RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 PES1O00541 588 aaKnown RBP19.02■□□□□ 0.64
PDZRN3-201ENST00000263666 ARHGEF40Q8TER5 1519 aa19.02■□□□□ 0.64
PDZRN3-201ENST00000263666 IFIT1P09914 478 aaKnown RBP19.02■□□□□ 0.64
PDZRN3-201ENST00000263666 HS1BP3Q53T59 392 aa19.02■□□□□ 0.64
PDZRN3-201ENST00000263666 TTC39AQ5SRH9 613 aa19.02■□□□□ 0.64
PDZRN3-201ENST00000263666 CCAR1Q8IX12 1150 aaKnown RBP19.02■□□□□ 0.64
PDZRN3-201ENST00000263666 LINS1Q8NG48 757 aa19.02■□□□□ 0.64
PDZRN3-201ENST00000263666 FAM200AQ8TCP9 573 aa19.02■□□□□ 0.64
PDZRN3-201ENST00000263666 CHGBP05060 677 aa19.01■□□□□ 0.63
PDZRN3-201ENST00000263666 VPS53Q5VIR6 699 aa19.01■□□□□ 0.63
PDZRN3-201ENST00000263666 SHPRHQ149N8 1683 aa19.01■□□□□ 0.63
PDZRN3-201ENST00000263666 TTLL5Q6EMB2 1281 aa19.01■□□□□ 0.63
PDZRN3-201ENST00000263666 RNMTO43148 476 aaKnown RBP19.01■□□□□ 0.63
PDZRN3-201ENST00000263666 CDK11BP21127 795 aaKnown RBP19.01■□□□□ 0.63
PDZRN3-201ENST00000263666 AKAP4Q5JQC9 854 aa19.01■□□□□ 0.63
PDZRN3-201ENST00000263666 CFAP45Q9UL16 551 aa19.01■□□□□ 0.63
PDZRN3-201ENST00000263666 KIF24Q5T7B8 1368 aa19.01■□□□□ 0.63
PDZRN3-201ENST00000263666 CD163L1Q9NR16 1453 aa19.01■□□□□ 0.63
PDZRN3-201ENST00000263666 IDH1O75874 414 aaKnown RBP19.01■□□□□ 0.63
PDZRN3-201ENST00000263666 PI4K2BQ8TCG2 481 aa19.01■□□□□ 0.63
PDZRN3-201ENST00000263666 MTMR7Q9Y216 660 aa19.01■□□□□ 0.63
PDZRN3-201ENST00000263666 GPTP24298 496 aa19■□□□□ 0.63
PDZRN3-201ENST00000263666 PYCARDQ9ULZ3 195 aa19■□□□□ 0.63
PDZRN3-201ENST00000263666 MYO3AQ8NEV4 1616 aa19■□□□□ 0.63
PDZRN3-201ENST00000263666 COL3A1P02461 1466 aaPredicted RBP19■□□□□ 0.63
PDZRN3-201ENST00000263666 CEP126Q9P2H0 1117 aa19■□□□□ 0.63
PDZRN3-201ENST00000263666 UBAP1LF5GYI3 381 aa18.99■□□□□ 0.63
PDZRN3-201ENST00000263666 RXRAP19793 462 aa18.99■□□□□ 0.63
PDZRN3-201ENST00000263666 UVSSAQ2YD98 709 aa18.99■□□□□ 0.63
PDZRN3-201ENST00000263666 ZNF594Q96JF6 807 aaPredicted RBP18.99■□□□□ 0.63
PDZRN3-201ENST00000263666 STAP2Q9UGK3 403 aa18.99■□□□□ 0.63
PDZRN3-201ENST00000263666 FTOQ9C0B1 505 aaKnown RBP eCLIP18.99■□□□□ 0.63
PDZRN3-201ENST00000263666 NCOA3Q9Y6Q9 1424 aa18.99■□□□□ 0.63
PDZRN3-201ENST00000263666 MTERF4Q7Z6M4 381 aaKnown RBP18.99■□□□□ 0.63
PDZRN3-201ENST00000263666 IP6K1Q92551 441 aa18.99■□□□□ 0.63
PDZRN3-201ENST00000263666 NRBP1Q9UHY1 535 aa18.99■□□□□ 0.63
PDZRN3-201ENST00000263666 TTC41PQ6P2S7 1318 aa18.99■□□□□ 0.63
PDZRN3-201ENST00000263666 IGSF1Q8N6C5 1336 aa18.99■□□□□ 0.63
PDZRN3-201ENST00000263666 KRT32Q14532 448 aa18.98■□□□□ 0.63
PDZRN3-201ENST00000263666 ZNF589Q86UQ0 364 aaPredicted RBP18.98■□□□□ 0.63
PDZRN3-201ENST00000263666 USP6P35125 1406 aa18.98■□□□□ 0.63
PDZRN3-201ENST00000263666 TRIM29Q14134 588 aa18.98■□□□□ 0.63
PDZRN3-201ENST00000263666 CCDC57Q2TAC2 916 aa18.98■□□□□ 0.63
PDZRN3-201ENST00000263666 NGLY1Q96IV0 654 aa18.98■□□□□ 0.63
PDZRN3-201ENST00000263666 ZNF396Q96N95 335 aaPredicted RBP18.98■□□□□ 0.63
PDZRN3-201ENST00000263666 KIAA1210Q9ULL0 1709 aa18.98■□□□□ 0.63
PDZRN3-201ENST00000263666 ZC3H13Q5T200 1668 aaKnown RBP18.98■□□□□ 0.63
PDZRN3-201ENST00000263666 ZNF500O60304 480 aaPredicted RBP18.98■□□□□ 0.63
PDZRN3-201ENST00000263666 RGS12O14924 1447 aa18.97■□□□□ 0.63
PDZRN3-201ENST00000263666 RIOK3O14730 519 aaKnown RBP18.97■□□□□ 0.63
PDZRN3-201ENST00000263666 TPM3P06753 285 aa18.97■□□□□ 0.63
PDZRN3-201ENST00000263666 PIBF1Q8WXW3 757 aa18.97■□□□□ 0.63
PDZRN3-201ENST00000263666 MROH1Q8NDA8 1641 aa18.97■□□□□ 0.63
PDZRN3-201ENST00000263666 ARHGEF10O15013 1369 aa18.97■□□□□ 0.63
PDZRN3-201ENST00000263666 CPLX2Q6PUV4 134 aaKnown RBP18.97■□□□□ 0.63
PDZRN3-201ENST00000263666 CEP57L1Q8IYX8 460 aa18.97■□□□□ 0.63
PDZRN3-201ENST00000263666 CNNM1Q9NRU3 951 aa18.97■□□□□ 0.63
PDZRN3-201ENST00000263666 CBX8Q9HC52 389 aa18.96■□□□□ 0.63
PDZRN3-201ENST00000263666 DDX19AQ9NUU7 478 aaKnown RBP18.96■□□□□ 0.63
PDZRN3-201ENST00000263666 ALDH1L1O75891 902 aa18.96■□□□□ 0.63
PDZRN3-201ENST00000263666 SERPINC1P01008 464 aa18.96■□□□□ 0.63
PDZRN3-201ENST00000263666 CCDC158Q5M9N0 1113 aa18.96■□□□□ 0.63
PDZRN3-201ENST00000263666 USP16Q9Y5T5 823 aa18.96■□□□□ 0.63
PDZRN3-201ENST00000263666 NR1I2O75469 434 aa18.96■□□□□ 0.63
PDZRN3-201ENST00000263666 DIP2BQ9P265 1576 aa18.96■□□□□ 0.63
PDZRN3-201ENST00000263666 MARCKSP29966 332 aaPredicted RBP18.95■□□□□ 0.62
PDZRN3-201ENST00000263666 RASSF8Q8NHQ8 419 aa18.95■□□□□ 0.62
PDZRN3-201ENST00000263666 GOLGA8BA8MQT2 603 aa18.95■□□□□ 0.62
PDZRN3-201ENST00000263666 AOPEPQ8N6M6 819 aa18.95■□□□□ 0.62
PDZRN3-201ENST00000263666 NAT10Q9H0A0 1025 aaKnown RBP18.95■□□□□ 0.62
PDZRN3-201ENST00000263666 A0A0U1RQG5 324 aaPredicted RBP18.95■□□□□ 0.62
PDZRN3-201ENST00000263666 GIGYF1O75420 1035 aaPredicted RBP18.95■□□□□ 0.62
PDZRN3-201ENST00000263666 ZNF496Q96IT1 587 aaPredicted RBP18.95■□□□□ 0.62
PDZRN3-201ENST00000263666 A0A1B0GVL5 298 aa18.95■□□□□ 0.62
PDZRN3-201ENST00000263666 RPS6KB1P23443 525 aa18.95■□□□□ 0.62
PDZRN3-201ENST00000263666 MAPK8IP2Q13387 824 aaPredicted RBP18.95■□□□□ 0.62
PDZRN3-201ENST00000263666 IFNL2Q8IZJ0 200 aa18.95■□□□□ 0.62
PDZRN3-201ENST00000263666 LEO1Q8WVC0 666 aaPredicted RBP18.95■□□□□ 0.62
PDZRN3-201ENST00000263666 C8orf76Q96K31 380 aa18.95■□□□□ 0.62
PDZRN3-201ENST00000263666 SLAIN2Q9P270 581 aa18.95■□□□□ 0.62
PDZRN3-201ENST00000263666 TAF6LQ9Y6J9 622 aa18.95■□□□□ 0.62
PDZRN3-201ENST00000263666 PTPN14Q15678 1187 aa18.94■□□□□ 0.62
PDZRN3-201ENST00000263666 MAP2P11137 1827 aaKnown RBP18.94■□□□□ 0.62
PDZRN3-201ENST00000263666 ERICH4A6NGS2 130 aa18.94■□□□□ 0.62
PDZRN3-201ENST00000263666 U2AF2P26368 475 aaKnown RBP eCLIP18.94■□□□□ 0.62
PDZRN3-201ENST00000263666 U3KPZ7 1027 aaPredicted RBP18.94■□□□□ 0.62
PDZRN3-201ENST00000263666 TMEM94Q12767 1356 aa18.94■□□□□ 0.62
PDZRN3-201ENST00000263666 VWDEQ8N2E2 1590 aa18.94■□□□□ 0.62
PDZRN3-201ENST00000263666 PIK3C2BO00750 1634 aa18.94■□□□□ 0.62
PDZRN3-201ENST00000263666 PTPDC1A2A3K4 754 aa18.93■□□□□ 0.62
PDZRN3-201ENST00000263666 TOM1O60784 492 aa18.93■□□□□ 0.62
PDZRN3-201ENST00000263666 LMTK2Q8IWU2 1503 aa18.93■□□□□ 0.62
PDZRN3-201ENST00000263666 DDX21Q9NR30 783 aaKnown RBP eCLIP18.93■□□□□ 0.62
PDZRN3-201ENST00000263666 NPHP4O75161 1426 aaPredicted RBP18.93■□□□□ 0.62
PDZRN3-201ENST00000263666 TMC6Q7Z403 805 aa18.93■□□□□ 0.62
PDZRN3-201ENST00000263666 NUP133Q8WUM0 1156 aa18.93■□□□□ 0.62
PDZRN3-201ENST00000263666 MICU3Q86XE3 530 aa18.92■□□□□ 0.62
PDZRN3-201ENST00000263666 MNS1Q8NEH6 495 aa18.92■□□□□ 0.62
PDZRN3-201ENST00000263666 MCMDC2Q4G0Z9 681 aa18.92■□□□□ 0.62
PDZRN3-201ENST00000263666 TMOD3Q9NYL9 352 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms