RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 BRD1O95696 1058 aa17.35■□□□□ 0.37
KCTD3-201ENST00000259154 FKBP4Q02790 459 aaKnown RBP eCLIP17.35■□□□□ 0.37
KCTD3-201ENST00000259154 TRDNQ13061 729 aa17.35■□□□□ 0.37
KCTD3-201ENST00000259154 TAF3Q5VWG9 929 aa17.35■□□□□ 0.37
KCTD3-201ENST00000259154 CPLX2Q6PUV4 134 aaKnown RBP17.35■□□□□ 0.37
KCTD3-201ENST00000259154 HSP90AB3PQ58FF7 597 aa17.34■□□□□ 0.37
KCTD3-201ENST00000259154 BRF1Q92994 677 aa17.34■□□□□ 0.37
KCTD3-201ENST00000259154 AKAP12Q02952 1782 aa17.34■□□□□ 0.37
KCTD3-201ENST00000259154 FER1L4A9Z1Z3 1794 aa17.34■□□□□ 0.37
KCTD3-201ENST00000259154 GLRX3O76003 335 aaKnown RBP17.34■□□□□ 0.37
KCTD3-201ENST00000259154 HAND2P61296 217 aa17.34■□□□□ 0.37
KCTD3-201ENST00000259154 BMS1Q14692 1282 aaKnown RBP17.34■□□□□ 0.37
KCTD3-201ENST00000259154 RHPN1Q8TCX5 695 aa17.34■□□□□ 0.37
KCTD3-201ENST00000259154 HDAC5Q9UQL6 1122 aa17.34■□□□□ 0.37
KCTD3-201ENST00000259154 TNRQ92752 1358 aa17.34■□□□□ 0.37
KCTD3-201ENST00000259154 RGS12O14924 1447 aa17.33■□□□□ 0.37
KCTD3-201ENST00000259154 TECPR2O15040 1411 aa17.33■□□□□ 0.37
KCTD3-201ENST00000259154 ZNF396Q96N95 335 aaPredicted RBP17.33■□□□□ 0.37
KCTD3-201ENST00000259154 MON2Q7Z3U7 1717 aa17.33■□□□□ 0.37
KCTD3-201ENST00000259154 RTL1A6NKG5 1358 aa17.33■□□□□ 0.37
KCTD3-201ENST00000259154 CBX8Q9HC52 389 aa17.33■□□□□ 0.36
KCTD3-201ENST00000259154 NDUFB9Q9Y6M9 179 aa17.33■□□□□ 0.36
KCTD3-201ENST00000259154 PI4KAP2A4QPH2 592 aa17.33■□□□□ 0.36
KCTD3-201ENST00000259154 PI4KAP1Q8N8J0 262 aa17.33■□□□□ 0.36
KCTD3-201ENST00000259154 PAXBP1Q9Y5B6 917 aa17.33■□□□□ 0.36
KCTD3-201ENST00000259154 CDK12Q9NYV4 1490 aaPredicted RBP17.33■□□□□ 0.36
KCTD3-201ENST00000259154 EVA1CP58658 441 aa17.32■□□□□ 0.36
KCTD3-201ENST00000259154 AKAP17AQ02040 695 aaKnown RBP17.32■□□□□ 0.36
KCTD3-201ENST00000259154 CCDC144CPQ8IYA2 1237 aa17.32■□□□□ 0.36
KCTD3-201ENST00000259154 ANO10Q9NW15 660 aa17.32■□□□□ 0.36
KCTD3-201ENST00000259154 RBM8AQ9Y5S9 174 aaKnown RBP17.32■□□□□ 0.36
KCTD3-201ENST00000259154 SLU7O95391 586 aaKnown RBP17.32■□□□□ 0.36
KCTD3-201ENST00000259154 DNA2P51530 1060 aa17.32■□□□□ 0.36
KCTD3-201ENST00000259154 SETQ01105 290 aaPredicted RBP17.32■□□□□ 0.36
KCTD3-201ENST00000259154 UNC5CLQ8IV45 518 aa17.32■□□□□ 0.36
KCTD3-201ENST00000259154 DDX19AQ9NUU7 478 aaKnown RBP17.32■□□□□ 0.36
KCTD3-201ENST00000259154 ATP10DQ9P241 1426 aa17.32■□□□□ 0.36
KCTD3-201ENST00000259154 NRKQ7Z2Y5 1582 aa17.32■□□□□ 0.36
KCTD3-201ENST00000259154 TERF1P54274 439 aa17.32■□□□□ 0.36
KCTD3-201ENST00000259154 ERCC6LQ2NKX8 1250 aa17.32■□□□□ 0.36
KCTD3-201ENST00000259154 NEK11Q8NG66 645 aa17.32■□□□□ 0.36
KCTD3-201ENST00000259154 PHAXQ9H814 394 aaKnown RBP17.32■□□□□ 0.36
KCTD3-201ENST00000259154 SMTNL1A8MU46 457 aa17.31■□□□□ 0.36
KCTD3-201ENST00000259154 IPO7O95373 1038 aaKnown RBP17.31■□□□□ 0.36
KCTD3-201ENST00000259154 KIF4BQ2VIQ3 1234 aa17.31■□□□□ 0.36
KCTD3-201ENST00000259154 PIK3R4Q99570 1358 aa17.31■□□□□ 0.36
KCTD3-201ENST00000259154 IL25Q9H293 177 aa17.31■□□□□ 0.36
KCTD3-201ENST00000259154 PLEKHO1Q53GL0 409 aaPredicted RBP17.3■□□□□ 0.36
KCTD3-201ENST00000259154 RUFY1Q96T51 708 aa17.3■□□□□ 0.36
KCTD3-201ENST00000259154 RSPH14Q9UHP6 348 aa17.3■□□□□ 0.36
KCTD3-201ENST00000259154 GNAT3A8MTJ3 354 aa17.3■□□□□ 0.36
KCTD3-201ENST00000259154 MARCKSP29966 332 aaPredicted RBP17.3■□□□□ 0.36
KCTD3-201ENST00000259154 KARSQ15046 597 aaKnown RBP17.3■□□□□ 0.36
KCTD3-201ENST00000259154 LARP1Q6PKG0 1096 aaKnown RBP17.3■□□□□ 0.36
KCTD3-201ENST00000259154 CCDC191Q8NCU4 936 aa17.3■□□□□ 0.36
KCTD3-201ENST00000259154 TOP1P11387 765 aaKnown RBP17.3■□□□□ 0.36
KCTD3-201ENST00000259154 PHF8Q9UPP1 1060 aa17.3■□□□□ 0.36
KCTD3-201ENST00000259154 ANKRD1Q15327 319 aa17.29■□□□□ 0.36
KCTD3-201ENST00000259154 ZNF397Q8NF99 534 aaPredicted RBP17.29■□□□□ 0.36
KCTD3-201ENST00000259154 IFNKQ9P0W0 207 aa17.29■□□□□ 0.36
KCTD3-201ENST00000259154 SLIT1O75093 1534 aa17.29■□□□□ 0.36
KCTD3-201ENST00000259154 CDC37L1Q7L3B6 337 aa17.29■□□□□ 0.36
KCTD3-201ENST00000259154 CLSTN1O94985 981 aa17.29■□□□□ 0.36
KCTD3-201ENST00000259154 PIP4K2AP48426 406 aaPredicted RBP17.29■□□□□ 0.36
KCTD3-201ENST00000259154 ARID5BQ14865 1188 aa17.29■□□□□ 0.36
KCTD3-201ENST00000259154 SH2B1Q9NRF2 756 aaPredicted RBP17.29■□□□□ 0.36
KCTD3-201ENST00000259154 DDX58O95786 925 aaKnown RBP17.28■□□□□ 0.36
KCTD3-201ENST00000259154 MPRIPQ6WCQ1 1025 aa17.28■□□□□ 0.36
KCTD3-201ENST00000259154 SNRKQ9NRH2 765 aa17.28■□□□□ 0.36
KCTD3-201ENST00000259154 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.28■□□□□ 0.36
KCTD3-201ENST00000259154 ZDHHC9Q9Y397 364 aa17.28■□□□□ 0.36
KCTD3-201ENST00000259154 AATKQ6ZMQ8 1374 aa17.28■□□□□ 0.36
KCTD3-201ENST00000259154 KCNQ3O43525 872 aa17.28■□□□□ 0.36
KCTD3-201ENST00000259154 RAI14Q9P0K7 980 aa17.28■□□□□ 0.36
KCTD3-201ENST00000259154 PUF60Q9UHX1 559 aaKnown RBP17.28■□□□□ 0.36
KCTD3-201ENST00000259154 ARHGAP23Q9P227 1491 aa17.28■□□□□ 0.36
KCTD3-201ENST00000259154 PTPRUQ92729 1446 aa17.28■□□□□ 0.36
KCTD3-201ENST00000259154 OTUD7BQ6GQQ9 843 aa17.28■□□□□ 0.36
KCTD3-201ENST00000259154 FEZ1Q99689 392 aa17.28■□□□□ 0.36
KCTD3-201ENST00000259154 A0A1B0GVL5 298 aa17.28■□□□□ 0.36
KCTD3-201ENST00000259154 FKBP15Q5T1M5 1219 aa17.28■□□□□ 0.36
KCTD3-201ENST00000259154 DDX46Q7L014 1031 aaKnown RBP17.28■□□□□ 0.36
KCTD3-201ENST00000259154 CCDC12Q8WUD4 166 aaPredicted RBP17.28■□□□□ 0.36
KCTD3-201ENST00000259154 TMEM2Q9UHN6 1383 aa17.27■□□□□ 0.36
KCTD3-201ENST00000259154 KRBA2Q6ZNG9 492 aa17.27■□□□□ 0.36
KCTD3-201ENST00000259154 CDC42BPGQ6DT37 1551 aa17.27■□□□□ 0.36
KCTD3-201ENST00000259154 SLC3A2P08195 630 aaKnown RBP17.27■□□□□ 0.35
KCTD3-201ENST00000259154 PPFIBP1Q86W92 1011 aa17.27■□□□□ 0.35
KCTD3-201ENST00000259154 STX1AQ16623 288 aa17.27■□□□□ 0.35
KCTD3-201ENST00000259154 DEF6Q9H4E7 631 aa17.27■□□□□ 0.35
KCTD3-201ENST00000259154 NCOA3Q9Y6Q9 1424 aa17.26■□□□□ 0.35
KCTD3-201ENST00000259154 JAK2O60674 1132 aa17.26■□□□□ 0.35
KCTD3-201ENST00000259154 CASQ1P31415 396 aa17.26■□□□□ 0.35
KCTD3-201ENST00000259154 IL17REQ8NFR9 667 aa17.26■□□□□ 0.35
KCTD3-201ENST00000259154 ECHDC1Q9NTX5 307 aa17.26■□□□□ 0.35
KCTD3-201ENST00000259154 SNX14Q9Y5W7 946 aa17.26■□□□□ 0.35
KCTD3-201ENST00000259154 JAKMIP3Q5VZ66 844 aa17.26■□□□□ 0.35
KCTD3-201ENST00000259154 UTP14AQ9BVJ6 771 aaKnown RBP17.26■□□□□ 0.35
KCTD3-201ENST00000259154 PEAK1Q9H792 1746 aa17.26■□□□□ 0.35
KCTD3-201ENST00000259154 BTBD11A6QL63 1104 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms