RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 CAVIN1Q6NZI2 390 aaKnown RBP16.23■□□□□ 0.19
CDH1-201ENST00000261769 ZNHIT6Q9NWK9 470 aaKnown RBP16.23■□□□□ 0.19
CDH1-201ENST00000261769 MCM5P33992 734 aa16.23■□□□□ 0.19
CDH1-201ENST00000261769 IARSP41252 1262 aaKnown RBP16.23■□□□□ 0.19
CDH1-201ENST00000261769 HELBQ8NG08 1087 aaPredicted RBP16.23■□□□□ 0.19
CDH1-201ENST00000261769 TRIM5Q9C035 493 aa16.23■□□□□ 0.19
CDH1-201ENST00000261769 RDXP35241 583 aaKnown RBP16.22■□□□□ 0.19
CDH1-201ENST00000261769 PDE6BP35913 854 aa16.22■□□□□ 0.19
CDH1-201ENST00000261769 ZNF496Q96IT1 587 aaPredicted RBP16.22■□□□□ 0.19
CDH1-201ENST00000261769 NEK1Q96PY6 1258 aa16.22■□□□□ 0.19
CDH1-201ENST00000261769 DENND2AQ9ULE3 1009 aa16.22■□□□□ 0.19
CDH1-201ENST00000261769 SMC2O95347 1197 aa16.22■□□□□ 0.19
CDH1-201ENST00000261769 CCDC192P0DO97 292 aa16.22■□□□□ 0.19
CDH1-201ENST00000261769 HAND2P61296 217 aa16.22■□□□□ 0.19
CDH1-201ENST00000261769 CCDC39Q9UFE4 941 aa16.22■□□□□ 0.19
CDH1-201ENST00000261769 CCDC173Q0VFZ6 552 aa16.22■□□□□ 0.19
CDH1-201ENST00000261769 RBM26Q5T8P6 1007 aaKnown RBP16.22■□□□□ 0.19
CDH1-201ENST00000261769 ERCC6L2Q5T890 1561 aa16.22■□□□□ 0.19
CDH1-201ENST00000261769 TTC41PQ6P2S7 1318 aa16.22■□□□□ 0.19
CDH1-201ENST00000261769 MAGEB6P1A0A0J9YX57 407 aa16.22■□□□□ 0.19
CDH1-201ENST00000261769 TRIM21P19474 475 aaKnown RBP16.22■□□□□ 0.19
CDH1-201ENST00000261769 DHX8Q14562 1220 aaKnown RBP16.22■□□□□ 0.19
CDH1-201ENST00000261769 LUC7LQ9NQ29 371 aaKnown RBP16.22■□□□□ 0.19
CDH1-201ENST00000261769 GGA1Q9UJY5 639 aa16.22■□□□□ 0.19
CDH1-201ENST00000261769 UFL1O94874 794 aa16.21■□□□□ 0.19
CDH1-201ENST00000261769 PHKG2P15735 406 aa16.21■□□□□ 0.19
CDH1-201ENST00000261769 MATR3P43243 847 aaKnown RBP eCLIP16.21■□□□□ 0.19
CDH1-201ENST00000261769 MCMDC2Q4G0Z9 681 aa16.21■□□□□ 0.19
CDH1-201ENST00000261769 KIAA0232Q92628 1395 aa16.21■□□□□ 0.19
CDH1-201ENST00000261769 TRAK2O60296 914 aa16.21■□□□□ 0.19
CDH1-201ENST00000261769 DNAI2Q9GZS0 605 aa16.21■□□□□ 0.19
CDH1-201ENST00000261769 USP16Q9Y5T5 823 aa16.21■□□□□ 0.19
CDH1-201ENST00000261769 ALDH1B1P30837 517 aa16.21■□□□□ 0.19
CDH1-201ENST00000261769 EIF6P56537 245 aaKnown RBP16.21■□□□□ 0.19
CDH1-201ENST00000261769 PICALMQ13492 652 aa16.21■□□□□ 0.19
CDH1-201ENST00000261769 PAG1Q9NWQ8 432 aa16.21■□□□□ 0.19
CDH1-201ENST00000261769 PDE1AP54750 535 aa16.2■□□□□ 0.18
CDH1-201ENST00000261769 PPP1R12BO60237 982 aaPredicted RBP16.2■□□□□ 0.18
CDH1-201ENST00000261769 WTAPQ15007 396 aa16.2■□□□□ 0.18
CDH1-201ENST00000261769 ARHGEF25Q86VW2 580 aa16.2■□□□□ 0.18
CDH1-201ENST00000261769 TANGO6Q9C0B7 1094 aa16.2■□□□□ 0.18
CDH1-201ENST00000261769 PA2G4Q9UQ80 394 aaKnown RBP16.2■□□□□ 0.18
CDH1-201ENST00000261769 HCLS1P14317 486 aaPredicted RBP16.2■□□□□ 0.18
CDH1-201ENST00000261769 BRPF1P55201 1214 aaPredicted RBP16.2■□□□□ 0.18
CDH1-201ENST00000261769 MAST3O60307 1309 aa16.2■□□□□ 0.18
CDH1-201ENST00000261769 EYA2O00167 538 aa16.2■□□□□ 0.18
CDH1-201ENST00000261769 CHMP4BP1P59074 171 aa16.2■□□□□ 0.18
CDH1-201ENST00000261769 PAF1Q8N7H5 531 aa16.2■□□□□ 0.18
CDH1-201ENST00000261769 VAT1LQ9HCJ6 419 aa16.2■□□□□ 0.18
CDH1-201ENST00000261769 ARHGAP31Q2M1Z3 1444 aa16.2■□□□□ 0.18
CDH1-201ENST00000261769 FAM135BQ49AJ0 1406 aa16.2■□□□□ 0.18
CDH1-201ENST00000261769 KDM5CP41229 1560 aa16.19■□□□□ 0.18
CDH1-201ENST00000261769 B4DLN1 442 aa16.19■□□□□ 0.18
CDH1-201ENST00000261769 MRPL12P52815 198 aaKnown RBP16.19■□□□□ 0.18
CDH1-201ENST00000261769 NUCB1Q02818 461 aa16.19■□□□□ 0.18
CDH1-201ENST00000261769 ZNF592Q92610 1267 aa16.19■□□□□ 0.18
CDH1-201ENST00000261769 TSPY26PQ9H489 355 aa16.19■□□□□ 0.18
CDH1-201ENST00000261769 DPP8Q6V1X1 898 aaPredicted RBP16.19■□□□□ 0.18
CDH1-201ENST00000261769 TTC6Q86TZ1 520 aa16.19■□□□□ 0.18
CDH1-201ENST00000261769 SCAND2PQ9GZW5 306 aaPredicted RBP16.19■□□□□ 0.18
CDH1-201ENST00000261769 ITGA6P23229 1130 aa16.19■□□□□ 0.18
CDH1-201ENST00000261769 ROBO2Q9HCK4 1378 aa16.19■□□□□ 0.18
CDH1-201ENST00000261769 METAP2P50579 478 aaKnown RBP eCLIP16.19■□□□□ 0.18
CDH1-201ENST00000261769 NFKBIBQ15653 356 aa16.19■□□□□ 0.18
CDH1-201ENST00000261769 LARGE2Q8N3Y3 721 aa16.19■□□□□ 0.18
CDH1-201ENST00000261769 HIBADHP31937 336 aaKnown RBP16.18■□□□□ 0.18
CDH1-201ENST00000261769 MICU3Q86XE3 530 aa16.18■□□□□ 0.18
CDH1-201ENST00000261769 ERBB4Q15303 1308 aa16.18■□□□□ 0.18
CDH1-201ENST00000261769 MYCNP04198 464 aaPredicted RBP16.18■□□□□ 0.18
CDH1-201ENST00000261769 BICC1Q9H694 974 aaKnown RBP16.18■□□□□ 0.18
CDH1-201ENST00000261769 GJA3Q9Y6H8 435 aa16.18■□□□□ 0.18
CDH1-201ENST00000261769 SERPINC1P01008 464 aa16.18■□□□□ 0.18
CDH1-201ENST00000261769 RNF214Q8ND24 703 aa16.18■□□□□ 0.18
CDH1-201ENST00000261769 MYOM2P54296 1465 aa16.18■□□□□ 0.18
CDH1-201ENST00000261769 KIF20AO95235 890 aa16.17■□□□□ 0.18
CDH1-201ENST00000261769 PUM3Q15397 648 aaKnown RBP16.17■□□□□ 0.18
CDH1-201ENST00000261769 NLGN1Q8N2Q7 840 aa16.17■□□□□ 0.18
CDH1-201ENST00000261769 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.17■□□□□ 0.18
CDH1-201ENST00000261769 FERMT3Q86UX7 667 aa16.17■□□□□ 0.18
CDH1-201ENST00000261769 CERS3Q8IU89 383 aa16.17■□□□□ 0.18
CDH1-201ENST00000261769 HOOK2Q96ED9 719 aa16.17■□□□□ 0.18
CDH1-201ENST00000261769 TSHZ3Q63HK5 1081 aa16.17■□□□□ 0.18
CDH1-201ENST00000261769 TBC1D9Q6ZT07 1266 aa16.17■□□□□ 0.18
CDH1-201ENST00000261769 TXLNBQ8N3L3 684 aa16.17■□□□□ 0.18
CDH1-201ENST00000261769 WDR17Q8IZU2 1322 aa16.17■□□□□ 0.18
CDH1-201ENST00000261769 TFCP2Q12800 502 aa16.17■□□□□ 0.18
CDH1-201ENST00000261769 GRM1Q13255 1194 aa16.17■□□□□ 0.18
CDH1-201ENST00000261769 IFIT1BQ5T764 474 aaKnown RBP16.17■□□□□ 0.18
CDH1-201ENST00000261769 MCM9Q9NXL9 1143 aa16.17■□□□□ 0.18
CDH1-201ENST00000261769 RNF113AO15541 343 aaKnown RBP16.16■□□□□ 0.18
CDH1-201ENST00000261769 EIF4A1P60842 406 aaKnown RBP16.16■□□□□ 0.18
CDH1-201ENST00000261769 GPS2Q13227 327 aa16.16■□□□□ 0.18
CDH1-201ENST00000261769 SLC4A8Q2Y0W8 1093 aa16.16■□□□□ 0.18
CDH1-201ENST00000261769 CEP85Q6P2H3 762 aa16.16■□□□□ 0.18
CDH1-201ENST00000261769 KRT27Q7Z3Y8 459 aa16.16■□□□□ 0.18
CDH1-201ENST00000261769 NBPF7P0C2Y1 421 aaPredicted RBP16.16■□□□□ 0.18
CDH1-201ENST00000261769 CCT2P78371 535 aaKnown RBP16.16■□□□□ 0.18
CDH1-201ENST00000261769 ORC3Q9UBD5 711 aaPredicted RBP16.16■□□□□ 0.18
CDH1-201ENST00000261769 PPFIBP1Q86W92 1011 aa16.16■□□□□ 0.18
CDH1-201ENST00000261769 DCTPP1Q9H773 170 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms