RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 EYA2O00167 538 aa17.49■□□□□ 0.39
UBE4B-201ENST00000253251 MPHOSPH10O00566 681 aaKnown RBP17.49■□□□□ 0.39
UBE4B-201ENST00000253251 RBM8AQ9Y5S9 174 aaKnown RBP17.49■□□□□ 0.39
UBE4B-201ENST00000253251 SETBP1Q9Y6X0 1596 aa17.49■□□□□ 0.39
UBE4B-201ENST00000253251 RNF113AO15541 343 aaKnown RBP17.49■□□□□ 0.39
UBE4B-201ENST00000253251 IARSP41252 1262 aaKnown RBP17.49■□□□□ 0.39
UBE4B-201ENST00000253251 TSHZ3Q63HK5 1081 aa17.49■□□□□ 0.39
UBE4B-201ENST00000253251 PA2G4Q9UQ80 394 aaKnown RBP17.49■□□□□ 0.39
UBE4B-201ENST00000253251 RAB34Q9BZG1 259 aa17.48■□□□□ 0.39
UBE4B-201ENST00000253251 USP16Q9Y5T5 823 aa17.48■□□□□ 0.39
UBE4B-201ENST00000253251 ZSCAN16Q9H4T2 348 aaPredicted RBP17.48■□□□□ 0.39
UBE4B-201ENST00000253251 ABCC4O15439 1325 aa17.48■□□□□ 0.39
UBE4B-201ENST00000253251 PRR36Q9H6K5 1346 aa17.48■□□□□ 0.39
UBE4B-201ENST00000253251 PLCG2P16885 1265 aa17.48■□□□□ 0.39
UBE4B-201ENST00000253251 CYP7A1P22680 504 aa17.48■□□□□ 0.39
UBE4B-201ENST00000253251 TRAPPC3LQ5T215 181 aa17.48■□□□□ 0.39
UBE4B-201ENST00000253251 ESR2Q92731 530 aa17.48■□□□□ 0.39
UBE4B-201ENST00000253251 CCDC87Q9NVE4 849 aa17.48■□□□□ 0.39
UBE4B-201ENST00000253251 STX6O43752 255 aa17.47■□□□□ 0.39
UBE4B-201ENST00000253251 BRPF1P55201 1214 aaPredicted RBP17.47■□□□□ 0.39
UBE4B-201ENST00000253251 TRAF1Q13077 416 aa17.47■□□□□ 0.39
UBE4B-201ENST00000253251 ZNF592Q92610 1267 aa17.47■□□□□ 0.39
UBE4B-201ENST00000253251 PYM1Q9BRP8 204 aaKnown RBP17.47■□□□□ 0.39
UBE4B-201ENST00000253251 GRPEL1Q9HAV7 217 aa17.47■□□□□ 0.39
UBE4B-201ENST00000253251 PDE8AO60658 829 aa17.47■□□□□ 0.39
UBE4B-201ENST00000253251 C8orf34Q49A92 452 aa17.47■□□□□ 0.39
UBE4B-201ENST00000253251 CCDC183Q5T5S1 534 aa17.47■□□□□ 0.39
UBE4B-201ENST00000253251 NAA16Q6N069 864 aaPredicted RBP17.47■□□□□ 0.39
UBE4B-201ENST00000253251 PDILTQ8N807 584 aa17.47■□□□□ 0.39
UBE4B-201ENST00000253251 TRMT2AQ8IZ69 625 aaKnown RBP17.47■□□□□ 0.39
UBE4B-201ENST00000253251 TXLNBQ8N3L3 684 aa17.47■□□□□ 0.39
UBE4B-201ENST00000253251 CARD10Q9BWT7 1032 aa17.47■□□□□ 0.39
UBE4B-201ENST00000253251 AGLP35573 1532 aa17.47■□□□□ 0.39
UBE4B-201ENST00000253251 ZNF76P36508 570 aa17.47■□□□□ 0.39
UBE4B-201ENST00000253251 ZNF622Q969S3 477 aaKnown RBP eCLIP17.47■□□□□ 0.394e-7■■■□□ 17.2
UBE4B-201ENST00000253251 ZNF496Q96IT1 587 aaPredicted RBP17.47■□□□□ 0.39
UBE4B-201ENST00000253251 EPB41L2O43491 1005 aaKnown RBP17.46■□□□□ 0.39
UBE4B-201ENST00000253251 SERPINC1P01008 464 aa17.46■□□□□ 0.39
UBE4B-201ENST00000253251 CCAR2Q8N163 923 aaKnown RBP17.46■□□□□ 0.39
UBE4B-201ENST00000253251 IL17REQ8NFR9 667 aa17.46■□□□□ 0.39
UBE4B-201ENST00000253251 INO80Q9ULG1 1556 aaPredicted RBP17.46■□□□□ 0.39
UBE4B-201ENST00000253251 TSPY2A6NKD2 308 aa17.46■□□□□ 0.39
UBE4B-201ENST00000253251 METAP2P50579 478 aaKnown RBP eCLIP17.46■□□□□ 0.39
UBE4B-201ENST00000253251 TFCP2Q12800 502 aa17.46■□□□□ 0.39
UBE4B-201ENST00000253251 SLC9C2Q5TAH2 1124 aa17.46■□□□□ 0.39
UBE4B-201ENST00000253251 FERMT3Q86UX7 667 aa17.46■□□□□ 0.39
UBE4B-201ENST00000253251 DDX19AQ9NUU7 478 aaKnown RBP17.46■□□□□ 0.39
UBE4B-201ENST00000253251 ZNHIT6Q9NWK9 470 aaKnown RBP17.46■□□□□ 0.39
UBE4B-201ENST00000253251 LAMC1P11047 1609 aa17.46■□□□□ 0.39
UBE4B-201ENST00000253251 GIGYF1O75420 1035 aaPredicted RBP17.46■□□□□ 0.39
UBE4B-201ENST00000253251 GNAQP50148 359 aa17.46■□□□□ 0.39
UBE4B-201ENST00000253251 KAT14Q9H8E8 782 aa17.46■□□□□ 0.39
UBE4B-201ENST00000253251 EHMT1Q9H9B1 1298 aa17.46■□□□□ 0.39
UBE4B-201ENST00000253251 GJB2P29033 226 aa17.45■□□□□ 0.38
UBE4B-201ENST00000253251 TNIP1Q15025 636 aa17.45■□□□□ 0.38
UBE4B-201ENST00000253251 HELLSQ9NRZ9 838 aa17.45■□□□□ 0.38
UBE4B-201ENST00000253251 GCKRQ14397 625 aa17.45■□□□□ 0.38
UBE4B-201ENST00000253251 EYA3Q99504 573 aa17.45■□□□□ 0.38
UBE4B-201ENST00000253251 LUC7LQ9NQ29 371 aaKnown RBP17.45■□□□□ 0.38
UBE4B-201ENST00000253251 ALKQ9UM73 1620 aa17.45■□□□□ 0.38
UBE4B-201ENST00000253251 CABP5Q9NP86 173 aa17.45■□□□□ 0.38
UBE4B-201ENST00000253251 CCNL1Q9UK58 526 aaPredicted RBP17.45■□□□□ 0.38
UBE4B-201ENST00000253251 NMIQ13287 307 aaPredicted RBP17.45■□□□□ 0.38
UBE4B-201ENST00000253251 TMX3Q96JJ7 454 aa17.45■□□□□ 0.38
UBE4B-201ENST00000253251 ORC3Q9UBD5 711 aaPredicted RBP17.45■□□□□ 0.38
UBE4B-201ENST00000253251 CHMLP26374 656 aa17.44■□□□□ 0.38
UBE4B-201ENST00000253251 C16orf71Q8IYS4 520 aaPredicted RBP17.44■□□□□ 0.38
UBE4B-201ENST00000253251 RBM27Q9P2N5 1060 aaKnown RBP17.44■□□□□ 0.38
UBE4B-201ENST00000253251 PARP3Q9Y6F1 533 aa17.44■□□□□ 0.38
UBE4B-201ENST00000253251 GLI2P10070 1586 aa17.44■□□□□ 0.38
UBE4B-201ENST00000253251 CCDC194A0A1B0GVG4 234 aa17.44■□□□□ 0.38
UBE4B-201ENST00000253251 TNPO1Q92973 898 aaKnown RBP17.44■□□□□ 0.38
UBE4B-201ENST00000253251 WTAPQ15007 396 aa17.44■□□□□ 0.38
UBE4B-201ENST00000253251 ANO10Q9NW15 660 aa17.44■□□□□ 0.38
UBE4B-201ENST00000253251 BMP15O95972 392 aa17.44■□□□□ 0.38
UBE4B-201ENST00000253251 SLC4A4Q9Y6R1 1079 aa17.44■□□□□ 0.38
UBE4B-201ENST00000253251 KDM2BQ8NHM5 1336 aa17.44■□□□□ 0.38
UBE4B-201ENST00000253251 GNPATO15228 680 aa17.43■□□□□ 0.38
UBE4B-201ENST00000253251 PPFIBP1Q86W92 1011 aa17.43■□□□□ 0.38
UBE4B-201ENST00000253251 CUL5Q93034 780 aa17.43■□□□□ 0.38
UBE4B-201ENST00000253251 HDAC9Q9UKV0 1011 aa17.43■□□□□ 0.38
UBE4B-201ENST00000253251 CCDC96Q2M329 555 aa17.43■□□□□ 0.38
UBE4B-201ENST00000253251 MADDQ8WXG6 1647 aa17.43■□□□□ 0.38
UBE4B-201ENST00000253251 KDRP35968 1356 aa17.43■□□□□ 0.38
UBE4B-201ENST00000253251 PRIM1P49642 420 aaKnown RBP17.43■□□□□ 0.38
UBE4B-201ENST00000253251 TFCP2L1Q9NZI6 479 aa17.43■□□□□ 0.38
UBE4B-201ENST00000253251 DENND2AQ9ULE3 1009 aa17.43■□□□□ 0.38
UBE4B-201ENST00000253251 MYO1BO43795 1136 aa17.43■□□□□ 0.38
UBE4B-201ENST00000253251 NLRP5P59047 1200 aa17.43■□□□□ 0.38
UBE4B-201ENST00000253251 TMEM266Q2M3C6 531 aa17.43■□□□□ 0.38
UBE4B-201ENST00000253251 NBPF14Q5TI25 921 aa17.43■□□□□ 0.38
UBE4B-201ENST00000253251 MNS1Q8NEH6 495 aa17.43■□□□□ 0.38
UBE4B-201ENST00000253251 DIP2CQ9Y2E4 1556 aa17.42■□□□□ 0.38
UBE4B-201ENST00000253251 CERS3Q8IU89 383 aa17.42■□□□□ 0.38
UBE4B-201ENST00000253251 CAVIN2O95810 425 aa17.42■□□□□ 0.38
UBE4B-201ENST00000253251 SSFA2P28290 1259 aa17.42■□□□□ 0.38
UBE4B-201ENST00000253251 WWC2Q6AWC2 1192 aa17.42■□□□□ 0.38
UBE4B-201ENST00000253251 RBM17Q96I25 401 aaKnown RBP17.42■□□□□ 0.38
UBE4B-201ENST00000253251 CALM1P0DP23 149 aa17.42■□□□□ 0.38
UBE4B-201ENST00000253251 CALM2P0DP24 149 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms