RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 GPR25O00155 361 aa7.72□□□□□ -1.17
CCDC54-201ENST00000261058 MAP3K6O95382 1288 aa7.72□□□□□ -1.17
CCDC54-201ENST00000261058 HOXD8P13378 290 aaPredicted RBP7.72□□□□□ -1.17
CCDC54-201ENST00000261058 ZNF438Q7Z4V0 828 aa7.72□□□□□ -1.17
CCDC54-201ENST00000261058 GPR161Q8N6U8 529 aaKnown RBP7.72□□□□□ -1.17
CCDC54-201ENST00000261058 SNX29Q8TEQ0 813 aa7.72□□□□□ -1.17
CCDC54-201ENST00000261058 KRTAP4-6Q9BYQ5 205 aa7.72□□□□□ -1.17
CCDC54-201ENST00000261058 DNAJC25Q9H1X3 360 aa7.72□□□□□ -1.17
CCDC54-201ENST00000261058 CHRDQ9H2X0 955 aa7.72□□□□□ -1.17
CCDC54-201ENST00000261058 ZFATQ9P243 1243 aa7.72□□□□□ -1.17
CCDC54-201ENST00000261058 ZNF16P17020 682 aaPredicted RBP7.71□□□□□ -1.17
CCDC54-201ENST00000261058 CTBSQ01459 385 aa7.71□□□□□ -1.17
CCDC54-201ENST00000261058 ORC1Q13415 861 aa7.71□□□□□ -1.17
CCDC54-201ENST00000261058 LCE2CQ5TA81 110 aa7.71□□□□□ -1.17
CCDC54-201ENST00000261058 TTC16Q8NEE8 873 aa7.71□□□□□ -1.17
CCDC54-201ENST00000261058 BCL2L13Q9BXK5 485 aa7.71□□□□□ -1.17
CCDC54-201ENST00000261058 ABI2Q9NYB9 513 aaPredicted RBP7.71□□□□□ -1.17
CCDC54-201ENST00000261058 FAM181BA6NEQ2 426 aa7.7□□□□□ -1.18
CCDC54-201ENST00000261058 C2CD2LO14523 706 aa7.7□□□□□ -1.18
CCDC54-201ENST00000261058 EIF1AYO14602 144 aaKnown RBP7.7□□□□□ -1.18
CCDC54-201ENST00000261058 SASH3O75995 380 aa7.7□□□□□ -1.18
CCDC54-201ENST00000261058 TARSP26639 723 aaKnown RBP7.7□□□□□ -1.18
CCDC54-201ENST00000261058 VEGFBP49765 207 aa7.7□□□□□ -1.18
CCDC54-201ENST00000261058 EAPPQ56P03 285 aaPredicted RBP7.7□□□□□ -1.18
CCDC54-201ENST00000261058 CSRNP1Q96S65 589 aa7.7□□□□□ -1.18
CCDC54-201ENST00000261058 AVENQ9NQS1 362 aaPredicted RBP7.7□□□□□ -1.18
CCDC54-201ENST00000261058 FOXD3Q9UJU5 478 aaPredicted RBP7.7□□□□□ -1.18
CCDC54-201ENST00000261058 NEFLP07196 543 aa7.69□□□□□ -1.18
CCDC54-201ENST00000261058 SOX18P35713 384 aa7.69□□□□□ -1.18
CCDC54-201ENST00000261058 ZNF468Q5VIY5 522 aaPredicted RBP7.69□□□□□ -1.18
CCDC54-201ENST00000261058 OR13H1Q8NG92 308 aa7.69□□□□□ -1.18
CCDC54-201ENST00000261058 ZFYVE28Q9HCC9 887 aa7.69□□□□□ -1.18
CCDC54-201ENST00000261058 CNTN3Q9P232 1028 aa7.69□□□□□ -1.18
CCDC54-201ENST00000261058 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.69□□□□□ -1.18
CCDC54-201ENST00000261058 ERBB4Q15303 1308 aa7.69□□□□□ -1.18
CCDC54-201ENST00000261058 MMP20O60882 483 aa7.69□□□□□ -1.18
CCDC54-201ENST00000261058 TAGLNQ01995 201 aaKnown RBP7.69□□□□□ -1.18
CCDC54-201ENST00000261058 GIPC2Q8TF65 315 aa7.69□□□□□ -1.18
CCDC54-201ENST00000261058 IRF7Q92985 503 aa7.69□□□□□ -1.18
CCDC54-201ENST00000261058 MDFIQ99750 246 aa7.69□□□□□ -1.18
CCDC54-201ENST00000261058 PNMA6FA0A0J9YX94 578 aa7.68□□□□□ -1.18
CCDC54-201ENST00000261058 CPNE3O75131 537 aaKnown RBP7.68□□□□□ -1.18
CCDC54-201ENST00000261058 PRPF40AO75400 957 aaKnown RBP7.68□□□□□ -1.18
CCDC54-201ENST00000261058 NFKB1P19838 968 aa7.68□□□□□ -1.18
CCDC54-201ENST00000261058 MAPK8P45983 427 aa7.68□□□□□ -1.18
CCDC54-201ENST00000261058 C1orf127Q8N9H9 656 aa7.68□□□□□ -1.18
CCDC54-201ENST00000261058 FBF1Q8TES7 1133 aa7.68□□□□□ -1.18
CCDC54-201ENST00000261058 MBIPQ9NS73 344 aa7.68□□□□□ -1.18
CCDC54-201ENST00000261058 TLR7Q9NYK1 1049 aaKnown RBP7.68□□□□□ -1.18
CCDC54-201ENST00000261058 PHACTR2O75167 634 aa7.67□□□□□ -1.18
CCDC54-201ENST00000261058 SIN3BO75182 1162 aa7.67□□□□□ -1.18
CCDC54-201ENST00000261058 RARAP10276 462 aa7.67□□□□□ -1.18
CCDC54-201ENST00000261058 MX2P20592 715 aa7.67□□□□□ -1.18
CCDC54-201ENST00000261058 FGD1P98174 961 aa7.67□□□□□ -1.18
CCDC54-201ENST00000261058 RNFT1Q5M7Z0 435 aa7.67□□□□□ -1.18
CCDC54-201ENST00000261058 PMEPA1Q969W9 287 aa7.67□□□□□ -1.18
CCDC54-201ENST00000261058 ZNF428Q96B54 188 aa7.67□□□□□ -1.18
CCDC54-201ENST00000261058 UNCXA6NJT0 531 aa7.66□□□□□ -1.18
CCDC54-201ENST00000261058 KIF4AO95239 1232 aa7.66□□□□□ -1.18
CCDC54-201ENST00000261058 LDHBP07195 334 aaKnown RBP7.66□□□□□ -1.18
CCDC54-201ENST00000261058 ARAFP10398 606 aa7.66□□□□□ -1.18
CCDC54-201ENST00000261058 USPL1Q5W0Q7 1092 aa7.66□□□□□ -1.18
CCDC54-201ENST00000261058 ALG1LQ6GMV1 187 aa7.66□□□□□ -1.18
CCDC54-201ENST00000261058 KRT25Q7Z3Z0 450 aa7.66□□□□□ -1.18
CCDC54-201ENST00000261058 RAB44Q7Z6P3 723 aaPredicted RBP7.66□□□□□ -1.18
CCDC54-201ENST00000261058 TRPM4Q8TD43 1214 aa7.66□□□□□ -1.18
CCDC54-201ENST00000261058 TNFRSF25Q93038 417 aa7.66□□□□□ -1.18
CCDC54-201ENST00000261058 BHMTQ93088 406 aa7.66□□□□□ -1.18
CCDC54-201ENST00000261058 SETDB2Q96T68 719 aa7.66□□□□□ -1.18
CCDC54-201ENST00000261058 KLF15Q9UIH9 416 aa7.66□□□□□ -1.18
CCDC54-201ENST00000261058 WWC3Q9ULE0 1092 aa7.66□□□□□ -1.18
CCDC54-201ENST00000261058 EREGO14944 169 aa7.65□□□□□ -1.18
CCDC54-201ENST00000261058 BMP4P12644 408 aa7.65□□□□□ -1.18
CCDC54-201ENST00000261058 MAP2K3P46734 347 aa7.65□□□□□ -1.18
CCDC54-201ENST00000261058 NRLP54845 237 aa7.65□□□□□ -1.18
CCDC54-201ENST00000261058 KRT76Q01546 638 aa7.65□□□□□ -1.18
CCDC54-201ENST00000261058 NEUROD1Q13562 356 aa7.65□□□□□ -1.18
CCDC54-201ENST00000261058 ZNF326Q5BKZ1 582 aaKnown RBP7.65□□□□□ -1.18
CCDC54-201ENST00000261058 TTC39BQ5VTQ0 682 aaPredicted RBP7.65□□□□□ -1.18
CCDC54-201ENST00000261058 DHX32Q7L7V1 743 aaKnown RBP7.65□□□□□ -1.18
CCDC54-201ENST00000261058 SYT9Q86SS6 491 aa7.65□□□□□ -1.18
CCDC54-201ENST00000261058 GALNT12Q8IXK2 581 aa7.65□□□□□ -1.18
CCDC54-201ENST00000261058 PNMA5Q96PV4 448 aa7.65□□□□□ -1.18
CCDC54-201ENST00000261058 COL25A1Q9BXS0 654 aaPredicted RBP7.65□□□□□ -1.18
CCDC54-201ENST00000261058 SALL4Q9UJQ4 1053 aa7.65□□□□□ -1.18
CCDC54-201ENST00000261058 CYP2E1P05181 493 aaPredicted RBP7.64□□□□□ -1.19
CCDC54-201ENST00000261058 GPLD1P80108 840 aa7.64□□□□□ -1.19
CCDC54-201ENST00000261058 CCDC74AQ96AQ1 378 aa7.64□□□□□ -1.19
CCDC54-201ENST00000261058 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.64□□□□□ -1.19
CCDC54-201ENST00000261058 ADARB2-AS1A8MUL3 147 aa7.63□□□□□ -1.19
CCDC54-201ENST00000261058 CES1P23141 567 aa7.63□□□□□ -1.19
CCDC54-201ENST00000261058 VAMP1P23763 118 aa7.63□□□□□ -1.19
CCDC54-201ENST00000261058 GMPRP36959 345 aa7.63□□□□□ -1.19
CCDC54-201ENST00000261058 ATP2B2Q01814 1243 aa7.63□□□□□ -1.19
CCDC54-201ENST00000261058 PLAURQ03405 335 aa7.63□□□□□ -1.19
CCDC54-201ENST00000261058 PRR12Q9ULL5 1215 aa7.63□□□□□ -1.19
CCDC54-201ENST00000261058 IGF1RP08069 1367 aa7.62□□□□□ -1.19
CCDC54-201ENST00000261058 ZBTB42B2RXF5 422 aa7.62□□□□□ -1.19
CCDC54-201ENST00000261058 PSAPP07602 524 aa7.62□□□□□ -1.19
CCDC54-201ENST00000261058 ADH6P28332 368 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms