RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 C21orf2O43822 256 aa23.63■■□□□ 1.37
CYSTM1-201ENST00000261811 BBOX1O75936 387 aa23.63■■□□□ 1.37
CYSTM1-201ENST00000261811 MS4A1P11836 297 aa23.63■■□□□ 1.37
CYSTM1-201ENST00000261811 GRIPAP1Q4V328 841 aa23.63■■□□□ 1.37
CYSTM1-201ENST00000261811 C3orf67Q6ZVT6 689 aa23.63■■□□□ 1.37
CYSTM1-201ENST00000261811 TMC4Q7Z404 712 aa23.63■■□□□ 1.37
CYSTM1-201ENST00000261811 PLA2G12BQ9BX93 195 aa23.63■■□□□ 1.37
CYSTM1-201ENST00000261811 SBF1O95248 1867 aa23.63■■□□□ 1.37
CYSTM1-201ENST00000261811 CTSWP56202 376 aa23.62■■□□□ 1.37
CYSTM1-201ENST00000261811 CC2D2BQ6DHV5 1058 aa23.62■■□□□ 1.37
CYSTM1-201ENST00000261811 ZNF219Q9P2Y4 722 aaPredicted RBP23.62■■□□□ 1.37
CYSTM1-201ENST00000261811 PPEF1O14829 653 aaPredicted RBP23.61■■□□□ 1.37
CYSTM1-201ENST00000261811 GRAPQ13588 217 aa23.61■■□□□ 1.37
CYSTM1-201ENST00000261811 FTSJ3Q8IY81 847 aaKnown RBP23.61■■□□□ 1.37
CYSTM1-201ENST00000261811 GRAPLQ8TC17 118 aaPredicted RBP23.61■■□□□ 1.37
CYSTM1-201ENST00000261811 ABCC4O15439 1325 aa23.61■■□□□ 1.37
CYSTM1-201ENST00000261811 TRIM27P14373 513 aa23.6■■□□□ 1.37
CYSTM1-201ENST00000261811 CCDC93Q567U6 631 aa23.6■■□□□ 1.37
CYSTM1-201ENST00000261811 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.6■■□□□ 1.37
CYSTM1-201ENST00000261811 SPEF2Q9C093 1822 aa23.6■■□□□ 1.37
CYSTM1-201ENST00000261811 CASP7P55210 303 aa23.59■■□□□ 1.37
CYSTM1-201ENST00000261811 INTS3Q68E01 1043 aaKnown RBP23.59■■□□□ 1.37
CYSTM1-201ENST00000261811 RTKN2Q8IZC4 609 aa23.59■■□□□ 1.37
CYSTM1-201ENST00000261811 CDC5LQ99459 802 aaKnown RBP23.59■■□□□ 1.37
CYSTM1-201ENST00000261811 GOLGB1Q14789 3259 aaKnown RBP23.59■■□□□ 1.37
CYSTM1-201ENST00000261811 TTLL11Q8NHH1 800 aa23.59■■□□□ 1.37
CYSTM1-201ENST00000261811 UTYO14607 1347 aa23.58■■□□□ 1.37
CYSTM1-201ENST00000261811 DICER1Q9UPY3 1922 aaKnown RBP23.58■■□□□ 1.37
CYSTM1-201ENST00000261811 RPS8P62241 208 aaKnown RBP23.57■■□□□ 1.36
CYSTM1-201ENST00000261811 DZIP1LQ8IYY4 767 aaKnown RBP23.57■■□□□ 1.36
CYSTM1-201ENST00000261811 CLUAP1Q96AJ1 413 aa23.57■■□□□ 1.36
CYSTM1-201ENST00000261811 CCDC85AQ96PX6 553 aaPredicted RBP23.57■■□□□ 1.36
CYSTM1-201ENST00000261811 ATP6V0A2Q9Y487 856 aa23.57■■□□□ 1.36
CYSTM1-201ENST00000261811 RTL9Q8NET4 1388 aa23.57■■□□□ 1.36
CYSTM1-201ENST00000261811 NBPF7P0C2Y1 421 aaPredicted RBP23.56■■□□□ 1.36
CYSTM1-201ENST00000261811 UBTFL1P0CB47 393 aaPredicted RBP23.56■■□□□ 1.36
CYSTM1-201ENST00000261811 ANKRD18AQ8IVF6 992 aa23.56■■□□□ 1.36
CYSTM1-201ENST00000261811 SP8Q8IXZ3 490 aa23.56■■□□□ 1.36
CYSTM1-201ENST00000261811 C7orf43Q8WVR3 580 aa23.56■■□□□ 1.36
CYSTM1-201ENST00000261811 USP44Q9H0E7 712 aa23.56■■□□□ 1.36
CYSTM1-201ENST00000261811 CHMP3Q9Y3E7 222 aa23.56■■□□□ 1.36
CYSTM1-201ENST00000261811 CSF1RP07333 972 aa23.55■■□□□ 1.36
CYSTM1-201ENST00000261811 GNAI3P08754 354 aa23.55■■□□□ 1.36
CYSTM1-201ENST00000261811 TAOK3Q9H2K8 898 aa23.55■■□□□ 1.36
CYSTM1-201ENST00000261811 LRRC37AA6NMS7 1700 aa23.54■■□□□ 1.36
CYSTM1-201ENST00000261811 ANKRD18BA2A2Z9 1011 aa23.54■■□□□ 1.36
CYSTM1-201ENST00000261811 GREM2Q9H772 168 aa23.54■■□□□ 1.36
CYSTM1-201ENST00000261811 LTBP3Q9NS15 1303 aa23.53■■□□□ 1.36
CYSTM1-201ENST00000261811 IGHMBP2P38935 993 aaKnown RBP23.53■■□□□ 1.36
CYSTM1-201ENST00000261811 FOXO4P98177 505 aa23.53■■□□□ 1.36
CYSTM1-201ENST00000261811 IFIT5Q13325 482 aaKnown RBP23.53■■□□□ 1.36
CYSTM1-201ENST00000261811 CCDC57Q2TAC2 916 aa23.53■■□□□ 1.36
CYSTM1-201ENST00000261811 CELF1Q92879 486 aaKnown RBP23.53■■□□□ 1.36
CYSTM1-201ENST00000261811 SEC31BQ9NQW1 1179 aa23.53■■□□□ 1.36
CYSTM1-201ENST00000261811 LMNB1P20700 586 aa23.52■■□□□ 1.36
CYSTM1-201ENST00000261811 ITGA6P23229 1130 aa23.52■■□□□ 1.36
CYSTM1-201ENST00000261811 LMBR1LQ6UX01 489 aa23.52■■□□□ 1.36
CYSTM1-201ENST00000261811 SUCLG2Q96I99 432 aa23.52■■□□□ 1.36
CYSTM1-201ENST00000261811 FKBP4Q02790 459 aaKnown RBP eCLIP23.51■■□□□ 1.35
CYSTM1-201ENST00000261811 TAF7LQ5H9L4 462 aa23.51■■□□□ 1.35
CYSTM1-201ENST00000261811 SUPT20HQ8NEM7 779 aa23.51■■□□□ 1.35
CYSTM1-201ENST00000261811 MPHOSPH8Q99549 860 aa23.51■■□□□ 1.35
CYSTM1-201ENST00000261811 FAM161AQ3B820 660 aa23.5■■□□□ 1.35
CYSTM1-201ENST00000261811 MPNDQ8N594 471 aa23.5■■□□□ 1.35
CYSTM1-201ENST00000261811 TMEM57Q8N5G2 664 aa23.5■■□□□ 1.35
CYSTM1-201ENST00000261811 PSMD1Q99460 953 aa23.5■■□□□ 1.35
CYSTM1-201ENST00000261811 RASSF7Q02833 373 aa23.49■■□□□ 1.35
CYSTM1-201ENST00000261811 DPP8Q6V1X1 898 aaPredicted RBP23.49■■□□□ 1.35
CYSTM1-201ENST00000261811 ITPRIPQ8IWB1 547 aa23.49■■□□□ 1.35
CYSTM1-201ENST00000261811 BICC1Q9H694 974 aaKnown RBP23.49■■□□□ 1.35
CYSTM1-201ENST00000261811 NFKBIEO00221 500 aa23.48■■□□□ 1.35
CYSTM1-201ENST00000261811 YY1P25490 414 aa23.48■■□□□ 1.35
CYSTM1-201ENST00000261811 CHMP4BQ9H444 224 aaKnown RBP23.48■■□□□ 1.35
CYSTM1-201ENST00000261811 BSDC1Q9NW68 430 aaPredicted RBP23.48■■□□□ 1.35
CYSTM1-201ENST00000261811 RNF181Q9P0P0 153 aa23.48■■□□□ 1.35
CYSTM1-201ENST00000261811 TIAM2Q8IVF5 1701 aa23.48■■□□□ 1.35
CYSTM1-201ENST00000261811 EPHA10Q5JZY3 1008 aa23.47■■□□□ 1.35
CYSTM1-201ENST00000261811 C9orf131Q5VYM1 1079 aa23.47■■□□□ 1.35
CYSTM1-201ENST00000261811 OLFM4Q6UX06 510 aa23.47■■□□□ 1.35
CYSTM1-201ENST00000261811 VPS33BQ9H267 617 aa23.47■■□□□ 1.35
CYSTM1-201ENST00000261811 TNNQ9UQP3 1299 aa23.47■■□□□ 1.35
CYSTM1-201ENST00000261811 RABL6Q3YEC7 729 aaPredicted RBP23.46■■□□□ 1.35
CYSTM1-201ENST00000261811 MEIS3Q99687 375 aa23.46■■□□□ 1.35
CYSTM1-201ENST00000261811 ANKIB1Q9P2G1 1089 aa23.46■■□□□ 1.35
CYSTM1-201ENST00000261811 NSFL1CQ9UNZ2 370 aaKnown RBP23.46■■□□□ 1.35
CYSTM1-201ENST00000261811 KAZALD1Q96I82 304 aa23.45■■□□□ 1.34
CYSTM1-201ENST00000261811 UTRNP46939 3433 aa23.45■■□□□ 1.34
CYSTM1-201ENST00000261811 ZC3H4Q9UPT8 1303 aaKnown RBP23.45■■□□□ 1.34
CYSTM1-201ENST00000261811 GNAI2P04899 355 aa23.44■■□□□ 1.34
CYSTM1-201ENST00000261811 PDE3AQ14432 1141 aa23.44■■□□□ 1.34
CYSTM1-201ENST00000261811 LRRFIP2Q9Y608 721 aaKnown RBP23.44■■□□□ 1.34
CYSTM1-201ENST00000261811 IARSP41252 1262 aaKnown RBP23.43■■□□□ 1.34
CYSTM1-201ENST00000261811 EYA3Q99504 573 aa23.43■■□□□ 1.34
CYSTM1-201ENST00000261811 ANKRD2Q9GZV1 360 aa23.43■■□□□ 1.34
CYSTM1-201ENST00000261811 COL4A1P02462 1669 aa23.42■■□□□ 1.34
CYSTM1-201ENST00000261811 PLIN1O60240 522 aa23.42■■□□□ 1.34
CYSTM1-201ENST00000261811 LDHAL6AQ6ZMR3 332 aa23.42■■□□□ 1.34
CYSTM1-201ENST00000261811 ANKRD44Q8N8A2 993 aa23.42■■□□□ 1.34
CYSTM1-201ENST00000261811 PANK1Q8TE04 598 aa23.42■■□□□ 1.34
CYSTM1-201ENST00000261811 JDP2Q8WYK2 163 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms