RNA–Protein interactions for RNA: ENST00000257818.2

LMO2-201, Transcript of LIM domain only 2, humanhuman

TSL 1 (best) BASIC

Gene LMO2, Length 2,294 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-201ENST00000257818 PCDH11YQ9BZA8 1340 aa29.39■■■□□ 2.3
LMO2-201ENST00000257818 CCDC171Q6TFL3 1326 aa29.39■■■□□ 2.29
LMO2-201ENST00000257818 COL9A3Q14050 684 aaPredicted RBP29.38■■■□□ 2.29
LMO2-201ENST00000257818 TPCN1Q9ULQ1 816 aa29.38■■■□□ 2.29
LMO2-201ENST00000257818 PA2G4Q9UQ80 394 aaKnown RBP29.38■■■□□ 2.29
LMO2-201ENST00000257818 IL2RBP14784 551 aa29.38■■■□□ 2.29
LMO2-201ENST00000257818 KIAA1524Q8TCG1 905 aa29.38■■■□□ 2.29
LMO2-201ENST00000257818 SNRPA1P09661 255 aaKnown RBP29.37■■■□□ 2.29
LMO2-201ENST00000257818 PIP4K2AP48426 406 aaPredicted RBP29.37■■■□□ 2.29
LMO2-201ENST00000257818 FMNL2Q96PY5 1086 aa29.37■■■□□ 2.29
LMO2-201ENST00000257818 PYCARDQ9ULZ3 195 aa29.37■■■□□ 2.29
LMO2-201ENST00000257818 DDX58O95786 925 aaKnown RBP29.37■■■□□ 2.29
LMO2-201ENST00000257818 TTC6Q86TZ1 520 aa29.37■■■□□ 2.29
LMO2-201ENST00000257818 CCDC94Q9BW85 323 aaPredicted RBP29.37■■■□□ 2.29
LMO2-201ENST00000257818 C9orf78Q9NZ63 289 aaPredicted RBP29.37■■■□□ 2.29
LMO2-201ENST00000257818 RBM8AQ9Y5S9 174 aaKnown RBP29.37■■■□□ 2.29
LMO2-201ENST00000257818 ALDH1L1O75891 902 aa29.36■■■□□ 2.29
LMO2-201ENST00000257818 EVI5LQ96CN4 794 aa29.36■■■□□ 2.29
LMO2-201ENST00000257818 CREB3L3Q68CJ9 461 aa29.36■■■□□ 2.29
LMO2-201ENST00000257818 PRDM4Q9UKN5 801 aa29.36■■■□□ 2.29
LMO2-201ENST00000257818 IFIT2P09913 472 aaKnown RBP29.35■■■□□ 2.29
LMO2-201ENST00000257818 CCDC192P0DO97 292 aa29.35■■■□□ 2.29
LMO2-201ENST00000257818 XAGE3Q8WTP9 111 aa29.34■■■□□ 2.29
LMO2-201ENST00000257818 FAM227BQ96M60 508 aa29.34■■■□□ 2.29
LMO2-201ENST00000257818 ZKSCAN1P17029 563 aaPredicted RBP29.34■■■□□ 2.29
LMO2-201ENST00000257818 CDC37L1Q7L3B6 337 aa29.34■■■□□ 2.29
LMO2-201ENST00000257818 GPATCH3Q96I76 525 aa29.34■■■□□ 2.29
LMO2-201ENST00000257818 LARP1BQ659C4 914 aaKnown RBP29.33■■■□□ 2.29
LMO2-201ENST00000257818 COPS6Q7L5N1 327 aa29.33■■■□□ 2.29
LMO2-201ENST00000257818 RIC3Q7Z5B4 369 aa29.33■■■□□ 2.29
LMO2-201ENST00000257818 SPC24Q8NBT2 197 aa29.33■■■□□ 2.29
LMO2-201ENST00000257818 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.33■■■□□ 2.29
LMO2-201ENST00000257818 FAM177BA6PVY3 158 aa29.33■■■□□ 2.29
LMO2-201ENST00000257818 AACSQ86V21 672 aa29.33■■■□□ 2.29
LMO2-201ENST00000257818 MAP4K1Q92918 833 aa29.33■■■□□ 2.29
LMO2-201ENST00000257818 FAM173BQ6P4H8 233 aa29.32■■■□□ 2.28
LMO2-201ENST00000257818 SMAP1Q8IYB5 467 aaPredicted RBP29.32■■■□□ 2.28
LMO2-201ENST00000257818 LINS1Q8NG48 757 aa29.32■■■□□ 2.28
LMO2-201ENST00000257818 LIG1P18858 919 aa29.32■■■□□ 2.28
LMO2-201ENST00000257818 NMIQ13287 307 aaPredicted RBP29.32■■■□□ 2.28
LMO2-201ENST00000257818 FERMT3Q86UX7 667 aa29.32■■■□□ 2.28
LMO2-201ENST00000257818 KRT85P78386 507 aa29.31■■■□□ 2.28
LMO2-201ENST00000257818 ERC1Q8IUD2 1116 aa29.31■■■□□ 2.28
LMO2-201ENST00000257818 KIF3AQ9Y496 699 aa29.31■■■□□ 2.28
LMO2-201ENST00000257818 SLC27A2O14975 620 aa29.31■■■□□ 2.28
LMO2-201ENST00000257818 BTG4Q9NY30 223 aa29.31■■■□□ 2.28
LMO2-201ENST00000257818 MRVI1Q9Y6F6 885 aa29.31■■■□□ 2.28
LMO2-201ENST00000257818 FAM200AQ8TCP9 573 aa29.3■■■□□ 2.28
LMO2-201ENST00000257818 CHMP3Q9Y3E7 222 aa29.3■■■□□ 2.28
LMO2-201ENST00000257818 ELP1O95163 1332 aa29.29■■■□□ 2.28
LMO2-201ENST00000257818 TPM3P06753 285 aa29.29■■■□□ 2.28
LMO2-201ENST00000257818 LRP10Q7Z4F1 713 aa29.29■■■□□ 2.28
LMO2-201ENST00000257818 IGKV5-2P06315 115 aa29.29■■■□□ 2.28
LMO2-201ENST00000257818 CAMK4Q16566 473 aa29.29■■■□□ 2.28
LMO2-201ENST00000257818 MAP3K11Q16584 847 aa29.29■■■□□ 2.28
LMO2-201ENST00000257818 SHANK3Q9BYB0 1731 aa29.29■■■□□ 2.28
LMO2-201ENST00000257818 ERVV-2B6SEH9 535 aa29.28■■■□□ 2.28
LMO2-201ENST00000257818 KCNJ4P48050 445 aa29.28■■■□□ 2.28
LMO2-201ENST00000257818 NUP62CLQ9H1M0 184 aa29.28■■■□□ 2.28
LMO2-201ENST00000257818 SNRKQ9NRH2 765 aa29.28■■■□□ 2.28
LMO2-201ENST00000257818 ROBO1Q9Y6N7 1651 aa29.28■■■□□ 2.28
LMO2-201ENST00000257818 GRM8O00222 908 aa29.28■■■□□ 2.28
LMO2-201ENST00000257818 SASH1O94885 1247 aa29.28■■■□□ 2.28
LMO2-201ENST00000257818 TYRO3Q06418 890 aa29.28■■■□□ 2.28
LMO2-201ENST00000257818 NKX1-1Q15270 411 aaPredicted RBP29.28■■■□□ 2.28
LMO2-201ENST00000257818 TAF6LQ9Y6J9 622 aa29.28■■■□□ 2.28
LMO2-201ENST00000257818 EAF2Q96CJ1 260 aaPredicted RBP29.27■■■□□ 2.28
LMO2-201ENST00000257818 TCEANC2Q96MN5 208 aa29.27■■■□□ 2.28
LMO2-201ENST00000257818 BCL2L12Q9HB09 334 aa29.27■■■□□ 2.28
LMO2-201ENST00000257818 GLI3P10071 1580 aa29.26■■■□□ 2.28
LMO2-201ENST00000257818 A0A0D9SFI3 127 aa29.26■■■□□ 2.27
LMO2-201ENST00000257818 KAZALD1Q96I82 304 aa29.26■■■□□ 2.27
LMO2-201ENST00000257818 PSMA5P28066 241 aa29.25■■■□□ 2.27
LMO2-201ENST00000257818 ANKRD13DQ6ZTN6 518 aa29.25■■■□□ 2.27
LMO2-201ENST00000257818 LUZP1Q86V48 1076 aa29.25■■■□□ 2.27
LMO2-201ENST00000257818 SUCLG2Q96I99 432 aa29.25■■■□□ 2.27
LMO2-201ENST00000257818 MYD88Q99836 296 aa29.25■■■□□ 2.27
LMO2-201ENST00000257818 GOLGA6L6A8MZA4 724 aa29.25■■■□□ 2.27
LMO2-201ENST00000257818 CCDC8Q9H0W5 538 aaPredicted RBP29.25■■■□□ 2.27
LMO2-201ENST00000257818 TLR7Q9NYK1 1049 aaKnown RBP29.25■■■□□ 2.27
LMO2-201ENST00000257818 HIP1O00291 1037 aa29.24■■■□□ 2.27
LMO2-201ENST00000257818 PDIA4P13667 645 aaKnown RBP29.24■■■□□ 2.27
LMO2-201ENST00000257818 PDCP20941 246 aa29.24■■■□□ 2.27
LMO2-201ENST00000257818 PTGS1P23219 599 aa29.24■■■□□ 2.27
LMO2-201ENST00000257818 NEXNQ0ZGT2 675 aa29.24■■■□□ 2.27
LMO2-201ENST00000257818 METTL22Q9BUU2 404 aaPredicted RBP29.24■■■□□ 2.27
LMO2-201ENST00000257818 RIOK3O14730 519 aaKnown RBP29.23■■■□□ 2.27
LMO2-201ENST00000257818 TOB2Q14106 344 aaPredicted RBP29.23■■■□□ 2.27
LMO2-201ENST00000257818 CKAP2LQ8IYA6 745 aa29.23■■■□□ 2.27
LMO2-201ENST00000257818 PRDM10Q9NQV6 1147 aa29.23■■■□□ 2.27
LMO2-201ENST00000257818 DACT1Q9NYF0 836 aa29.23■■■□□ 2.27
LMO2-201ENST00000257818 UTYO14607 1347 aa29.23■■■□□ 2.27
LMO2-201ENST00000257818 NEURL1BA8MQ27 555 aa29.23■■■□□ 2.27
LMO2-201ENST00000257818 BLOC1S2Q6QNY1 142 aa29.23■■■□□ 2.27
LMO2-201ENST00000257818 PTCD1O75127 700 aaKnown RBP29.22■■■□□ 2.27
LMO2-201ENST00000257818 RPS6KB1P23443 525 aa29.22■■■□□ 2.27
LMO2-201ENST00000257818 MED23Q9ULK4 1368 aa29.22■■■□□ 2.27
LMO2-201ENST00000257818 BICC1Q9H694 974 aaKnown RBP29.22■■■□□ 2.27
LMO2-201ENST00000257818 CBX8Q9HC52 389 aa29.22■■■□□ 2.27
LMO2-201ENST00000257818 TFIP11Q9UBB9 837 aaKnown RBP29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms