RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 CNPY2Q9Y2B0 182 aa19.44■□□□□ 0.7
PHRF1-201ENST00000264555 ARAP3Q8WWN8 1544 aa19.43■□□□□ 0.7
PHRF1-201ENST00000264555 NBPF6Q5VWK0 638 aa19.43■□□□□ 0.7
PHRF1-201ENST00000264555 Q6ZUG5 572 aa19.43■□□□□ 0.7
PHRF1-201ENST00000264555 ZNF444Q8N0Y2 327 aaPredicted RBP19.43■□□□□ 0.7
PHRF1-201ENST00000264555 NBPF4Q96M43 638 aa19.43■□□□□ 0.7
PHRF1-201ENST00000264555 METP08581 1390 aa19.43■□□□□ 0.7
PHRF1-201ENST00000264555 MICU3Q86XE3 530 aa19.43■□□□□ 0.7
PHRF1-201ENST00000264555 AK7Q96M32 723 aa19.43■□□□□ 0.7
PHRF1-201ENST00000264555 SEC63Q9UGP8 760 aaKnown RBP19.43■□□□□ 0.7
PHRF1-201ENST00000264555 SFPQP23246 707 aaKnown RBP eCLIP19.43■□□□□ 0.74e-6■■■□□ 17.7
PHRF1-201ENST00000264555 KLF18A0A0U1RQI7 1052 aa19.43■□□□□ 0.7
PHRF1-201ENST00000264555 STX1AQ16623 288 aa19.43■□□□□ 0.7
PHRF1-201ENST00000264555 ZGPATQ8N5A5 531 aaKnown RBP19.42■□□□□ 0.7
PHRF1-201ENST00000264555 METTL22Q9BUU2 404 aaPredicted RBP19.42■□□□□ 0.7
PHRF1-201ENST00000264555 CLIP2Q9UDT6 1046 aa19.42■□□□□ 0.7
PHRF1-201ENST00000264555 XRCC6P12956 609 aaKnown RBP eCLIP19.42■□□□□ 0.7
PHRF1-201ENST00000264555 RPGRQ92834 1020 aaKnown RBP19.42■□□□□ 0.7
PHRF1-201ENST00000264555 ADCY5O95622 1261 aa19.41■□□□□ 0.7
PHRF1-201ENST00000264555 SLF2Q8IX21 1173 aa19.41■□□□□ 0.7
PHRF1-201ENST00000264555 CNNM3Q8NE01 707 aa19.41■□□□□ 0.7
PHRF1-201ENST00000264555 LRRC2Q9BYS8 371 aa19.41■□□□□ 0.7
PHRF1-201ENST00000264555 RNF113AO15541 343 aaKnown RBP19.41■□□□□ 0.7
PHRF1-201ENST00000264555 RUFY3Q7L099 469 aa19.41■□□□□ 0.7
PHRF1-201ENST00000264555 KIF2AO00139 706 aaPredicted RBP19.41■□□□□ 0.7
PHRF1-201ENST00000264555 PLBD2Q8NHP8 589 aa19.41■□□□□ 0.7
PHRF1-201ENST00000264555 ATP6V1AP38606 617 aa19.41■□□□□ 0.7
PHRF1-201ENST00000264555 ZNF165P49910 485 aa19.41■□□□□ 0.7
PHRF1-201ENST00000264555 EIF4A1P60842 406 aaKnown RBP19.41■□□□□ 0.7
PHRF1-201ENST00000264555 PNMA6EA0A0J9YXQ4 647 aa19.4■□□□□ 0.7
PHRF1-201ENST00000264555 KRT23Q9C075 422 aa19.4■□□□□ 0.7
PHRF1-201ENST00000264555 SLC52A2Q9HAB3 445 aa19.4■□□□□ 0.7
PHRF1-201ENST00000264555 LUC7LQ9NQ29 371 aaKnown RBP19.4■□□□□ 0.7
PHRF1-201ENST00000264555 ERCC6L2Q5T890 1561 aa19.4■□□□□ 0.7
PHRF1-201ENST00000264555 SLC9C2Q5TAH2 1124 aa19.4■□□□□ 0.7
PHRF1-201ENST00000264555 ZHX3Q9H4I2 956 aa19.4■□□□□ 0.7
PHRF1-201ENST00000264555 LDHCP07864 332 aa19.4■□□□□ 0.7
PHRF1-201ENST00000264555 SPTY2D1Q68D10 685 aaPredicted RBP19.4■□□□□ 0.7
PHRF1-201ENST00000264555 CCDC144CPQ8IYA2 1237 aa19.4■□□□□ 0.7
PHRF1-201ENST00000264555 SMARCC1Q92922 1105 aaPredicted RBP19.4■□□□□ 0.7
PHRF1-201ENST00000264555 CNNM2Q9H8M5 875 aa19.4■□□□□ 0.7
PHRF1-201ENST00000264555 PLEKHG1Q9ULL1 1385 aa19.4■□□□□ 0.7
PHRF1-201ENST00000264555 CCDC171Q6TFL3 1326 aa19.39■□□□□ 0.7
PHRF1-201ENST00000264555 CT47A1Q5JQC4 288 aaPredicted RBP19.39■□□□□ 0.69
PHRF1-201ENST00000264555 TXLNBQ8N3L3 684 aa19.39■□□□□ 0.69
PHRF1-201ENST00000264555 UNC13BO14795 1591 aa19.39■□□□□ 0.69
PHRF1-201ENST00000264555 GIMAP6Q6P9H5 292 aa19.39■□□□□ 0.69
PHRF1-201ENST00000264555 NLRP5P59047 1200 aa19.39■□□□□ 0.69
PHRF1-201ENST00000264555 PDE4BQ07343 736 aa19.39■□□□□ 0.69
PHRF1-201ENST00000264555 TRPM1Q7Z4N2 1603 aa19.38■□□□□ 0.69
PHRF1-201ENST00000264555 NEMFO60524 1076 aa19.38■□□□□ 0.69
PHRF1-201ENST00000264555 ANKRD18AQ8IVF6 992 aa19.38■□□□□ 0.69
PHRF1-201ENST00000264555 TMTC2Q8N394 836 aa19.38■□□□□ 0.69
PHRF1-201ENST00000264555 TANGO6Q9C0B7 1094 aa19.38■□□□□ 0.69
PHRF1-201ENST00000264555 DEF6Q9H4E7 631 aa19.38■□□□□ 0.69
PHRF1-201ENST00000264555 HCLS1P14317 486 aaPredicted RBP19.38■□□□□ 0.69
PHRF1-201ENST00000264555 DZIP3Q86Y13 1208 aaKnown RBP19.38■□□□□ 0.69
PHRF1-201ENST00000264555 SLC26A6Q9BXS9 759 aa19.38■□□□□ 0.69
PHRF1-201ENST00000264555 KIF5BP33176 963 aa19.38■□□□□ 0.69
PHRF1-201ENST00000264555 DDB1Q16531 1140 aa19.38■□□□□ 0.69
PHRF1-201ENST00000264555 FAM177A1Q8N128 213 aaPredicted RBP19.38■□□□□ 0.69
PHRF1-201ENST00000264555 UTP14AQ9BVJ6 771 aaKnown RBP19.38■□□□□ 0.69
PHRF1-201ENST00000264555 ABCC3O15438 1527 aa19.38■□□□□ 0.69
PHRF1-201ENST00000264555 ZBTB43O43298 467 aa19.38■□□□□ 0.69
PHRF1-201ENST00000264555 SSBP05455 408 aaKnown RBP eCLIP19.38■□□□□ 0.69
PHRF1-201ENST00000264555 DNM1Q05193 864 aaKnown RBP19.38■□□□□ 0.69
PHRF1-201ENST00000264555 RAB11FIP4Q86YS3 637 aa19.38■□□□□ 0.69
PHRF1-201ENST00000264555 PPFIA3O75145 1194 aa19.38■□□□□ 0.69
PHRF1-201ENST00000264555 NBPF7P0C2Y1 421 aaPredicted RBP19.37■□□□□ 0.69
PHRF1-201ENST00000264555 BAG3O95817 575 aa19.37■□□□□ 0.69
PHRF1-201ENST00000264555 ANO8Q9HCE9 1232 aaPredicted RBP19.37■□□□□ 0.69
PHRF1-201ENST00000264555 PTPN14Q15678 1187 aa19.37■□□□□ 0.69
PHRF1-201ENST00000264555 WTAPQ15007 396 aa19.37■□□□□ 0.69
PHRF1-201ENST00000264555 CCDC194A0A1B0GVG4 234 aa19.36■□□□□ 0.69
PHRF1-201ENST00000264555 SF3B2Q13435 895 aaKnown RBP19.36■□□□□ 0.69
PHRF1-201ENST00000264555 NBPF5PQ86XG9 351 aaPredicted RBP19.36■□□□□ 0.69
PHRF1-201ENST00000264555 IL17REQ8NFR9 667 aa19.36■□□□□ 0.69
PHRF1-201ENST00000264555 MPHOSPH10O00566 681 aaKnown RBP19.36■□□□□ 0.69
PHRF1-201ENST00000264555 IRS4O14654 1257 aaPredicted RBP19.36■□□□□ 0.69
PHRF1-201ENST00000264555 KCNG4Q8TDN1 519 aa19.36■□□□□ 0.69
PHRF1-201ENST00000264555 EPB41L2O43491 1005 aaKnown RBP19.36■□□□□ 0.69
PHRF1-201ENST00000264555 DHX32Q7L7V1 743 aaKnown RBP19.36■□□□□ 0.69
PHRF1-201ENST00000264555 CRNKL1Q9BZJ0 848 aaKnown RBP19.36■□□□□ 0.69
PHRF1-201ENST00000264555 TMOD2Q9NZR1 351 aa19.36■□□□□ 0.69
PHRF1-201ENST00000264555 TOP1P11387 765 aaKnown RBP19.35■□□□□ 0.69
PHRF1-201ENST00000264555 NIP7Q9Y221 180 aaKnown RBP eCLIP19.35■□□□□ 0.69
PHRF1-201ENST00000264555 CYP7A1P22680 504 aa19.35■□□□□ 0.69
PHRF1-201ENST00000264555 HELLSQ9NRZ9 838 aa19.35■□□□□ 0.69
PHRF1-201ENST00000264555 SLC4A4Q9Y6R1 1079 aa19.35■□□□□ 0.69
PHRF1-201ENST00000264555 RTL1A6NKG5 1358 aa19.35■□□□□ 0.69
PHRF1-201ENST00000264555 TSPY2A6NKD2 308 aa19.35■□□□□ 0.69
PHRF1-201ENST00000264555 SGSM2O43147 1006 aa19.35■□□□□ 0.69
PHRF1-201ENST00000264555 ZSCAN12O43309 604 aa19.35■□□□□ 0.69
PHRF1-201ENST00000264555 HSPA2P54652 639 aa19.35■□□□□ 0.69
PHRF1-201ENST00000264555 ACSBG1Q96GR2 724 aa19.35■□□□□ 0.69
PHRF1-201ENST00000264555 PRC1O43663 620 aa19.35■□□□□ 0.69
PHRF1-201ENST00000264555 GSDMDP57764 484 aa19.35■□□□□ 0.69
PHRF1-201ENST00000264555 TNNI3KQ59H18 835 aa19.35■□□□□ 0.69
PHRF1-201ENST00000264555 CRACR2BQ8N4Y2 399 aaPredicted RBP19.35■□□□□ 0.69
PHRF1-201ENST00000264555 FPGT-TNNI3KV9GXZ4 949 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms