RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 GKAP1Q5VSY0 366 aaPredicted RBP12.69□□□□□ -0.38
CHFR-201ENST00000266880 CCDC110Q8TBZ0 833 aa12.69□□□□□ -0.38
CHFR-201ENST00000266880 RAB34Q9BZG1 259 aa12.69□□□□□ -0.38
CHFR-201ENST00000266880 CCDC186Q7Z3E2 898 aa12.69□□□□□ -0.38
CHFR-201ENST00000266880 POLR3DP05423 398 aaPredicted RBP12.69□□□□□ -0.38
CHFR-201ENST00000266880 GCKP35557 465 aa12.69□□□□□ -0.38
CHFR-201ENST00000266880 ZNF365Q70YC5 407 aa12.69□□□□□ -0.38
CHFR-201ENST00000266880 CCDC50Q8IVM0 306 aa12.69□□□□□ -0.38
CHFR-201ENST00000266880 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.69□□□□□ -0.384e-7■■■■□ 20.4
CHFR-201ENST00000266880 CALML4Q96GE6 196 aa12.69□□□□□ -0.38
CHFR-201ENST00000266880 TTC12Q9H892 705 aaPredicted RBP12.69□□□□□ -0.38
CHFR-201ENST00000266880 HSPA1LP34931 641 aa12.69□□□□□ -0.38
CHFR-201ENST00000266880 LCA5Q86VQ0 697 aa12.69□□□□□ -0.38
CHFR-201ENST00000266880 WDR63Q8IWG1 891 aa12.69□□□□□ -0.38
CHFR-201ENST00000266880 ERCC5P28715 1186 aaPredicted RBP12.68□□□□□ -0.38
CHFR-201ENST00000266880 ZC3H6P61129 1189 aaKnown RBP12.68□□□□□ -0.38
CHFR-201ENST00000266880 NEDD9Q14511 834 aa12.68□□□□□ -0.38
CHFR-201ENST00000266880 PPP2R5AQ15172 486 aa12.68□□□□□ -0.38
CHFR-201ENST00000266880 RRAGBQ5VZM2 374 aa12.68□□□□□ -0.38
CHFR-201ENST00000266880 CYLC1P35663 651 aaPredicted RBP12.68□□□□□ -0.38
CHFR-201ENST00000266880 WHAMMP3Q1A5X7 153 aa12.68□□□□□ -0.38
CHFR-201ENST00000266880 AOPEPQ8N6M6 819 aa12.68□□□□□ -0.38
CHFR-201ENST00000266880 GOLGA8AA7E2F4 631 aa12.68□□□□□ -0.38
CHFR-201ENST00000266880 RANBP6O60518 1105 aaKnown RBP12.68□□□□□ -0.38
CHFR-201ENST00000266880 CRCPO75575 148 aa12.68□□□□□ -0.38
CHFR-201ENST00000266880 TRMT1LQ7Z2T5 733 aaKnown RBP12.68□□□□□ -0.38
CHFR-201ENST00000266880 UAP1Q16222 522 aaPredicted RBP12.68□□□□□ -0.38
CHFR-201ENST00000266880 PLEKHO1Q53GL0 409 aaPredicted RBP12.68□□□□□ -0.38
CHFR-201ENST00000266880 CUL5Q93034 780 aa12.68□□□□□ -0.38
CHFR-201ENST00000266880 MRFAP1L1Q96HT8 127 aa12.68□□□□□ -0.38
CHFR-201ENST00000266880 FRMD3A2A2Y4 597 aa12.68□□□□□ -0.38
CHFR-201ENST00000266880 BICD1Q96G01 975 aa12.68□□□□□ -0.38
CHFR-201ENST00000266880 XAB2Q9HCS7 855 aaKnown RBP12.68□□□□□ -0.38
CHFR-201ENST00000266880 NKIRAS1Q9NYS0 192 aa12.68□□□□□ -0.38
CHFR-201ENST00000266880 USH1CQ9Y6N9 552 aa12.68□□□□□ -0.38
CHFR-201ENST00000266880 LRSAM1Q6UWE0 723 aa12.68□□□□□ -0.38
CHFR-201ENST00000266880 LZTFL1Q9NQ48 299 aa12.68□□□□□ -0.38
CHFR-201ENST00000266880 FCHSD2O94868 740 aa12.68□□□□□ -0.38
CHFR-201ENST00000266880 NBPF8Q3BBV2 869 aa12.68□□□□□ -0.38
CHFR-201ENST00000266880 U2AF2P26368 475 aaKnown RBP eCLIP12.68□□□□□ -0.382e-6■■■■■ 27.8
CHFR-201ENST00000266880 ALDH3A1P30838 453 aa12.68□□□□□ -0.38
CHFR-201ENST00000266880 CTCFLQ8NI51 663 aaPredicted RBP12.68□□□□□ -0.38
CHFR-201ENST00000266880 PLVAPQ9BX97 442 aa12.68□□□□□ -0.38
CHFR-201ENST00000266880 NLRP5P59047 1200 aa12.67□□□□□ -0.38
CHFR-201ENST00000266880 STRN4Q9NRL3 753 aa12.67□□□□□ -0.38
CHFR-201ENST00000266880 ATP6V1AP38606 617 aa12.67□□□□□ -0.38
CHFR-201ENST00000266880 SYKP43405 635 aa12.67□□□□□ -0.38
CHFR-201ENST00000266880 AFMP43652 599 aa12.67□□□□□ -0.38
CHFR-201ENST00000266880 ARHGEF2Q92974 986 aaKnown RBP12.67□□□□□ -0.38
CHFR-201ENST00000266880 POTEDQ86YR6 584 aa12.67□□□□□ -0.38
CHFR-201ENST00000266880 PPP2R3AQ06190 1150 aa12.67□□□□□ -0.38
CHFR-201ENST00000266880 SF3A3Q12874 501 aaKnown RBP eCLIP12.67□□□□□ -0.382e-6■■■■□ 26.3
CHFR-201ENST00000266880 SF3B2Q13435 895 aaKnown RBP12.67□□□□□ -0.38
CHFR-201ENST00000266880 CCDC38Q502W7 563 aa12.67□□□□□ -0.38
CHFR-201ENST00000266880 LRRC45Q96CN5 670 aa12.67□□□□□ -0.38
CHFR-201ENST00000266880 GUCA1BQ9UMX6 200 aa12.67□□□□□ -0.38
CHFR-201ENST00000266880 TRIM68Q6AZZ1 485 aa12.67□□□□□ -0.38
CHFR-201ENST00000266880 BOLA2Q9H3K6 86 aa12.67□□□□□ -0.38
CHFR-201ENST00000266880 ZNF569Q5MCW4 686 aa12.67□□□□□ -0.38
CHFR-201ENST00000266880 CEP126Q9P2H0 1117 aa12.67□□□□□ -0.38
CHFR-201ENST00000266880 XRCC6P12956 609 aaKnown RBP eCLIP12.67□□□□□ -0.386e-7■■■■■ 28.8
CHFR-201ENST00000266880 DACT3Q96B18 629 aaPredicted RBP12.67□□□□□ -0.38
CHFR-201ENST00000266880 BIRC2Q13490 618 aa12.66□□□□□ -0.38
CHFR-201ENST00000266880 PPP1R7Q15435 360 aa12.66□□□□□ -0.38
CHFR-201ENST00000266880 MCUR1Q96AQ8 359 aa12.66□□□□□ -0.38
CHFR-201ENST00000266880 TRIM4Q9C037 500 aa12.66□□□□□ -0.38
CHFR-201ENST00000266880 NAPBQ9H115 298 aa12.66□□□□□ -0.38
CHFR-201ENST00000266880 CCDC88BA6NC98 1476 aa12.66□□□□□ -0.38
CHFR-201ENST00000266880 ATP2A1O14983 1001 aa12.66□□□□□ -0.38
CHFR-201ENST00000266880 TTF1Q15361 905 aaPredicted RBP12.66□□□□□ -0.38
CHFR-201ENST00000266880 MAP7Q14244 749 aa12.66□□□□□ -0.38
CHFR-201ENST00000266880 TACO1Q9BSH4 297 aaKnown RBP12.66□□□□□ -0.38
CHFR-201ENST00000266880 PNMA8AQ86V59 439 aaPredicted RBP12.66□□□□□ -0.38
CHFR-201ENST00000266880 MYCNP04198 464 aaPredicted RBP12.65□□□□□ -0.38
CHFR-201ENST00000266880 CCDC102BQ68D86 513 aa12.65□□□□□ -0.38
CHFR-201ENST00000266880 RUFY3Q7L099 469 aa12.65□□□□□ -0.38
CHFR-201ENST00000266880 CCDC196A0A1B0GTZ2 297 aa12.65□□□□□ -0.38
CHFR-201ENST00000266880 NLRP6P59044 892 aa12.65□□□□□ -0.38
CHFR-201ENST00000266880 CATIPQ7Z7H3 387 aa12.65□□□□□ -0.38
CHFR-201ENST00000266880 CAVIN2O95810 425 aa12.65□□□□□ -0.38
CHFR-201ENST00000266880 INF2Q27J81 1249 aa12.65□□□□□ -0.38
CHFR-201ENST00000266880 FYB2Q5VWT5 728 aa12.65□□□□□ -0.38
CHFR-201ENST00000266880 SYT10Q6XYQ8 523 aa12.65□□□□□ -0.38
CHFR-201ENST00000266880 TTC21AQ8NDW8 1320 aa12.65□□□□□ -0.38
CHFR-201ENST00000266880 TBCAO75347 108 aaKnown RBP12.65□□□□□ -0.38
CHFR-201ENST00000266880 STMN1P16949 149 aa12.65□□□□□ -0.38
CHFR-201ENST00000266880 SLMAPQ14BN4 828 aa12.65□□□□□ -0.38
CHFR-201ENST00000266880 CCDC62Q6P9F0 684 aa12.65□□□□□ -0.38
CHFR-201ENST00000266880 SCAPERQ9BY12 1400 aa12.65□□□□□ -0.38
CHFR-201ENST00000266880 METTL24Q5JXM2 366 aa12.65□□□□□ -0.39
CHFR-201ENST00000266880 MIER3Q7Z3K6 550 aa12.65□□□□□ -0.39
CHFR-201ENST00000266880 ABCF2Q9UG63 623 aa12.65□□□□□ -0.39
CHFR-201ENST00000266880 ZNF530Q6P9A1 599 aaPredicted RBP12.64□□□□□ -0.39
CHFR-201ENST00000266880 SPAG5Q96R06 1193 aa12.64□□□□□ -0.39
CHFR-201ENST00000266880 SPG7Q9UQ90 795 aa12.64□□□□□ -0.39
CHFR-201ENST00000266880 NDUFAB1O14561 156 aa12.64□□□□□ -0.39
CHFR-201ENST00000266880 VAV2P52735 878 aa12.64□□□□□ -0.39
CHFR-201ENST00000266880 CABP4P57796 275 aa12.64□□□□□ -0.39
CHFR-201ENST00000266880 DNAJC25Q9H1X3 360 aa12.64□□□□□ -0.39
CHFR-201ENST00000266880 MKNK2Q9HBH9 465 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms