00000273286 FOXD4L5Q5VV16 416 aaPredicted RBP13.82□□□□□ -0.2
LRTM1-201ENST00000273286 EVC2Q86UK5 1308 aa13.82□□□□□ -0.2
LRTM1-201ENST00000273286 USP6P35125 1406 aa13.82□□□□□ -0.2
LRTM1-201ENST00000273286 FAM182BQ5T319 152 aa13.81□□□□□ -0.2
LRTM1-201ENST00000273286 USP35Q9P2H5 1018 aa13.81□□□□□ -0.2
LRTM1-201ENST00000273286 TBC1D2BQ9UPU7 963 aa13.81□□□□□ -0.2
LRTM1-201ENST00000273286 CRB1P82279 1406 aa13.8□□□□□ -0.2
LRTM1-201ENST00000273286 COL5A2P05997 1499 aaPredicted RBP13.8□□□□□ -0.2
LRTM1-201ENST00000273286 AATKQ6ZMQ8 1374 aa13.8□□□□□ -0.2
LRTM1-201ENST00000273286 SLC35F4A4IF30 521 aa13.8□□□□□ -0.2
LRTM1-201ENST00000273286 TRIM37O94972 964 aa13.8□□□□□ -0.2
LRTM1-201ENST00000273286 LARP1Q6PKG0 1096 aaKnown RBP13.8□□□□□ -0.2
LRTM1-201ENST00000273286 CAMKK2Q96RR4 588 aa13.8□□□□□ -0.2
LRTM1-201ENST00000273286 FAM181BA6NEQ2 426 aa13.79□□□□□ -0.2
LRTM1-201ENST00000273286 ATP5J2-PTCD1G3V325 749 aa13.79□□□□□ -0.2
LRTM1-201ENST00000273286 APBA3O96018 575 aa13.79□□□□□ -0.2
LRTM1-201ENST00000273286 ERVK-9P63128 1117 aa13.79□□□□□ -0.2
LRTM1-201ENST00000273286 CC2D2BQ6DHV5 1058 aa13.79□□□□□ -0.2
LRTM1-201ENST00000273286 L3MBTL2Q969R5 705 aa13.79□□□□□ -0.2
LRTM1-201ENST00000273286 CABP1Q9NZU7 370 aa13.79□□□□□ -0.2
LRTM1-201ENST00000273286 SLIT3O75094 1523 aa13.79□□□□□ -0.2
LRTM1-201ENST00000273286 EZH2Q15910 746 aaKnown RBP13.78□□□□□ -0.2
LRTM1-201ENST00000273286 KCNH5Q8NCM2 988 aa13.78□□□□□ -0.2
LRTM1-201ENST00000273286 PCDHB11Q9Y5F2 797 aa13.78□□□□□ -0.2
LRTM1-201ENST00000273286 PARP4Q9UKK3 1724 aaKnown RBP13.78□□□□□ -0.2
LRTM1-201ENST00000273286 TRPM1Q7Z4N2 1603 aa13.77□□□□□ -0.2
LRTM1-201ENST00000273286 ROCK2O75116 1388 aaKnown RBP13.77□□□□□ -0.2
LRTM1-201ENST00000273286 R3HDM1Q15032 1099 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms