RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 TYRO3Q06418 890 aa22.86■■□□□ 1.25
SOX4-201ENST00000244745 TTF1Q15361 905 aaPredicted RBP22.86■■□□□ 1.25
SOX4-201ENST00000244745 CCDC178Q5BJE1 867 aa22.86■■□□□ 1.25
SOX4-201ENST00000244745 MTHFSDQ2M296 383 aaKnown RBP22.85■■□□□ 1.25
SOX4-201ENST00000244745 GOLGA6L9A6NEM1 432 aa22.85■■□□□ 1.25
SOX4-201ENST00000244745 CTR9Q6PD62 1173 aa22.85■■□□□ 1.25
SOX4-201ENST00000244745 ANKRD24Q8TF21 1146 aa22.85■■□□□ 1.25
SOX4-201ENST00000244745 TEX14Q8IWB6 1497 aa22.85■■□□□ 1.25
SOX4-201ENST00000244745 ZBTB7BO15156 539 aaPredicted RBP22.85■■□□□ 1.25
SOX4-201ENST00000244745 HSP90AA4PQ58FG1 418 aa22.85■■□□□ 1.25
SOX4-201ENST00000244745 MICALCLQ6ZW33 695 aa22.85■■□□□ 1.25
SOX4-201ENST00000244745 A0A1W2PP64 1363 aa22.85■■□□□ 1.25
SOX4-201ENST00000244745 UHRF1BP1Q6BDS2 1440 aa22.84■■□□□ 1.25
SOX4-201ENST00000244745 IGSF3O75054 1194 aa22.84■■□□□ 1.25
SOX4-201ENST00000244745 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.84■■□□□ 1.25
SOX4-201ENST00000244745 V9GYY5 206 aaPredicted RBP22.84■■□□□ 1.25
SOX4-201ENST00000244745 ABCC1P33527 1531 aa22.84■■□□□ 1.25
SOX4-201ENST00000244745 CCDC194A0A1B0GVG4 234 aa22.84■■□□□ 1.25
SOX4-201ENST00000244745 ANKRD62A6NC57 917 aa22.84■■□□□ 1.25
SOX4-201ENST00000244745 USO1O60763 962 aaKnown RBP22.84■■□□□ 1.25
SOX4-201ENST00000244745 CHMLP26374 656 aa22.84■■□□□ 1.25
SOX4-201ENST00000244745 DZIP1Q86YF9 867 aaKnown RBP22.84■■□□□ 1.25
SOX4-201ENST00000244745 MRPS27Q92552 414 aaKnown RBP22.84■■□□□ 1.25
SOX4-201ENST00000244745 MCMDC2Q4G0Z9 681 aa22.84■■□□□ 1.25
SOX4-201ENST00000244745 CEBPAP49715 358 aaPredicted RBP22.83■■□□□ 1.25
SOX4-201ENST00000244745 IPO4Q8TEX9 1081 aaKnown RBP22.83■■□□□ 1.25
SOX4-201ENST00000244745 RNF123Q5XPI4 1314 aa22.83■■□□□ 1.25
SOX4-201ENST00000244745 GTF2A1P52655 376 aaPredicted RBP22.83■■□□□ 1.25
SOX4-201ENST00000244745 RBSNQ9H1K0 784 aa22.83■■□□□ 1.25
SOX4-201ENST00000244745 MTIF2P46199 727 aaKnown RBP22.83■■□□□ 1.25
SOX4-201ENST00000244745 MFSD6Q6ZSS7 791 aa22.83■■□□□ 1.25
SOX4-201ENST00000244745 DMRT2Q9Y5R5 561 aa22.83■■□□□ 1.25
SOX4-201ENST00000244745 BLMP54132 1417 aaPredicted RBP22.83■■□□□ 1.24
SOX4-201ENST00000244745 SHANK2Q9UPX8 1470 aa22.83■■□□□ 1.24
SOX4-201ENST00000244745 PTGS1P23219 599 aa22.83■■□□□ 1.24
SOX4-201ENST00000244745 RBM25P49756 843 aaKnown RBP22.83■■□□□ 1.24
SOX4-201ENST00000244745 ANKRD13DQ6ZTN6 518 aa22.83■■□□□ 1.24
SOX4-201ENST00000244745 LDHAL6AQ6ZMR3 332 aa22.82■■□□□ 1.24
SOX4-201ENST00000244745 INCENPQ9NQS7 918 aa22.82■■□□□ 1.24
SOX4-201ENST00000244745 TDRD12Q587J7 1177 aaKnown RBP22.82■■□□□ 1.24
SOX4-201ENST00000244745 LUZP1Q86V48 1076 aa22.82■■□□□ 1.24
SOX4-201ENST00000244745 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.82■■□□□ 1.24
SOX4-201ENST00000244745 TICAM2Q86XR7 235 aa22.82■■□□□ 1.24
SOX4-201ENST00000244745 IFNL2Q8IZJ0 200 aa22.82■■□□□ 1.24
SOX4-201ENST00000244745 ZNF287Q9HBT7 754 aa22.82■■□□□ 1.24
SOX4-201ENST00000244745 TRAPPC8Q9Y2L5 1435 aa22.82■■□□□ 1.24
SOX4-201ENST00000244745 LIG1P18858 919 aa22.82■■□□□ 1.24
SOX4-201ENST00000244745 A2MP01023 1474 aa22.82■■□□□ 1.24
SOX4-201ENST00000244745 ZNF652Q9Y2D9 606 aa22.82■■□□□ 1.24
SOX4-201ENST00000244745 KANK3Q6NY19 840 aa22.81■■□□□ 1.24
SOX4-201ENST00000244745 KCNG4Q8TDN1 519 aa22.81■■□□□ 1.24
SOX4-201ENST00000244745 ALG1Q9BT22 464 aa22.81■■□□□ 1.24
SOX4-201ENST00000244745 UBA5Q9GZZ9 404 aa22.81■■□□□ 1.24
SOX4-201ENST00000244745 GRM8O00222 908 aa22.81■■□□□ 1.24
SOX4-201ENST00000244745 CREB3L3Q68CJ9 461 aa22.81■■□□□ 1.24
SOX4-201ENST00000244745 XAGE3Q8WTP9 111 aa22.81■■□□□ 1.24
SOX4-201ENST00000244745 DNAI1Q9UI46 699 aa22.81■■□□□ 1.24
SOX4-201ENST00000244745 ZNF444Q8N0Y2 327 aaPredicted RBP22.81■■□□□ 1.24
SOX4-201ENST00000244745 OTUD7AQ8TE49 926 aaPredicted RBP22.81■■□□□ 1.24
SOX4-201ENST00000244745 SNRPA1P09661 255 aaKnown RBP22.8■■□□□ 1.24
SOX4-201ENST00000244745 MARCKSP29966 332 aaPredicted RBP22.8■■□□□ 1.24
SOX4-201ENST00000244745 ZFYVE9O95405 1425 aa22.8■■□□□ 1.24
SOX4-201ENST00000244745 PAFAH1B1P43034 410 aa22.8■■□□□ 1.24
SOX4-201ENST00000244745 RTL1A6NKG5 1358 aa22.8■■□□□ 1.24
SOX4-201ENST00000244745 FGFR1OPO95684 399 aaKnown RBP22.8■■□□□ 1.24
SOX4-201ENST00000244745 RUFY3Q7L099 469 aa22.8■■□□□ 1.24
SOX4-201ENST00000244745 BCCIPQ9P287 314 aaKnown RBP eCLIP22.8■■□□□ 1.24
SOX4-201ENST00000244745 TTC41PQ6P2S7 1318 aa22.8■■□□□ 1.24
SOX4-201ENST00000244745 KRI1Q8N9T8 703 aaKnown RBP22.8■■□□□ 1.24
SOX4-201ENST00000244745 INTS4Q96HW7 963 aaKnown RBP22.8■■□□□ 1.24
SOX4-201ENST00000244745 SSR1P43307 286 aaKnown RBP22.79■■□□□ 1.24
SOX4-201ENST00000244745 CCDC113Q9H0I3 377 aa22.79■■□□□ 1.24
SOX4-201ENST00000244745 OGFRQ9NZT2 677 aa22.79■■□□□ 1.24
SOX4-201ENST00000244745 TMEM266Q2M3C6 531 aa22.79■■□□□ 1.24
SOX4-201ENST00000244745 SLC4A8Q2Y0W8 1093 aa22.79■■□□□ 1.24
SOX4-201ENST00000244745 GOPCQ9HD26 462 aa22.79■■□□□ 1.24
SOX4-201ENST00000244745 PPP1R12BO60237 982 aaPredicted RBP22.79■■□□□ 1.24
SOX4-201ENST00000244745 ALDH1L1O75891 902 aa22.79■■□□□ 1.24
SOX4-201ENST00000244745 AFMP43652 599 aa22.79■■□□□ 1.24
SOX4-201ENST00000244745 TTC21AQ8NDW8 1320 aa22.78■■□□□ 1.24
SOX4-201ENST00000244745 SLU7O95391 586 aaKnown RBP22.78■■□□□ 1.24
SOX4-201ENST00000244745 MAP2K1Q02750 393 aaPredicted RBP22.78■■□□□ 1.24
SOX4-201ENST00000244745 KSR2Q6VAB6 950 aa22.78■■□□□ 1.24
SOX4-201ENST00000244745 KRT28Q7Z3Y7 464 aa22.78■■□□□ 1.24
SOX4-201ENST00000244745 ANKIB1Q9P2G1 1089 aa22.78■■□□□ 1.24
SOX4-201ENST00000244745 ALS2CR12Q96Q35 445 aa22.78■■□□□ 1.24
SOX4-201ENST00000244745 CPA1P15085 419 aa22.77■■□□□ 1.24
SOX4-201ENST00000244745 SYT1P21579 422 aa22.77■■□□□ 1.24
SOX4-201ENST00000244745 MATR3P43243 847 aaKnown RBP eCLIP22.77■■□□□ 1.24
SOX4-201ENST00000244745 COPS6Q7L5N1 327 aa22.77■■□□□ 1.24
SOX4-201ENST00000244745 ADAMTS12P58397 1594 aa22.77■■□□□ 1.24
SOX4-201ENST00000244745 CNKSR2Q8WXI2 1034 aa22.77■■□□□ 1.24
SOX4-201ENST00000244745 SLC39A6Q13433 755 aa22.77■■□□□ 1.24
SOX4-201ENST00000244745 CHST3Q7LGC8 479 aa22.77■■□□□ 1.24
SOX4-201ENST00000244745 DYDC1Q8WWB3 177 aa22.77■■□□□ 1.23
SOX4-201ENST00000244745 ZBTB43O43298 467 aa22.76■■□□□ 1.23
SOX4-201ENST00000244745 APOBRQ0VD83 1088 aa22.76■■□□□ 1.23
SOX4-201ENST00000244745 N4BP3O15049 544 aa22.76■■□□□ 1.23
SOX4-201ENST00000244745 IFFO1Q0D2I5 559 aa22.76■■□□□ 1.23
SOX4-201ENST00000244745 JADE2Q9NQC1 790 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms