RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 EYA2O00167 538 aa23.07■■□□□ 1.28
TRIM47-201ENST00000254816 ERC2O15083 957 aa23.07■■□□□ 1.28
TRIM47-201ENST00000254816 NFKBIBQ15653 356 aa23.07■■□□□ 1.28
TRIM47-201ENST00000254816 FAM196AQ6ZSG2 479 aa23.07■■□□□ 1.28
TRIM47-201ENST00000254816 RPS6KA4O75676 772 aa23.06■■□□□ 1.28
TRIM47-201ENST00000254816 TRIM37O94972 964 aa23.06■■□□□ 1.28
TRIM47-201ENST00000254816 UTP14AQ9BVJ6 771 aaKnown RBP23.06■■□□□ 1.28
TRIM47-201ENST00000254816 PDE8AO60658 829 aa23.06■■□□□ 1.28
TRIM47-201ENST00000254816 HCLS1P14317 486 aaPredicted RBP23.06■■□□□ 1.28
TRIM47-201ENST00000254816 CHMLP26374 656 aa23.06■■□□□ 1.28
TRIM47-201ENST00000254816 RBM25P49756 843 aaKnown RBP23.06■■□□□ 1.28
TRIM47-201ENST00000254816 RBM6P78332 1123 aaKnown RBP23.06■■□□□ 1.28
TRIM47-201ENST00000254816 IFIT5Q13325 482 aaKnown RBP23.06■■□□□ 1.28
TRIM47-201ENST00000254816 LRRC4BQ9NT99 713 aa23.05■■□□□ 1.28
TRIM47-201ENST00000254816 SRP68Q9UHB9 627 aaKnown RBP23.05■■□□□ 1.28
TRIM47-201ENST00000254816 DBNLQ9UJU6 430 aaKnown RBP23.05■■□□□ 1.28
TRIM47-201ENST00000254816 ZNF652Q9Y2D9 606 aa23.05■■□□□ 1.28
TRIM47-201ENST00000254816 ITGA6P23229 1130 aa23.05■■□□□ 1.28
TRIM47-201ENST00000254816 IL15P40933 162 aaPredicted RBP23.05■■□□□ 1.28
TRIM47-201ENST00000254816 TAF7LQ5H9L4 462 aa23.05■■□□□ 1.28
TRIM47-201ENST00000254816 CNTROBQ8N137 903 aa23.05■■□□□ 1.28
TRIM47-201ENST00000254816 SH3TC1Q8TE82 1336 aa23.04■■□□□ 1.28
TRIM47-201ENST00000254816 PARP10Q53GL7 1025 aa23.04■■□□□ 1.28
TRIM47-201ENST00000254816 USPL1Q5W0Q7 1092 aa23.03■■□□□ 1.28
TRIM47-201ENST00000254816 BICDL1Q6ZP65 573 aa23.03■■□□□ 1.28
TRIM47-201ENST00000254816 DBNDD2Q9BQY9 259 aa23.03■■□□□ 1.28
TRIM47-201ENST00000254816 BOLA2Q9H3K6 86 aa23.03■■□□□ 1.28
TRIM47-201ENST00000254816 BCL2L12Q9HB09 334 aa23.03■■□□□ 1.28
TRIM47-201ENST00000254816 C4AP0C0L4 1744 aa23.03■■□□□ 1.28
TRIM47-201ENST00000254816 CASZ1Q86V15 1759 aa23.03■■□□□ 1.28
TRIM47-201ENST00000254816 NTSR2O95665 410 aa23.03■■□□□ 1.28
TRIM47-201ENST00000254816 RTCBQ9Y3I0 505 aaKnown RBP23.03■■□□□ 1.28
TRIM47-201ENST00000254816 LAMB2P55268 1798 aa23.02■■□□□ 1.28
TRIM47-201ENST00000254816 CIAO1O76071 339 aa23.02■■□□□ 1.28
TRIM47-201ENST00000254816 CLEC4GQ6UXB4 293 aa23.02■■□□□ 1.28
TRIM47-201ENST00000254816 ESYT1Q9BSJ8 1104 aa23.02■■□□□ 1.28
TRIM47-201ENST00000254816 USP26Q9BXU7 913 aa23.02■■□□□ 1.28
TRIM47-201ENST00000254816 TIMM10P62072 90 aa23.02■■□□□ 1.28
TRIM47-201ENST00000254816 PHF14O94880 888 aa23.01■■□□□ 1.27
TRIM47-201ENST00000254816 TBC1D9BQ66K14 1250 aa23.01■■□□□ 1.27
TRIM47-201ENST00000254816 NEUROD6Q96NK8 337 aa23.01■■□□□ 1.27
TRIM47-201ENST00000254816 SPEF2Q9C093 1822 aa23.01■■□□□ 1.27
TRIM47-201ENST00000254816 ANKRD18BA2A2Z9 1011 aa23.01■■□□□ 1.27
TRIM47-201ENST00000254816 ARHGEF1Q92888 912 aaKnown RBP23.01■■□□□ 1.27
TRIM47-201ENST00000254816 IL25Q9H293 177 aa23.01■■□□□ 1.27
TRIM47-201ENST00000254816 NARFQ9UHQ1 456 aa23.01■■□□□ 1.27
TRIM47-201ENST00000254816 BECN1Q14457 450 aa22.99■■□□□ 1.27
TRIM47-201ENST00000254816 KIF2CQ99661 725 aa22.99■■□□□ 1.27
TRIM47-201ENST00000254816 AK7Q96M32 723 aa22.99■■□□□ 1.27
TRIM47-201ENST00000254816 ZNF609O15014 1411 aa22.99■■□□□ 1.27
TRIM47-201ENST00000254816 ZPR1O75312 459 aa22.98■■□□□ 1.27
TRIM47-201ENST00000254816 REC8O95072 547 aa22.98■■□□□ 1.27
TRIM47-201ENST00000254816 CEP126Q9P2H0 1117 aa22.98■■□□□ 1.27
TRIM47-201ENST00000254816 NDUFB9Q9Y6M9 179 aa22.98■■□□□ 1.27
TRIM47-201ENST00000254816 EIF5BO60841 1220 aaKnown RBP22.98■■□□□ 1.27
TRIM47-201ENST00000254816 LDHAL6AQ6ZMR3 332 aa22.98■■□□□ 1.27
TRIM47-201ENST00000254816 UBR3Q6ZT12 1888 aa22.98■■□□□ 1.27
TRIM47-201ENST00000254816 EDC3Q96F86 508 aaKnown RBP22.97■■□□□ 1.27
TRIM47-201ENST00000254816 GPR108Q9NPR9 543 aa22.97■■□□□ 1.27
TRIM47-201ENST00000254816 A0A1B0GUL7 405 aa22.97■■□□□ 1.27
TRIM47-201ENST00000254816 ERFEQ4G0M1 354 aa22.97■■□□□ 1.27
TRIM47-201ENST00000254816 EVI5LQ96CN4 794 aa22.97■■□□□ 1.27
TRIM47-201ENST00000254816 TAF1P21675 1872 aa22.96■■□□□ 1.27
TRIM47-201ENST00000254816 RIC1Q4ADV7 1423 aa22.96■■□□□ 1.27
TRIM47-201ENST00000254816 SEC31BQ9NQW1 1179 aa22.96■■□□□ 1.27
TRIM47-201ENST00000254816 CNNM1Q9NRU3 951 aa22.96■■□□□ 1.27
TRIM47-201ENST00000254816 FBXO3Q9UK99 471 aa22.96■■□□□ 1.27
TRIM47-201ENST00000254816 RIPOR2Q9Y4F9 1068 aa22.96■■□□□ 1.27
TRIM47-201ENST00000254816 ATP5JP18859 108 aa22.96■■□□□ 1.27
TRIM47-201ENST00000254816 RXRBP28702 533 aa22.96■■□□□ 1.27
TRIM47-201ENST00000254816 CWC27Q6UX04 472 aaKnown RBP22.96■■□□□ 1.27
TRIM47-201ENST00000254816 TBC1D2Q9BYX2 928 aa22.96■■□□□ 1.27
TRIM47-201ENST00000254816 SLKQ9H2G2 1235 aaPredicted RBP22.96■■□□□ 1.27
TRIM47-201ENST00000254816 FRAT2O75474 233 aaPredicted RBP22.95■■□□□ 1.26
TRIM47-201ENST00000254816 TRAPPC3LQ5T215 181 aa22.95■■□□□ 1.26
TRIM47-201ENST00000254816 ANO2Q9NQ90 1003 aa22.95■■□□□ 1.26
TRIM47-201ENST00000254816 COL24A1Q17RW2 1714 aa22.94■■□□□ 1.26
TRIM47-201ENST00000254816 RFC4P35249 363 aa22.94■■□□□ 1.26
TRIM47-201ENST00000254816 METTL24Q5JXM2 366 aa22.94■■□□□ 1.26
TRIM47-201ENST00000254816 DNAJC2Q99543 621 aaKnown RBP22.93■■□□□ 1.26
TRIM47-201ENST00000254816 COL4A1P02462 1669 aa22.93■■□□□ 1.26
TRIM47-201ENST00000254816 ADORA1P30542 326 aa22.93■■□□□ 1.26
TRIM47-201ENST00000254816 C3orf67Q6ZVT6 689 aa22.93■■□□□ 1.26
TRIM47-201ENST00000254816 SETDB2Q96T68 719 aa22.93■■□□□ 1.26
TRIM47-201ENST00000254816 DIAPH3Q9NSV4 1193 aa22.93■■□□□ 1.26
TRIM47-201ENST00000254816 RGS17Q9UGC6 210 aaPredicted RBP22.93■■□□□ 1.26
TRIM47-201ENST00000254816 LRP5O75197 1615 aa22.92■■□□□ 1.26
TRIM47-201ENST00000254816 CCDC152Q4G0S7 254 aa22.92■■□□□ 1.26
TRIM47-201ENST00000254816 PROM2Q8N271 834 aa22.92■■□□□ 1.26
TRIM47-201ENST00000254816 CCDC24Q8N4L8 307 aa22.92■■□□□ 1.26
TRIM47-201ENST00000254816 FSD1Q9BTV5 496 aa22.92■■□□□ 1.26
TRIM47-201ENST00000254816 SGSM2O43147 1006 aa22.91■■□□□ 1.26
TRIM47-201ENST00000254816 GTF2E1P29083 439 aaPredicted RBP22.91■■□□□ 1.26
TRIM47-201ENST00000254816 SLC27A3Q5K4L6 730 aa22.91■■□□□ 1.26
TRIM47-201ENST00000254816 ABCC12Q96J65 1359 aa22.91■■□□□ 1.26
TRIM47-201ENST00000254816 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.91■■□□□ 1.26
TRIM47-201ENST00000254816 RGL2O15211 777 aa22.91■■□□□ 1.26
TRIM47-201ENST00000254816 AKAP2Q9Y2D5 859 aa22.91■■□□□ 1.26
TRIM47-201ENST00000254816 TXNRD1Q16881 649 aa22.9■■□□□ 1.26
TRIM47-201ENST00000254816 XAGE2Q96GT9 111 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms