RNA–Protein interactions for RNA: ENST00000254644.12

MRPL35-201, Transcript of mitochondrial ribosomal protein L35, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MRPL35, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35-201ENST00000254644 AOC3Q16853 763 aa16.96■□□□□ 0.31
MRPL35-201ENST00000254644 DDX46Q7L014 1031 aaKnown RBP16.96■□□□□ 0.31
MRPL35-201ENST00000254644 TMX4Q9H1E5 349 aaPredicted RBP16.96■□□□□ 0.31
MRPL35-201ENST00000254644 ZNRF3Q9ULT6 936 aa16.96■□□□□ 0.31
MRPL35-201ENST00000254644 COL4A1P02462 1669 aa16.96■□□□□ 0.31
MRPL35-201ENST00000254644 APAF1O14727 1248 aa16.95■□□□□ 0.3
MRPL35-201ENST00000254644 CXCL9Q07325 125 aa16.95■□□□□ 0.3
MRPL35-201ENST00000254644 KIAA2012Q0VF49 1180 aa16.95■□□□□ 0.3
MRPL35-201ENST00000254644 USP50Q70EL3 339 aaPredicted RBP16.95■□□□□ 0.3
MRPL35-201ENST00000254644 TMC4Q7Z404 712 aa16.95■□□□□ 0.3
MRPL35-201ENST00000254644 MPNDQ8N594 471 aa16.95■□□□□ 0.3
MRPL35-201ENST00000254644 IFT57Q9NWB7 429 aa16.95■□□□□ 0.3
MRPL35-201ENST00000254644 POLR2AP24928 1970 aaKnown RBP16.95■□□□□ 0.3
MRPL35-201ENST00000254644 RASSF10A6NK89 507 aa16.94■□□□□ 0.3
MRPL35-201ENST00000254644 LMOD1P29536 600 aaPredicted RBP16.94■□□□□ 0.3
MRPL35-201ENST00000254644 VEGFBP49765 207 aa16.94■□□□□ 0.3
MRPL35-201ENST00000254644 DPP8Q6V1X1 898 aaPredicted RBP16.94■□□□□ 0.3
MRPL35-201ENST00000254644 GPRC5DQ9NZD1 345 aa16.94■□□□□ 0.3
MRPL35-201ENST00000254644 ATP5J2-PTCD1G3V325 749 aa16.93■□□□□ 0.3
MRPL35-201ENST00000254644 FAM89AQ96GI7 184 aa16.93■□□□□ 0.3
MRPL35-201ENST00000254644 CACNA1FO60840 1977 aa16.92■□□□□ 0.3
MRPL35-201ENST00000254644 GNAI1P63096 354 aa16.92■□□□□ 0.3
MRPL35-201ENST00000254644 PIAS4Q8N2W9 510 aaPredicted RBP16.92■□□□□ 0.3
MRPL35-201ENST00000254644 CALD1Q05682 793 aaKnown RBP16.91■□□□□ 0.3
MRPL35-201ENST00000254644 CELF1Q92879 486 aaKnown RBP16.91■□□□□ 0.3
MRPL35-201ENST00000254644 ZNF428Q96B54 188 aa16.91■□□□□ 0.3
MRPL35-201ENST00000254644 PHAXQ9H814 394 aaKnown RBP16.91■□□□□ 0.3
MRPL35-201ENST00000254644 ADARB2Q9NS39 739 aaKnown RBP16.91■□□□□ 0.3
MRPL35-201ENST00000254644 PGAP2Q9UHJ9 254 aa16.91■□□□□ 0.3
MRPL35-201ENST00000254644 MYH3P11055 1940 aa16.91■□□□□ 0.3
MRPL35-201ENST00000254644 THSD7BQ9C0I4 1608 aa16.91■□□□□ 0.3
MRPL35-201ENST00000254644 SCN9AQ15858 1988 aa16.91■□□□□ 0.3
MRPL35-201ENST00000254644 CDHR2Q9BYE9 1310 aa16.91■□□□□ 0.3
MRPL35-201ENST00000254644 YDJCA8MPS7 323 aa16.9■□□□□ 0.3
MRPL35-201ENST00000254644 DEFB115Q30KQ5 88 aa16.9■□□□□ 0.3
MRPL35-201ENST00000254644 CIAPIN1Q6FI81 312 aa16.9■□□□□ 0.3
MRPL35-201ENST00000254644 TNS4Q8IZW8 715 aa16.9■□□□□ 0.3
MRPL35-201ENST00000254644 C8orf58Q8NAV2 365 aa16.9■□□□□ 0.3
MRPL35-201ENST00000254644 PSME4Q14997 1843 aa16.89■□□□□ 0.29
MRPL35-201ENST00000254644 FOXN1O15353 648 aa16.89■□□□□ 0.29
MRPL35-201ENST00000254644 GMPSP49915 693 aaPredicted RBP16.89■□□□□ 0.29
MRPL35-201ENST00000254644 FMR1Q06787 632 aaKnown RBP eCLIP16.89■□□□□ 0.29
MRPL35-201ENST00000254644 CST9Q5W186 159 aa16.89■□□□□ 0.29
MRPL35-201ENST00000254644 ZBTB38Q8NAP3 1195 aaPredicted RBP16.89■□□□□ 0.29
MRPL35-201ENST00000254644 WBP1LQ9NX94 342 aa16.89■□□□□ 0.29
MRPL35-201ENST00000254644 ELL2O00472 640 aaPredicted RBP16.88■□□□□ 0.29
MRPL35-201ENST00000254644 IRS4O14654 1257 aaPredicted RBP16.88■□□□□ 0.29
MRPL35-201ENST00000254644 TNIP1Q15025 636 aa16.88■□□□□ 0.29
MRPL35-201ENST00000254644 RIC3Q7Z5B4 369 aa16.88■□□□□ 0.29
MRPL35-201ENST00000254644 RAD17O75943 681 aa16.87■□□□□ 0.29
MRPL35-201ENST00000254644 HIRAP54198 1017 aaPredicted RBP16.87■□□□□ 0.29
MRPL35-201ENST00000254644 CCDC184Q52MB2 194 aa16.87■□□□□ 0.29
MRPL35-201ENST00000254644 CCDC191Q8NCU4 936 aa16.87■□□□□ 0.29
MRPL35-201ENST00000254644 POLLQ9UGP5 575 aa16.87■□□□□ 0.29
MRPL35-201ENST00000254644 WDR33Q9C0J8 1336 aaKnown RBP16.87■□□□□ 0.29
MRPL35-201ENST00000254644 TRAF5O00463 557 aa16.86■□□□□ 0.29
MRPL35-201ENST00000254644 RPS8P62241 208 aaKnown RBP16.86■□□□□ 0.29
MRPL35-201ENST00000254644 GOLGA2Q08379 1002 aa16.86■□□□□ 0.29
MRPL35-201ENST00000254644 CCDC27Q2M243 656 aa16.86■□□□□ 0.29
MRPL35-201ENST00000254644 WASHC4Q2M389 1173 aa16.86■□□□□ 0.29
MRPL35-201ENST00000254644 RTL5Q5HYW3 569 aaPredicted RBP16.86■□□□□ 0.29
MRPL35-201ENST00000254644 ZC3H15Q8WU90 426 aaKnown RBP16.86■□□□□ 0.29
MRPL35-201ENST00000254644 PRDM10Q9NQV6 1147 aa16.86■□□□□ 0.29
MRPL35-201ENST00000254644 NSFL1CQ9UNZ2 370 aaKnown RBP16.86■□□□□ 0.29
MRPL35-201ENST00000254644 PCCAP05165 728 aaPredicted RBP16.85■□□□□ 0.29
MRPL35-201ENST00000254644 GPSM2P81274 684 aa16.85■□□□□ 0.29
MRPL35-201ENST00000254644 TSPYL6Q8N831 410 aa16.85■□□□□ 0.29
MRPL35-201ENST00000254644 DPF2Q92785 391 aa16.85■□□□□ 0.29
MRPL35-201ENST00000254644 MYD88Q99836 296 aa16.85■□□□□ 0.29
MRPL35-201ENST00000254644 METTL22Q9BUU2 404 aaPredicted RBP16.85■□□□□ 0.29
MRPL35-201ENST00000254644 CHMP4AQ9BY43 222 aa16.85■□□□□ 0.29
MRPL35-201ENST00000254644 PODXL2Q9NZ53 605 aa16.85■□□□□ 0.29
MRPL35-201ENST00000254644 NCBP3Q53F19 620 aaKnown RBP16.84■□□□□ 0.29
MRPL35-201ENST00000254644 CCDC30Q5VVM6 783 aa16.84■□□□□ 0.29
MRPL35-201ENST00000254644 BCL2L13Q9BXK5 485 aa16.84■□□□□ 0.29
MRPL35-201ENST00000254644 CNOT7Q9UIV1 285 aaKnown RBP16.84■□□□□ 0.29
MRPL35-201ENST00000254644 ABT1Q9ULW3 272 aaKnown RBP16.84■□□□□ 0.29
MRPL35-201ENST00000254644 TLL2Q9Y6L7 1015 aa16.84■□□□□ 0.29
MRPL35-201ENST00000254644 SHTN1A0MZ66 631 aa16.83■□□□□ 0.28
MRPL35-201ENST00000254644 HSP90B1P14625 803 aaKnown RBP16.83■□□□□ 0.28
MRPL35-201ENST00000254644 CTCFP49711 727 aaPredicted RBP16.83■□□□□ 0.28
MRPL35-201ENST00000254644 TBC1D16Q8TBP0 767 aa16.83■□□□□ 0.28
MRPL35-201ENST00000254644 TRPM4Q8TD43 1214 aa16.83■□□□□ 0.28
MRPL35-201ENST00000254644 SEC31BQ9NQW1 1179 aa16.83■□□□□ 0.28
MRPL35-201ENST00000254644 RTL9Q8NET4 1388 aa16.82■□□□□ 0.28
MRPL35-201ENST00000254644 C6orf229H3BNL8 230 aa16.82■□□□□ 0.28
MRPL35-201ENST00000254644 PSMD14O00487 310 aa16.82■□□□□ 0.28
MRPL35-201ENST00000254644 PDE8AO60658 829 aa16.82■□□□□ 0.28
MRPL35-201ENST00000254644 WWC1Q8IX03 1113 aa16.82■□□□□ 0.28
MRPL35-201ENST00000254644 DBNDD1Q9H9R9 158 aa16.82■□□□□ 0.28
MRPL35-201ENST00000254644 CWC25Q9NXE8 425 aaPredicted RBP16.82■□□□□ 0.28
MRPL35-201ENST00000254644 ZBTB12Q9Y330 459 aaPredicted RBP16.82■□□□□ 0.28
MRPL35-201ENST00000254644 SPEF2Q9C093 1822 aa16.82■□□□□ 0.28
MRPL35-201ENST00000254644 DDX58O95786 925 aaKnown RBP16.81■□□□□ 0.28
MRPL35-201ENST00000254644 IGKV5-2P06315 115 aa16.81■□□□□ 0.28
MRPL35-201ENST00000254644 MAP2K1Q02750 393 aaPredicted RBP16.81■□□□□ 0.28
MRPL35-201ENST00000254644 KSR2Q6VAB6 950 aa16.81■□□□□ 0.28
MRPL35-201ENST00000254644 SAPCD2Q86UD0 394 aa16.81■□□□□ 0.28
MRPL35-201ENST00000254644 MICALL2Q8IY33 904 aa16.81■□□□□ 0.28
MRPL35-201ENST00000254644 AIDAQ96BJ3 306 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms