RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 TAF1LQ8IZX4 1826 aa27.26■■□□□ 1.95
SIX3-201ENST00000260653 CIAO1O76071 339 aa27.26■■□□□ 1.95
SIX3-201ENST00000260653 IFIT5Q13325 482 aaKnown RBP27.26■■□□□ 1.95
SIX3-201ENST00000260653 GREM2Q9H772 168 aa27.26■■□□□ 1.95
SIX3-201ENST00000260653 BECN1Q14457 450 aa27.26■■□□□ 1.95
SIX3-201ENST00000260653 RC3H1Q5TC82 1133 aaKnown RBP27.26■■□□□ 1.95
SIX3-201ENST00000260653 BCL11BQ9C0K0 894 aaPredicted RBP27.26■■□□□ 1.95
SIX3-201ENST00000260653 PDE8AO60658 829 aa27.25■■□□□ 1.95
SIX3-201ENST00000260653 ZNF652Q9Y2D9 606 aa27.25■■□□□ 1.95
SIX3-201ENST00000260653 PARP10Q53GL7 1025 aa27.25■■□□□ 1.95
SIX3-201ENST00000260653 KRT27Q7Z3Y8 459 aa27.25■■□□□ 1.95
SIX3-201ENST00000260653 UTP14AQ9BVJ6 771 aaKnown RBP27.25■■□□□ 1.95
SIX3-201ENST00000260653 SH3TC1Q8TE82 1336 aa27.24■■□□□ 1.95
SIX3-201ENST00000260653 DBNDD2Q9BQY9 259 aa27.24■■□□□ 1.95
SIX3-201ENST00000260653 TBC1D2Q9BYX2 928 aa27.24■■□□□ 1.95
SIX3-201ENST00000260653 GNPATO15228 680 aa27.24■■□□□ 1.95
SIX3-201ENST00000260653 ITGA6P23229 1130 aa27.24■■□□□ 1.95
SIX3-201ENST00000260653 TAF7LQ5H9L4 462 aa27.24■■□□□ 1.95
SIX3-201ENST00000260653 IL25Q9H293 177 aa27.24■■□□□ 1.95
SIX3-201ENST00000260653 BOLA2Q9H3K6 86 aa27.24■■□□□ 1.95
SIX3-201ENST00000260653 RPS6KA4O75676 772 aa27.23■■□□□ 1.95
SIX3-201ENST00000260653 HCLS1P14317 486 aaPredicted RBP27.23■■□□□ 1.95
SIX3-201ENST00000260653 CLEC4GQ6UXB4 293 aa27.22■■□□□ 1.95
SIX3-201ENST00000260653 SCN7AQ01118 1682 aa27.22■■□□□ 1.95
SIX3-201ENST00000260653 NTSR2O95665 410 aa27.22■■□□□ 1.95
SIX3-201ENST00000260653 AMIGO3Q86WK7 504 aa27.21■■□□□ 1.95
SIX3-201ENST00000260653 ZNF609O15014 1411 aa27.21■■□□□ 1.95
SIX3-201ENST00000260653 FAM196AQ6ZSG2 479 aa27.21■■□□□ 1.95
SIX3-201ENST00000260653 EVI5LQ96CN4 794 aa27.21■■□□□ 1.95
SIX3-201ENST00000260653 GPR108Q9NPR9 543 aa27.21■■□□□ 1.95
SIX3-201ENST00000260653 FBXO3Q9UK99 471 aa27.21■■□□□ 1.95
SIX3-201ENST00000260653 DDX60Q8IY21 1712 aaKnown RBP27.2■■□□□ 1.94
SIX3-201ENST00000260653 TIMM10P62072 90 aa27.2■■□□□ 1.94
SIX3-201ENST00000260653 NEUROD6Q96NK8 337 aa27.2■■□□□ 1.94
SIX3-201ENST00000260653 ANKRD18BA2A2Z9 1011 aa27.19■■□□□ 1.94
SIX3-201ENST00000260653 C4BP0C0L5 1744 aa27.19■■□□□ 1.94
SIX3-201ENST00000260653 ATP5JP18859 108 aa27.19■■□□□ 1.94
SIX3-201ENST00000260653 AK7Q96M32 723 aa27.19■■□□□ 1.94
SIX3-201ENST00000260653 BCL2L12Q9HB09 334 aa27.19■■□□□ 1.94
SIX3-201ENST00000260653 ANO2Q9NQ90 1003 aa27.19■■□□□ 1.94
SIX3-201ENST00000260653 CEP126Q9P2H0 1117 aa27.19■■□□□ 1.94
SIX3-201ENST00000260653 ZNF772Q68DY9 489 aaPredicted RBP27.18■■□□□ 1.94
SIX3-201ENST00000260653 LRRC4BQ9NT99 713 aa27.18■■□□□ 1.94
SIX3-201ENST00000260653 SRP68Q9UHB9 627 aaKnown RBP27.18■■□□□ 1.94
SIX3-201ENST00000260653 RTCBQ9Y3I0 505 aaKnown RBP27.18■■□□□ 1.94
SIX3-201ENST00000260653 USPL1Q5W0Q7 1092 aa27.18■■□□□ 1.94
SIX3-201ENST00000260653 NARFQ9UHQ1 456 aa27.18■■□□□ 1.94
SIX3-201ENST00000260653 A0A1B0GUL7 405 aa27.17■■□□□ 1.94
SIX3-201ENST00000260653 TRIM37O94972 964 aa27.17■■□□□ 1.94
SIX3-201ENST00000260653 RBM6P78332 1123 aaKnown RBP27.17■■□□□ 1.94
SIX3-201ENST00000260653 CWC27Q6UX04 472 aaKnown RBP27.17■■□□□ 1.94
SIX3-201ENST00000260653 LDHAL6AQ6ZMR3 332 aa27.17■■□□□ 1.94
SIX3-201ENST00000260653 RIC1Q4ADV7 1423 aa27.16■■□□□ 1.94
SIX3-201ENST00000260653 SGSM2O43147 1006 aa27.16■■□□□ 1.94
SIX3-201ENST00000260653 BICDL1Q6ZP65 573 aa27.16■■□□□ 1.94
SIX3-201ENST00000260653 EDC3Q96F86 508 aaKnown RBP27.16■■□□□ 1.94
SIX3-201ENST00000260653 DIAPH3Q9NSV4 1193 aa27.16■■□□□ 1.94
SIX3-201ENST00000260653 NDUFB9Q9Y6M9 179 aa27.16■■□□□ 1.94
SIX3-201ENST00000260653 LAMB2P55268 1798 aa27.16■■□□□ 1.94
SIX3-201ENST00000260653 TBC1D9BQ66K14 1250 aa27.15■■□□□ 1.94
SIX3-201ENST00000260653 RIPOR2Q9Y4F9 1068 aa27.15■■□□□ 1.94
SIX3-201ENST00000260653 UBE2Q2Q8WVN8 375 aa27.14■■□□□ 1.94
SIX3-201ENST00000260653 RGL2O15211 777 aa27.14■■□□□ 1.93
SIX3-201ENST00000260653 ARHGEF1Q92888 912 aaKnown RBP27.14■■□□□ 1.93
SIX3-201ENST00000260653 ZPR1O75312 459 aa27.13■■□□□ 1.93
SIX3-201ENST00000260653 CNNM1Q9NRU3 951 aa27.13■■□□□ 1.93
SIX3-201ENST00000260653 PHF14O94880 888 aa27.13■■□□□ 1.93
SIX3-201ENST00000260653 C4AP0C0L4 1744 aa27.13■■□□□ 1.93
SIX3-201ENST00000260653 FSD1Q9BTV5 496 aa27.13■■□□□ 1.93
SIX3-201ENST00000260653 LRP5O75197 1615 aa27.12■■□□□ 1.93
SIX3-201ENST00000260653 METTL24Q5JXM2 366 aa27.12■■□□□ 1.93
SIX3-201ENST00000260653 DNAJC2Q99543 621 aaKnown RBP27.12■■□□□ 1.93
SIX3-201ENST00000260653 HSCBQ8IWL3 235 aa27.12■■□□□ 1.93
SIX3-201ENST00000260653 CD2BP2O95400 341 aaKnown RBP27.11■■□□□ 1.93
SIX3-201ENST00000260653 SNX21Q969T3 373 aa27.11■■□□□ 1.93
SIX3-201ENST00000260653 HAUS7Q99871 368 aa27.11■■□□□ 1.93
SIX3-201ENST00000260653 SEC31BQ9NQW1 1179 aa27.11■■□□□ 1.93
SIX3-201ENST00000260653 AKAP2Q9Y2D5 859 aa27.11■■□□□ 1.93
SIX3-201ENST00000260653 ERFEQ4G0M1 354 aa27.11■■□□□ 1.93
SIX3-201ENST00000260653 HSP90B1P14625 803 aaKnown RBP27.1■■□□□ 1.93
SIX3-201ENST00000260653 ADORA1P30542 326 aa27.1■■□□□ 1.93
SIX3-201ENST00000260653 CCDC152Q4G0S7 254 aa27.1■■□□□ 1.93
SIX3-201ENST00000260653 RABEP1Q15276 862 aa27.09■■□□□ 1.93
SIX3-201ENST00000260653 RUFY2Q8WXA3 655 aa27.09■■□□□ 1.93
SIX3-201ENST00000260653 FAM227BQ96M60 508 aa27.09■■□□□ 1.93
SIX3-201ENST00000260653 ANO8Q9HCE9 1232 aaPredicted RBP27.09■■□□□ 1.93
SIX3-201ENST00000260653 VGLL2Q8N8G2 317 aa27.08■■□□□ 1.93
SIX3-201ENST00000260653 XAGE2Q96GT9 111 aa27.08■■□□□ 1.93
SIX3-201ENST00000260653 PALD1Q9ULE6 856 aa27.08■■□□□ 1.93
SIX3-201ENST00000260653 NMIQ13287 307 aaPredicted RBP27.08■■□□□ 1.92
SIX3-201ENST00000260653 TRAPPC3LQ5T215 181 aa27.08■■□□□ 1.92
SIX3-201ENST00000260653 LSG1Q9H089 658 aaKnown RBP27.08■■□□□ 1.92
SIX3-201ENST00000260653 HIP1O00291 1037 aa27.07■■□□□ 1.92
SIX3-201ENST00000260653 RFC4P35249 363 aa27.07■■□□□ 1.92
SIX3-201ENST00000260653 SETDB2Q96T68 719 aa27.07■■□□□ 1.92
SIX3-201ENST00000260653 COL24A1Q17RW2 1714 aa27.07■■□□□ 1.92
SIX3-201ENST00000260653 RAD50Q92878 1312 aa27.07■■□□□ 1.92
SIX3-201ENST00000260653 ATP2B3Q16720 1220 aa27.07■■□□□ 1.92
SIX3-201ENST00000260653 C3orf67Q6ZVT6 689 aa27.07■■□□□ 1.92
SIX3-201ENST00000260653 MCCP23508 829 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms