RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 ITGB4P16144 1822 aa26.03■■□□□ 1.76
CLN6-201ENST00000249806 VSIG10Q8N0Z9 540 aa26.02■■□□□ 1.76
CLN6-201ENST00000249806 ISY1Q9ULR0 285 aaKnown RBP26.02■■□□□ 1.76
CLN6-201ENST00000249806 TAF6LQ9Y6J9 622 aa26.02■■□□□ 1.76
CLN6-201ENST00000249806 DTNBO60941 627 aa26.02■■□□□ 1.76
CLN6-201ENST00000249806 FOXD4L6Q3SYB3 417 aaPredicted RBP26.02■■□□□ 1.76
CLN6-201ENST00000249806 FOXD4L3Q6VB84 417 aaPredicted RBP26.02■■□□□ 1.76
CLN6-201ENST00000249806 DDX46Q7L014 1031 aaKnown RBP26.02■■□□□ 1.76
CLN6-201ENST00000249806 TEX13AQ9BXU3 409 aaPredicted RBP26.02■■□□□ 1.76
CLN6-201ENST00000249806 PUS3Q9BZE2 481 aaKnown RBP26.01■■□□□ 1.75
CLN6-201ENST00000249806 EYA2O00167 538 aa26■■□□□ 1.75
CLN6-201ENST00000249806 TAF5LO75529 589 aa26■■□□□ 1.75
CLN6-201ENST00000249806 STARD3NLO95772 234 aa26■■□□□ 1.75
CLN6-201ENST00000249806 IL15P40933 162 aaPredicted RBP26■■□□□ 1.75
CLN6-201ENST00000249806 SEC62Q99442 399 aaKnown RBP26■■□□□ 1.75
CLN6-201ENST00000249806 FAM89AQ96GI7 184 aa26■■□□□ 1.75
CLN6-201ENST00000249806 RPAP1Q9BWH6 1393 aaPredicted RBP25.99■■□□□ 1.75
CLN6-201ENST00000249806 SLC4A9Q96Q91 983 aa25.99■■□□□ 1.75
CLN6-201ENST00000249806 DISP2A7MBM2 1401 aa25.99■■□□□ 1.75
CLN6-201ENST00000249806 KIF6Q6ZMV9 814 aa25.99■■□□□ 1.75
CLN6-201ENST00000249806 SYTL4Q96C24 671 aaPredicted RBP25.99■■□□□ 1.75
CLN6-201ENST00000249806 CCDC85AQ96PX6 553 aaPredicted RBP25.99■■□□□ 1.75
CLN6-201ENST00000249806 CCDC129Q6ZRS4 1044 aa25.98■■□□□ 1.75
CLN6-201ENST00000249806 CCDC83Q8IWF9 413 aa25.98■■□□□ 1.75
CLN6-201ENST00000249806 NSFL1CQ9UNZ2 370 aaKnown RBP25.98■■□□□ 1.75
CLN6-201ENST00000249806 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.98■■□□□ 1.75
CLN6-201ENST00000249806 WDR33Q9C0J8 1336 aaKnown RBP25.98■■□□□ 1.75
CLN6-201ENST00000249806 ROBO1Q9Y6N7 1651 aa25.97■■□□□ 1.75
CLN6-201ENST00000249806 EXOC5O00471 708 aa25.97■■□□□ 1.75
CLN6-201ENST00000249806 RNF20Q5VTR2 975 aa25.97■■□□□ 1.75
CLN6-201ENST00000249806 ZNF609O15014 1411 aa25.97■■□□□ 1.75
CLN6-201ENST00000249806 COL14A1Q05707 1796 aaKnown RBP25.97■■□□□ 1.75
CLN6-201ENST00000249806 TRIM28Q13263 835 aaKnown RBP25.96■■□□□ 1.75
CLN6-201ENST00000249806 HLFQ16534 295 aa25.96■■□□□ 1.75
CLN6-201ENST00000249806 SYNE4Q8N205 404 aa25.96■■□□□ 1.75
CLN6-201ENST00000249806 TCEANC2Q96MN5 208 aa25.96■■□□□ 1.75
CLN6-201ENST00000249806 GPR108Q9NPR9 543 aa25.96■■□□□ 1.75
CLN6-201ENST00000249806 RBM27Q9P2N5 1060 aaKnown RBP25.96■■□□□ 1.75
CLN6-201ENST00000249806 JCADQ9P266 1359 aa25.96■■□□□ 1.75
CLN6-201ENST00000249806 BCL9O00512 1426 aa25.96■■□□□ 1.75
CLN6-201ENST00000249806 ME3Q16798 604 aa25.96■■□□□ 1.75
CLN6-201ENST00000249806 ZSCAN23Q3MJ62 389 aa25.96■■□□□ 1.75
CLN6-201ENST00000249806 SLFNL1Q499Z3 407 aa25.96■■□□□ 1.75
CLN6-201ENST00000249806 SMC3Q9UQE7 1217 aa25.96■■□□□ 1.75
CLN6-201ENST00000249806 GOLIM4O00461 696 aa25.95■■□□□ 1.75
CLN6-201ENST00000249806 PSMA5P28066 241 aa25.95■■□□□ 1.75
CLN6-201ENST00000249806 CCDC57Q2TAC2 916 aa25.95■■□□□ 1.75
CLN6-201ENST00000249806 TCHHQ07283 1943 aa25.95■■□□□ 1.74
CLN6-201ENST00000249806 A0A1B0GUL7 405 aa25.95■■□□□ 1.74
CLN6-201ENST00000249806 SYT1P21579 422 aa25.95■■□□□ 1.74
CLN6-201ENST00000249806 KBTBD3Q8NAB2 608 aa25.95■■□□□ 1.74
CLN6-201ENST00000249806 TPCN1Q9ULQ1 816 aa25.95■■□□□ 1.74
CLN6-201ENST00000249806 CIAO1O76071 339 aa25.94■■□□□ 1.74
CLN6-201ENST00000249806 GPTP24298 496 aa25.94■■□□□ 1.74
CLN6-201ENST00000249806 ST3GAL1Q11201 340 aa25.94■■□□□ 1.74
CLN6-201ENST00000249806 NECAB1Q8N987 351 aa25.94■■□□□ 1.74
CLN6-201ENST00000249806 GDPD2Q9HCC8 539 aa25.94■■□□□ 1.74
CLN6-201ENST00000249806 MAP3K15Q6ZN16 1313 aa25.94■■□□□ 1.74
CLN6-201ENST00000249806 PCCAP05165 728 aaPredicted RBP25.94■■□□□ 1.74
CLN6-201ENST00000249806 CYP19A1P11511 503 aaPredicted RBP25.94■■□□□ 1.74
CLN6-201ENST00000249806 MCMDC2Q4G0Z9 681 aa25.94■■□□□ 1.74
CLN6-201ENST00000249806 USPL1Q5W0Q7 1092 aa25.94■■□□□ 1.74
CLN6-201ENST00000249806 GIGYF2Q6Y7W6 1299 aaKnown RBP25.94■■□□□ 1.74
CLN6-201ENST00000249806 ZSCAN31Q96LW9 406 aaPredicted RBP25.94■■□□□ 1.74
CLN6-201ENST00000249806 PAG1Q9NWQ8 432 aa25.94■■□□□ 1.74
CLN6-201ENST00000249806 BLOC1S2Q6QNY1 142 aa25.93■■□□□ 1.74
CLN6-201ENST00000249806 ZBTB38Q8NAP3 1195 aaPredicted RBP25.93■■□□□ 1.74
CLN6-201ENST00000249806 SH2B1Q9NRF2 756 aaPredicted RBP25.93■■□□□ 1.74
CLN6-201ENST00000249806 COL16A1Q07092 1604 aaPredicted RBP25.92■■□□□ 1.74
CLN6-201ENST00000249806 STX6O43752 255 aa25.92■■□□□ 1.74
CLN6-201ENST00000249806 GJB2P29033 226 aa25.92■■□□□ 1.74
CLN6-201ENST00000249806 PRIM1P49642 420 aaKnown RBP25.92■■□□□ 1.74
CLN6-201ENST00000249806 CEP126Q9P2H0 1117 aa25.92■■□□□ 1.74
CLN6-201ENST00000249806 ZBTB1Q9Y2K1 713 aa25.92■■□□□ 1.74
CLN6-201ENST00000249806 RFX7Q2KHR2 1363 aa25.91■■□□□ 1.74
CLN6-201ENST00000249806 ZNF445P59923 1031 aa25.91■■□□□ 1.74
CLN6-201ENST00000249806 HMG20BQ9P0W2 317 aa25.91■■□□□ 1.74
CLN6-201ENST00000249806 TMEM63CQ9P1W3 806 aa25.91■■□□□ 1.74
CLN6-201ENST00000249806 ZSCAN22P10073 491 aaPredicted RBP25.91■■□□□ 1.74
CLN6-201ENST00000249806 RPS6KB1P23443 525 aa25.91■■□□□ 1.74
CLN6-201ENST00000249806 TSGA10IPQ3SY00 556 aa25.91■■□□□ 1.74
CLN6-201ENST00000249806 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.9■■□□□ 1.74
CLN6-201ENST00000249806 ADAMTS2O95450 1211 aa25.9■■□□□ 1.74
CLN6-201ENST00000249806 IFIT1P09914 478 aaKnown RBP25.9■■□□□ 1.74
CLN6-201ENST00000249806 CSF1RP07333 972 aa25.89■■□□□ 1.74
CLN6-201ENST00000249806 NLRP10Q86W26 655 aa25.89■■□□□ 1.74
CLN6-201ENST00000249806 PLA2G12BQ9BX93 195 aa25.88■■□□□ 1.73
CLN6-201ENST00000249806 TOB2Q14106 344 aaPredicted RBP25.88■■□□□ 1.73
CLN6-201ENST00000249806 USP48Q86UV5 1035 aa25.88■■□□□ 1.73
CLN6-201ENST00000249806 PALLDQ8WX93 1383 aa25.88■■□□□ 1.73
CLN6-201ENST00000249806 GADD45BO75293 160 aaPredicted RBP25.87■■□□□ 1.73
CLN6-201ENST00000249806 ADORA1P30542 326 aa25.87■■□□□ 1.73
CLN6-201ENST00000249806 IFIT5Q13325 482 aaKnown RBP25.87■■□□□ 1.73
CLN6-201ENST00000249806 TAF7LQ5H9L4 462 aa25.87■■□□□ 1.73
CLN6-201ENST00000249806 CYP21A2P08686 494 aa25.87■■□□□ 1.73
CLN6-201ENST00000249806 SH3TC1Q8TE82 1336 aa25.87■■□□□ 1.73
CLN6-201ENST00000249806 TBC1D2BQ9UPU7 963 aa25.86■■□□□ 1.73
CLN6-201ENST00000249806 U3KPZ7 1027 aaPredicted RBP25.86■■□□□ 1.73
CLN6-201ENST00000249806 AHDC1Q5TGY3 1603 aaPredicted RBP25.86■■□□□ 1.73
CLN6-201ENST00000249806 MBD3O95983 291 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms