RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 TAF5LO75529 589 aa12.09□□□□□ -0.47
COPB1-201ENST00000249923 TFCP2Q12800 502 aa12.09□□□□□ -0.47
COPB1-201ENST00000249923 CHRNA2Q15822 529 aa12.09□□□□□ -0.47
COPB1-201ENST00000249923 CCDC129Q6ZRS4 1044 aa12.09□□□□□ -0.47
COPB1-201ENST00000249923 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.09□□□□□ -0.472e-6■■□□□ 11.6
COPB1-201ENST00000249923 LAMB4A4D0S4 1761 aa12.09□□□□□ -0.47
COPB1-201ENST00000249923 ATP5J2-PTCD1G3V325 749 aa12.09□□□□□ -0.47
COPB1-201ENST00000249923 PTCD1O75127 700 aaKnown RBP12.09□□□□□ -0.47
COPB1-201ENST00000249923 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.09□□□□□ -0.47
COPB1-201ENST00000249923 TTC6Q86TZ1 520 aa12.09□□□□□ -0.47
COPB1-201ENST00000249923 PODXL2Q9NZ53 605 aa12.09□□□□□ -0.47
COPB1-201ENST00000249923 A0A0G2JLW4 131 aa12.08□□□□□ -0.48
COPB1-201ENST00000249923 RABL6Q3YEC7 729 aaPredicted RBP12.08□□□□□ -0.48
COPB1-201ENST00000249923 LARP1Q6PKG0 1096 aaKnown RBP12.08□□□□□ -0.48
COPB1-201ENST00000249923 FERMT3Q86UX7 667 aa12.08□□□□□ -0.48
COPB1-201ENST00000249923 FSD1Q9BTV5 496 aa12.08□□□□□ -0.48
COPB1-201ENST00000249923 CHMP4AQ9BY43 222 aa12.08□□□□□ -0.48
COPB1-201ENST00000249923 COPRSQ9NQ92 184 aa12.08□□□□□ -0.48
COPB1-201ENST00000249923 DDX58O95786 925 aaKnown RBP12.08□□□□□ -0.48
COPB1-201ENST00000249923 UBE3BQ7Z3V4 1068 aa12.08□□□□□ -0.48
COPB1-201ENST00000249923 GPATCH3Q96I76 525 aa12.08□□□□□ -0.48
COPB1-201ENST00000249923 RPS6KB1P23443 525 aa12.07□□□□□ -0.48
COPB1-201ENST00000249923 TNNI3KQ59H18 835 aa12.07□□□□□ -0.48
COPB1-201ENST00000249923 USPL1Q5W0Q7 1092 aa12.07□□□□□ -0.48
COPB1-201ENST00000249923 ANKRD13DQ6ZTN6 518 aa12.07□□□□□ -0.48
COPB1-201ENST00000249923 FPGT-TNNI3KV9GXZ4 949 aa12.07□□□□□ -0.48
COPB1-201ENST00000249923 ABCC6O95255 1503 aa12.07□□□□□ -0.48
COPB1-201ENST00000249923 VPS37CA5D8V6 355 aaPredicted RBP12.07□□□□□ -0.48
COPB1-201ENST00000249923 NBPF26B4DH59 902 aa12.07□□□□□ -0.48
COPB1-201ENST00000249923 NBPF14Q5TI25 921 aa12.07□□□□□ -0.48
COPB1-201ENST00000249923 NBPF10Q6P3W6 841 aaKnown RBP12.07□□□□□ -0.48
COPB1-201ENST00000249923 NBPF15Q8N660 670 aa12.07□□□□□ -0.48
COPB1-201ENST00000249923 DBNDD2Q9BQY9 259 aa12.07□□□□□ -0.48
COPB1-201ENST00000249923 SH2B1Q9NRF2 756 aaPredicted RBP12.07□□□□□ -0.48
COPB1-201ENST00000249923 UBR2Q8IWV8 1755 aa12.07□□□□□ -0.48
COPB1-201ENST00000249923 CBX1P83916 185 aa12.07□□□□□ -0.48
COPB1-201ENST00000249923 PROSER2Q86WR7 435 aaPredicted RBP12.07□□□□□ -0.48
COPB1-201ENST00000249923 C17orf53Q8N3J3 647 aaPredicted RBP12.07□□□□□ -0.48
COPB1-201ENST00000249923 PARP4Q9UKK3 1724 aaKnown RBP12.07□□□□□ -0.48
COPB1-201ENST00000249923 TPM2P07951 284 aa12.06□□□□□ -0.48
COPB1-201ENST00000249923 RAPGEF4Q8WZA2 1011 aa12.06□□□□□ -0.48
COPB1-201ENST00000249923 SYAP1Q96A49 352 aaPredicted RBP12.06□□□□□ -0.48
COPB1-201ENST00000249923 JAK2O60674 1132 aa12.06□□□□□ -0.48
COPB1-201ENST00000249923 STOX1Q6ZVD7 989 aa12.06□□□□□ -0.48
COPB1-201ENST00000249923 LIG1P18858 919 aa12.06□□□□□ -0.48
COPB1-201ENST00000249923 KIAA2012Q0VF49 1180 aa12.06□□□□□ -0.48
COPB1-201ENST00000249923 TSGA10IPQ3SY00 556 aa12.06□□□□□ -0.48
COPB1-201ENST00000249923 ZSCAN31Q96LW9 406 aaPredicted RBP12.06□□□□□ -0.48
COPB1-201ENST00000249923 C19orf44Q9H6X5 657 aa12.06□□□□□ -0.48
COPB1-201ENST00000249923 ZKSCAN1P17029 563 aaPredicted RBP12.05□□□□□ -0.48
COPB1-201ENST00000249923 ATP5JP18859 108 aa12.05□□□□□ -0.48
COPB1-201ENST00000249923 STK3Q13188 491 aa12.05□□□□□ -0.48
COPB1-201ENST00000249923 CCDC39Q9UFE4 941 aa12.05□□□□□ -0.48
COPB1-201ENST00000249923 CYP21A2P08686 494 aa12.05□□□□□ -0.48
COPB1-201ENST00000249923 FOXO4P98177 505 aa12.05□□□□□ -0.48
COPB1-201ENST00000249923 SPC24Q8NBT2 197 aa12.05□□□□□ -0.48
COPB1-201ENST00000249923 SHANK3Q9BYB0 1731 aa12.05□□□□□ -0.48
COPB1-201ENST00000249923 ADCY5O95622 1261 aa12.05□□□□□ -0.48
COPB1-201ENST00000249923 ATG9AQ7Z3C6 839 aa12.05□□□□□ -0.48
COPB1-201ENST00000249923 DRC7Q8IY82 874 aa12.05□□□□□ -0.48
COPB1-201ENST00000249923 PDCL3Q9H2J4 239 aa12.05□□□□□ -0.48
COPB1-201ENST00000249923 SNRPA1P09661 255 aaKnown RBP12.04□□□□□ -0.48
COPB1-201ENST00000249923 DDX46Q7L014 1031 aaKnown RBP12.04□□□□□ -0.48
COPB1-201ENST00000249923 IFNL2Q8IZJ0 200 aa12.04□□□□□ -0.48
COPB1-201ENST00000249923 ALDH8A1Q9H2A2 487 aaPredicted RBP12.04□□□□□ -0.48
COPB1-201ENST00000249923 TTC12Q9H892 705 aaPredicted RBP12.04□□□□□ -0.48
COPB1-201ENST00000249923 TMEM94Q12767 1356 aa12.04□□□□□ -0.48
COPB1-201ENST00000249923 KCPQ6ZWJ8 1503 aa12.04□□□□□ -0.48
COPB1-201ENST00000249923 TATP17735 454 aaPredicted RBP12.04□□□□□ -0.48
COPB1-201ENST00000249923 LARP1BQ659C4 914 aaKnown RBP12.04□□□□□ -0.48
COPB1-201ENST00000249923 BLOC1S2Q6QNY1 142 aa12.04□□□□□ -0.48
COPB1-201ENST00000249923 PAPPAQ13219 1627 aa12.04□□□□□ -0.48
COPB1-201ENST00000249923 SPDYE4A6NLX3 237 aa12.03□□□□□ -0.48
COPB1-201ENST00000249923 PHF14O94880 888 aa12.03□□□□□ -0.48
COPB1-201ENST00000249923 KCNJ4P48050 445 aa12.03□□□□□ -0.48
COPB1-201ENST00000249923 NEXNQ0ZGT2 675 aa12.03□□□□□ -0.48
COPB1-201ENST00000249923 DCAF5Q96JK2 942 aa12.03□□□□□ -0.48
COPB1-201ENST00000249923 LRRC2Q9BYS8 371 aa12.03□□□□□ -0.48
COPB1-201ENST00000249923 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.03□□□□□ -0.483e-7■■■□□ 14.9
COPB1-201ENST00000249923 A0A087WZG4 1122 aa12.03□□□□□ -0.48
COPB1-201ENST00000249923 HIP1O00291 1037 aa12.03□□□□□ -0.48
COPB1-201ENST00000249923 TTLL7Q6ZT98 887 aa12.03□□□□□ -0.48
COPB1-201ENST00000249923 CCDC9Q9Y3X0 531 aaKnown RBP12.03□□□□□ -0.48
COPB1-201ENST00000249923 MYH15Q9Y2K3 1946 aa12.03□□□□□ -0.48
COPB1-201ENST00000249923 NWD2Q9ULI1 1742 aa12.03□□□□□ -0.48
COPB1-201ENST00000249923 MCM5P33992 734 aa12.03□□□□□ -0.48
COPB1-201ENST00000249923 HAUS7Q99871 368 aa12.03□□□□□ -0.48
COPB1-201ENST00000249923 KCNF1Q9H3M0 494 aa12.03□□□□□ -0.48
COPB1-201ENST00000249923 FAM184AQ8NB25 1140 aa12.02□□□□□ -0.48
COPB1-201ENST00000249923 DDX11Q96FC9 970 aa12.02□□□□□ -0.48
COPB1-201ENST00000249923 DNAJC2Q99543 621 aaKnown RBP12.02□□□□□ -0.48
COPB1-201ENST00000249923 TFIP11Q9UBB9 837 aaKnown RBP12.02□□□□□ -0.48
COPB1-201ENST00000249923 XIRP1Q702N8 1843 aaKnown RBP12.02□□□□□ -0.48
COPB1-201ENST00000249923 KDM4AO75164 1064 aa12.02□□□□□ -0.49
COPB1-201ENST00000249923 CAMK4Q16566 473 aa12.02□□□□□ -0.49
COPB1-201ENST00000249923 LMBR1LQ6UX01 489 aa12.02□□□□□ -0.49
COPB1-201ENST00000249923 PGBD1Q96JS3 809 aa12.02□□□□□ -0.49
COPB1-201ENST00000249923 TNS3Q68CZ2 1445 aa12.02□□□□□ -0.49
COPB1-201ENST00000249923 UVSSAQ2YD98 709 aa12.02□□□□□ -0.49
COPB1-201ENST00000249923 GTF3C6Q969F1 213 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms