RNA–Protein interactions for RNA: ENST00000258947.7

CALCOCO2-201, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CALCOCO2, Length 3,682 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-201ENST00000258947 RNF20Q5VTR2 975 aa10.47□□□□□ -0.73
CALCOCO2-201ENST00000258947 BARGINQ6ZT62 677 aa10.47□□□□□ -0.73
CALCOCO2-201ENST00000258947 TNS2Q63HR2 1409 aa10.46□□□□□ -0.73
CALCOCO2-201ENST00000258947 IGHMBP2P38935 993 aaKnown RBP10.46□□□□□ -0.73
CALCOCO2-201ENST00000258947 GBP4Q96PP9 640 aa10.46□□□□□ -0.73
CALCOCO2-201ENST00000258947 RABL6Q3YEC7 729 aaPredicted RBP10.46□□□□□ -0.73
CALCOCO2-201ENST00000258947 VPS37DQ86XT2 251 aa10.46□□□□□ -0.73
CALCOCO2-201ENST00000258947 QTRT2Q9H974 415 aaKnown RBP10.46□□□□□ -0.73
CALCOCO2-201ENST00000258947 NHSL1Q5SYE7 1610 aa10.46□□□□□ -0.74
CALCOCO2-201ENST00000258947 PDE8AO60658 829 aa10.46□□□□□ -0.74
CALCOCO2-201ENST00000258947 APPP05067 770 aa10.46□□□□□ -0.74
CALCOCO2-201ENST00000258947 HSP90B1P14625 803 aaKnown RBP10.46□□□□□ -0.74
CALCOCO2-201ENST00000258947 CTSWP56202 376 aa10.46□□□□□ -0.74
CALCOCO2-201ENST00000258947 SNX21Q969T3 373 aa10.46□□□□□ -0.74
CALCOCO2-201ENST00000258947 AK7Q96M32 723 aa10.46□□□□□ -0.74
CALCOCO2-201ENST00000258947 SALL3Q9BXA9 1300 aa10.46□□□□□ -0.74
CALCOCO2-201ENST00000258947 IDH1O75874 414 aaKnown RBP10.45□□□□□ -0.74
CALCOCO2-201ENST00000258947 CPA1P15085 419 aa10.45□□□□□ -0.74
CALCOCO2-201ENST00000258947 PTF1AQ7RTS3 328 aa10.45□□□□□ -0.74
CALCOCO2-201ENST00000258947 CCDC129Q6ZRS4 1044 aa10.45□□□□□ -0.74
CALCOCO2-201ENST00000258947 SEPT12Q8IYM1 358 aa10.45□□□□□ -0.74
CALCOCO2-201ENST00000258947 IL25Q9H293 177 aa10.45□□□□□ -0.74
CALCOCO2-201ENST00000258947 PAG1Q9NWQ8 432 aa10.45□□□□□ -0.74
CALCOCO2-201ENST00000258947 RTCBQ9Y3I0 505 aaKnown RBP10.45□□□□□ -0.74
CALCOCO2-201ENST00000258947 RFC4P35249 363 aa10.45□□□□□ -0.74
CALCOCO2-201ENST00000258947 RFX5P48382 616 aaPredicted RBP10.45□□□□□ -0.74
CALCOCO2-201ENST00000258947 SUSD4Q5VX71 490 aa10.45□□□□□ -0.74
CALCOCO2-201ENST00000258947 NBPF5PQ86XG9 351 aaPredicted RBP10.45□□□□□ -0.74
CALCOCO2-201ENST00000258947 GJD4Q96KN9 370 aaPredicted RBP10.45□□□□□ -0.74
CALCOCO2-201ENST00000258947 TCEANC2Q96MN5 208 aa10.45□□□□□ -0.74
CALCOCO2-201ENST00000258947 MRC1P22897 1456 aa10.45□□□□□ -0.74
CALCOCO2-201ENST00000258947 A0A0D9SFI3 127 aa10.44□□□□□ -0.74
CALCOCO2-201ENST00000258947 LRRFIP1Q32MZ4 808 aaKnown RBP10.44□□□□□ -0.74
CALCOCO2-201ENST00000258947 XAGE2Q96GT9 111 aa10.44□□□□□ -0.74
CALCOCO2-201ENST00000258947 KIF2CQ99661 725 aa10.44□□□□□ -0.74
CALCOCO2-201ENST00000258947 TRPC5Q9UL62 973 aaPredicted RBP10.44□□□□□ -0.74
CALCOCO2-201ENST00000258947 RBM8AQ9Y5S9 174 aaKnown RBP10.44□□□□□ -0.74
CALCOCO2-201ENST00000258947 COL14A1Q05707 1796 aaKnown RBP10.44□□□□□ -0.74
CALCOCO2-201ENST00000258947 TAF5LO75529 589 aa10.44□□□□□ -0.74
CALCOCO2-201ENST00000258947 CCDC152Q4G0S7 254 aa10.44□□□□□ -0.74
CALCOCO2-201ENST00000258947 TTLL11Q8NHH1 800 aa10.44□□□□□ -0.74
CALCOCO2-201ENST00000258947 SETDB2Q96T68 719 aa10.44□□□□□ -0.74
CALCOCO2-201ENST00000258947 IQSEC3Q9UPP2 1182 aaPredicted RBP10.44□□□□□ -0.74
CALCOCO2-201ENST00000258947 ATP5JP18859 108 aa10.44□□□□□ -0.74
CALCOCO2-201ENST00000258947 ADORA1P30542 326 aa10.44□□□□□ -0.74
CALCOCO2-201ENST00000258947 CASP7P55210 303 aa10.44□□□□□ -0.74
CALCOCO2-201ENST00000258947 PTH1RQ03431 593 aa10.44□□□□□ -0.74
CALCOCO2-201ENST00000258947 CYP46A1Q9Y6A2 500 aa10.44□□□□□ -0.74
CALCOCO2-201ENST00000258947 LTBP4Q8N2S1 1624 aa10.43□□□□□ -0.74
CALCOCO2-201ENST00000258947 SPATA31A6Q5VVP1 1343 aa10.43□□□□□ -0.74
CALCOCO2-201ENST00000258947 EIF5P55010 431 aaKnown RBP10.43□□□□□ -0.74
CALCOCO2-201ENST00000258947 SEC62Q99442 399 aaKnown RBP10.43□□□□□ -0.74
CALCOCO2-201ENST00000258947 RAD50Q92878 1312 aa10.43□□□□□ -0.74
CALCOCO2-201ENST00000258947 ERVV-1B6SEH8 477 aa10.43□□□□□ -0.74
CALCOCO2-201ENST00000258947 PARP10Q53GL7 1025 aa10.43□□□□□ -0.74
CALCOCO2-201ENST00000258947 USPL1Q5W0Q7 1092 aa10.43□□□□□ -0.74
CALCOCO2-201ENST00000258947 SEC31BQ9NQW1 1179 aa10.43□□□□□ -0.74
CALCOCO2-201ENST00000258947 SRP68Q9UHB9 627 aaKnown RBP10.43□□□□□ -0.74
CALCOCO2-201ENST00000258947 DTNBO60941 627 aa10.43□□□□□ -0.74
CALCOCO2-201ENST00000258947 TRIM28Q13263 835 aaKnown RBP10.43□□□□□ -0.74
CALCOCO2-201ENST00000258947 INTS5Q6P9B9 1019 aaKnown RBP10.43□□□□□ -0.74
CALCOCO2-201ENST00000258947 ATG9AQ7Z3C6 839 aa10.43□□□□□ -0.74
CALCOCO2-201ENST00000258947 ZGPATQ8N5A5 531 aaKnown RBP10.43□□□□□ -0.74
CALCOCO2-201ENST00000258947 TMX3Q96JJ7 454 aa10.43□□□□□ -0.74
CALCOCO2-201ENST00000258947 C5P01031 1676 aa10.42□□□□□ -0.74
CALCOCO2-201ENST00000258947 AHDC1Q5TGY3 1603 aaPredicted RBP10.42□□□□□ -0.74
CALCOCO2-201ENST00000258947 CCDC171Q6TFL3 1326 aa10.42□□□□□ -0.74
CALCOCO2-201ENST00000258947 CHGBP05060 677 aa10.42□□□□□ -0.74
CALCOCO2-201ENST00000258947 MCM2P49736 904 aa10.42□□□□□ -0.74
CALCOCO2-201ENST00000258947 PDRG1Q9NUG6 133 aa10.42□□□□□ -0.74
CALCOCO2-201ENST00000258947 DISP2A7MBM2 1401 aa10.42□□□□□ -0.74
CALCOCO2-201ENST00000258947 PKD1L3Q7Z443 1732 aa10.42□□□□□ -0.74
CALCOCO2-201ENST00000258947 SNAP23O00161 211 aa10.42□□□□□ -0.74
CALCOCO2-201ENST00000258947 STK3Q13188 491 aa10.42□□□□□ -0.74
CALCOCO2-201ENST00000258947 SLFNL1Q499Z3 407 aa10.42□□□□□ -0.74
CALCOCO2-201ENST00000258947 BLOC1S2Q6QNY1 142 aa10.42□□□□□ -0.74
CALCOCO2-201ENST00000258947 PSMA5P28066 241 aa10.42□□□□□ -0.74
CALCOCO2-201ENST00000258947 SSFA2P28290 1259 aa10.42□□□□□ -0.74
CALCOCO2-201ENST00000258947 ANAPC15P60006 121 aa10.42□□□□□ -0.74
CALCOCO2-201ENST00000258947 PI16Q6UXB8 463 aa10.42□□□□□ -0.74
CALCOCO2-201ENST00000258947 LINC00116Q8NCU8 138 aa10.42□□□□□ -0.74
CALCOCO2-201ENST00000258947 TOMM22Q9NS69 142 aa10.42□□□□□ -0.74
CALCOCO2-201ENST00000258947 COL15A1P39059 1388 aa10.41□□□□□ -0.74
CALCOCO2-201ENST00000258947 KCPQ6ZWJ8 1503 aa10.41□□□□□ -0.74
CALCOCO2-201ENST00000258947 UBN2Q6ZU65 1347 aa10.41□□□□□ -0.74
CALCOCO2-201ENST00000258947 RASEFQ8IZ41 740 aa10.41□□□□□ -0.74
CALCOCO2-201ENST00000258947 ABCF2Q9UG63 623 aa10.41□□□□□ -0.74
CALCOCO2-201ENST00000258947 SNX14Q9Y5W7 946 aa10.41□□□□□ -0.74
CALCOCO2-201ENST00000258947 VIRMAQ69YN4 1812 aaKnown RBP10.41□□□□□ -0.74
CALCOCO2-201ENST00000258947 TRIM37O94972 964 aa10.41□□□□□ -0.74
CALCOCO2-201ENST00000258947 SLC5A1P13866 664 aa10.41□□□□□ -0.74
CALCOCO2-201ENST00000258947 HSPA4P34932 840 aa10.41□□□□□ -0.74
CALCOCO2-201ENST00000258947 MCMDC2Q4G0Z9 681 aa10.41□□□□□ -0.74
CALCOCO2-201ENST00000258947 CDC5LQ99459 802 aaKnown RBP10.41□□□□□ -0.74
CALCOCO2-201ENST00000258947 LSG1Q9H089 658 aaKnown RBP10.41□□□□□ -0.74
CALCOCO2-201ENST00000258947 ANTXR1Q9H6X2 564 aa10.41□□□□□ -0.74
CALCOCO2-201ENST00000258947 NUCB2P80303 420 aa10.4□□□□□ -0.74
CALCOCO2-201ENST00000258947 ZNF589Q86UQ0 364 aaPredicted RBP10.4□□□□□ -0.74
CALCOCO2-201ENST00000258947 FNBP4Q8N3X1 1017 aaPredicted RBP10.4□□□□□ -0.74
CALCOCO2-201ENST00000258947 KBTBD3Q8NAB2 608 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms