RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 FAM76AQ8TAV0 307 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 MAPKBP1O60336 1514 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 A6NNZ2 444 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 TUBB8Q3ZCM7 444 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 ZNF287Q9HBT7 754 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 KIAA0586Q9BVV6 1533 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 HNRNPH2P55795 449 aaKnown RBP6.51□□□□□ -1.37
VCAN-201ENST00000265077 FKBP4Q02790 459 aaKnown RBP eCLIP6.51□□□□□ -1.37
VCAN-201ENST00000265077 SMC1AQ14683 1233 aaKnown RBP6.51□□□□□ -1.37
VCAN-201ENST00000265077 EXOC6BQ9Y2D4 811 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 RAPGEF6Q8TEU7 1601 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 TAOK3Q9H2K8 898 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 AKAP2Q9Y2D5 859 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 GCC2Q8IWJ2 1684 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 SNAPC4Q5SXM2 1469 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 CETN2P41208 172 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 IKQ13123 557 aaPredicted RBP6.51□□□□□ -1.37
VCAN-201ENST00000265077 EVI5LQ96CN4 794 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 CABS1Q96KC9 395 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 SPG7Q9UQ90 795 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 FSIP1Q8NA03 581 aa6.51□□□□□ -1.37
VCAN-201ENST00000265077 TRIM6Q9C030 488 aaPredicted RBP6.51□□□□□ -1.37
VCAN-201ENST00000265077 URB1O60287 2271 aaKnown RBP6.51□□□□□ -1.37
VCAN-201ENST00000265077 GUCY2CP25092 1073 aa6.5□□□□□ -1.37
VCAN-201ENST00000265077 SLC24A3Q9HC58 644 aa6.5□□□□□ -1.37
VCAN-201ENST00000265077 MRFAP1Q9Y605 127 aa6.5□□□□□ -1.37
VCAN-201ENST00000265077 BTBD11A6QL63 1104 aa6.5□□□□□ -1.37
VCAN-201ENST00000265077 CCDC92Q53HC0 331 aaPredicted RBP6.5□□□□□ -1.37
VCAN-201ENST00000265077 TSG101Q99816 390 aa6.5□□□□□ -1.37
VCAN-201ENST00000265077 SEC63Q9UGP8 760 aaKnown RBP6.5□□□□□ -1.37
VCAN-201ENST00000265077 CEP85LQ5SZL2 805 aa6.5□□□□□ -1.37
VCAN-201ENST00000265077 TRIM27P14373 513 aa6.5□□□□□ -1.37
VCAN-201ENST00000265077 IFFO1Q0D2I5 559 aa6.5□□□□□ -1.37
VCAN-201ENST00000265077 ARMCX6Q7L4S7 300 aa6.5□□□□□ -1.37
VCAN-201ENST00000265077 ZHX3Q9H4I2 956 aa6.5□□□□□ -1.37
VCAN-201ENST00000265077 NBPF9Q3BBW0 867 aa6.5□□□□□ -1.37
VCAN-201ENST00000265077 OSCARQ8IYS5 282 aa6.5□□□□□ -1.37
VCAN-201ENST00000265077 NUP88Q99567 741 aaPredicted RBP6.5□□□□□ -1.37
VCAN-201ENST00000265077 DDX41Q9UJV9 622 aaKnown RBP6.5□□□□□ -1.37
VCAN-201ENST00000265077 C17orf53Q8N3J3 647 aaPredicted RBP6.5□□□□□ -1.37
VCAN-201ENST00000265077 DDX27Q96GQ7 796 aaKnown RBP6.5□□□□□ -1.37
VCAN-201ENST00000265077 PEG3Q9GZU2 1588 aa6.5□□□□□ -1.37
VCAN-201ENST00000265077 A0A087WUV0 522 aaPredicted RBP6.5□□□□□ -1.37
VCAN-201ENST00000265077 ZFYP08048 801 aaPredicted RBP6.5□□□□□ -1.37
VCAN-201ENST00000265077 TTC22Q5TAA0 569 aa6.5□□□□□ -1.37
VCAN-201ENST00000265077 AIDAQ96BJ3 306 aa6.5□□□□□ -1.37
VCAN-201ENST00000265077 LUC7L3O95232 432 aaKnown RBP6.5□□□□□ -1.37
VCAN-201ENST00000265077 CAPN7Q9Y6W3 813 aa6.5□□□□□ -1.37
VCAN-201ENST00000265077 NUP160Q12769 1436 aa6.5□□□□□ -1.37
VCAN-201ENST00000265077 MAP4K4O95819 1239 aaPredicted RBP6.5□□□□□ -1.37
VCAN-201ENST00000265077 TAF7Q15545 349 aaPredicted RBP6.5□□□□□ -1.37
VCAN-201ENST00000265077 FAM200AQ8TCP9 573 aa6.5□□□□□ -1.37
VCAN-201ENST00000265077 PRPF40BQ6NWY9 871 aaKnown RBP6.49□□□□□ -1.37
VCAN-201ENST00000265077 SIL1Q9H173 461 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 IL1RAPL2Q9NP60 686 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 OPA1O60313 960 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 CCDC186Q7Z3E2 898 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 TMC6Q7Z403 805 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 MYH6P13533 1939 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 GOLGA8BA8MQT2 603 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 CNNM3Q8NE01 707 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 DNAI1Q9UI46 699 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 ARHGEF12Q9NZN5 1544 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 ZBTB17Q13105 803 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 JPH2Q9BR39 696 aaPredicted RBP6.49□□□□□ -1.37
VCAN-201ENST00000265077 CEP104O60308 925 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 CTAGE1Q96RT6 745 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 ELP1O95163 1332 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 LIG3P49916 1009 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 ATRIPQ8WXE1 791 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 PTGS1P23219 599 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 GNG11P61952 73 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 SNCBQ16143 134 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 AFAP1Q8N556 730 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 SEPT11Q9NVA2 429 aaKnown RBP6.49□□□□□ -1.37
VCAN-201ENST00000265077 ATP2C2O75185 946 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 C20orf194Q5TEA3 1177 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 LARP1Q6PKG0 1096 aaKnown RBP6.49□□□□□ -1.37
VCAN-201ENST00000265077 CACNA2D4Q7Z3S7 1137 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 ARMC2Q8NEN0 867 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 DDX12PQ92771 950 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 HMGB1P1B2RPK0 211 aaPredicted RBP6.49□□□□□ -1.37
VCAN-201ENST00000265077 NUCB1Q02818 461 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 TMEM132AQ24JP5 1023 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 ARHGEF11O15085 1522 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 KLHL10Q6JEL2 608 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 ARHGAP45Q92619 1136 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 ABCC5O15440 1437 aa6.49□□□□□ -1.37
VCAN-201ENST00000265077 PCK1P35558 622 aa6.48□□□□□ -1.37
VCAN-201ENST00000265077 DAAM2Q86T65 1068 aa6.48□□□□□ -1.37
VCAN-201ENST00000265077 FEZ2Q9UHY8 353 aaPredicted RBP6.48□□□□□ -1.37
VCAN-201ENST00000265077 A0A087WZG4 1122 aa6.48□□□□□ -1.37
VCAN-201ENST00000265077 HMGB2P26583 209 aaKnown RBP6.48□□□□□ -1.37
VCAN-201ENST00000265077 PIK3R4Q99570 1358 aa6.48□□□□□ -1.37
VCAN-201ENST00000265077 TTC21BQ7Z4L5 1316 aa6.48□□□□□ -1.37
VCAN-201ENST00000265077 PFDN1O60925 122 aa6.48□□□□□ -1.37
VCAN-201ENST00000265077 TMEM266Q2M3C6 531 aa6.48□□□□□ -1.37
VCAN-201ENST00000265077 RNF41Q9H4P4 317 aaPredicted RBP6.48□□□□□ -1.37
VCAN-201ENST00000265077 RP1L1Q8IWN7 2480 aaPredicted RBP6.48□□□□□ -1.37
VCAN-201ENST00000265077 FRMD3A2A2Y4 597 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms