RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 GREM2Q9H772 168 aa25.2■■□□□ 1.62
SNRPA-201ENST00000243563 DLEC1Q9Y238 1755 aa25.2■■□□□ 1.62
SNRPA-201ENST00000243563 ATP8B2P98198 1209 aa25.19■■□□□ 1.62
SNRPA-201ENST00000243563 MTX1Q13505 466 aa25.19■■□□□ 1.62
SNRPA-201ENST00000243563 GTF3C3Q9Y5Q9 886 aa25.19■■□□□ 1.62
SNRPA-201ENST00000243563 SEC31BQ9NQW1 1179 aa25.19■■□□□ 1.62
SNRPA-201ENST00000243563 CHMP3Q9Y3E7 222 aa25.19■■□□□ 1.62
SNRPA-201ENST00000243563 POLD1P28340 1107 aa25.18■■□□□ 1.62
SNRPA-201ENST00000243563 RFX5P48382 616 aaPredicted RBP25.18■■□□□ 1.62
SNRPA-201ENST00000243563 SF3B3Q15393 1217 aaKnown RBP25.18■■□□□ 1.62
SNRPA-201ENST00000243563 KLHDC4Q8TBB5 520 aa25.18■■□□□ 1.62
SNRPA-201ENST00000243563 SRGAP3O43295 1099 aa25.17■■□□□ 1.62
SNRPA-201ENST00000243563 AAMPQ13685 434 aa25.17■■□□□ 1.62
SNRPA-201ENST00000243563 NLRP3Q96P20 1036 aa25.17■■□□□ 1.62
SNRPA-201ENST00000243563 BRIP1Q9BX63 1249 aa25.17■■□□□ 1.62
SNRPA-201ENST00000243563 LRP5O75197 1615 aa25.17■■□□□ 1.62
SNRPA-201ENST00000243563 KLRG2A4D1S0 409 aaPredicted RBP25.16■■□□□ 1.62
SNRPA-201ENST00000243563 IGHDP01880 384 aa25.16■■□□□ 1.62
SNRPA-201ENST00000243563 POLA2Q14181 598 aa25.16■■□□□ 1.62
SNRPA-201ENST00000243563 RPAP2Q8IXW5 612 aaPredicted RBP25.16■■□□□ 1.62
SNRPA-201ENST00000243563 SSH3Q8TE77 659 aa25.16■■□□□ 1.62
SNRPA-201ENST00000243563 SPON1Q9HCB6 807 aa25.16■■□□□ 1.62
SNRPA-201ENST00000243563 CRY2Q49AN0 593 aa25.15■■□□□ 1.62
SNRPA-201ENST00000243563 SLC51AQ86UW1 340 aa25.15■■□□□ 1.62
SNRPA-201ENST00000243563 ZNF594Q96JF6 807 aaPredicted RBP25.15■■□□□ 1.62
SNRPA-201ENST00000243563 PA2G4Q9UQ80 394 aaKnown RBP25.15■■□□□ 1.62
SNRPA-201ENST00000243563 HDAC5Q9UQL6 1122 aa25.15■■□□□ 1.62
SNRPA-201ENST00000243563 A0A1B0GUL6 1792 aa25.14■■□□□ 1.62
SNRPA-201ENST00000243563 ITGA6P23229 1130 aa25.14■■□□□ 1.61
SNRPA-201ENST00000243563 CHRNA5P30532 468 aa25.14■■□□□ 1.61
SNRPA-201ENST00000243563 RTL9Q8NET4 1388 aa25.14■■□□□ 1.61
SNRPA-201ENST00000243563 CCDC152Q4G0S7 254 aa25.13■■□□□ 1.61
SNRPA-201ENST00000243563 ERICH6BQ5W0A0 696 aa25.13■■□□□ 1.61
SNRPA-201ENST00000243563 BRCA1P38398 1863 aaKnown RBP25.13■■□□□ 1.61
SNRPA-201ENST00000243563 B4GALNT3Q6L9W6 998 aa25.12■■□□□ 1.61
SNRPA-201ENST00000243563 HSP90B1P14625 803 aaKnown RBP25.12■■□□□ 1.61
SNRPA-201ENST00000243563 PTPN12Q05209 780 aaKnown RBP25.12■■□□□ 1.61
SNRPA-201ENST00000243563 SRGNP10124 158 aa25.11■■□□□ 1.61
SNRPA-201ENST00000243563 CELF1Q92879 486 aaKnown RBP25.11■■□□□ 1.61
SNRPA-201ENST00000243563 SLX4Q8IY92 1834 aa25.1■■□□□ 1.61
SNRPA-201ENST00000243563 PDE6BP35913 854 aa25.1■■□□□ 1.61
SNRPA-201ENST00000243563 HDAC1Q13547 482 aaPredicted RBP25.1■■□□□ 1.61
SNRPA-201ENST00000243563 C2CD5Q86YS7 1000 aa25.1■■□□□ 1.61
SNRPA-201ENST00000243563 PPP4R2Q9NY27 417 aa25.1■■□□□ 1.61
SNRPA-201ENST00000243563 IFIT5Q13325 482 aaKnown RBP25.09■■□□□ 1.61
SNRPA-201ENST00000243563 PUS3Q9BZE2 481 aaKnown RBP25.09■■□□□ 1.61
SNRPA-201ENST00000243563 CCDC57Q2TAC2 916 aa25.08■■□□□ 1.61
SNRPA-201ENST00000243563 KLHL34Q8N239 644 aa25.08■■□□□ 1.61
SNRPA-201ENST00000243563 SIL1Q9H173 461 aa25.08■■□□□ 1.61
SNRPA-201ENST00000243563 PPP1R1BQ9UD71 204 aaPredicted RBP25.08■■□□□ 1.61
SNRPA-201ENST00000243563 ANKRD18BA2A2Z9 1011 aa25.08■■□□□ 1.6
SNRPA-201ENST00000243563 RPGRQ92834 1020 aaKnown RBP25.08■■□□□ 1.6
SNRPA-201ENST00000243563 EXOC6BQ9Y2D4 811 aa25.08■■□□□ 1.6
SNRPA-201ENST00000243563 LRRC37AA6NMS7 1700 aa25.07■■□□□ 1.6
SNRPA-201ENST00000243563 A0A0G2JLW4 131 aa25.07■■□□□ 1.6
SNRPA-201ENST00000243563 DPEP1P16444 411 aa25.07■■□□□ 1.6
SNRPA-201ENST00000243563 KCNA3P22001 575 aa25.07■■□□□ 1.6
SNRPA-201ENST00000243563 HOXA10P31260 410 aaPredicted RBP25.07■■□□□ 1.6
SNRPA-201ENST00000243563 LRRC24Q50LG9 513 aa25.07■■□□□ 1.6
SNRPA-201ENST00000243563 COPRSQ9NQ92 184 aa25.07■■□□□ 1.6
SNRPA-201ENST00000243563 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.06■■□□□ 1.6
SNRPA-201ENST00000243563 HMMRO75330 724 aa25.05■■□□□ 1.6
SNRPA-201ENST00000243563 DDX46Q7L014 1031 aaKnown RBP25.05■■□□□ 1.6
SNRPA-201ENST00000243563 NLGN2Q8NFZ4 835 aa25.05■■□□□ 1.6
SNRPA-201ENST00000243563 CCDC136Q96JN2 1154 aa25.05■■□□□ 1.6
SNRPA-201ENST00000243563 KDM2BQ8NHM5 1336 aa25.05■■□□□ 1.6
SNRPA-201ENST00000243563 NPR1P16066 1061 aa25.04■■□□□ 1.6
SNRPA-201ENST00000243563 ATG9AQ7Z3C6 839 aa25.04■■□□□ 1.6
SNRPA-201ENST00000243563 DCTPP1Q9H773 170 aa25.04■■□□□ 1.6
SNRPA-201ENST00000243563 H0YIN7 160 aa25.04■■□□□ 1.6
SNRPA-201ENST00000243563 SURF6O75683 361 aaKnown RBP25.04■■□□□ 1.6
SNRPA-201ENST00000243563 GRAPQ13588 217 aa25.04■■□□□ 1.6
SNRPA-201ENST00000243563 GRAPLQ8TC17 118 aaPredicted RBP25.04■■□□□ 1.6
SNRPA-201ENST00000243563 MASTLQ96GX5 879 aa25.04■■□□□ 1.6
SNRPA-201ENST00000243563 RBM17Q96I25 401 aaKnown RBP25.04■■□□□ 1.6
SNRPA-201ENST00000243563 RWDD1Q9H446 243 aaPredicted RBP25.04■■□□□ 1.6
SNRPA-201ENST00000243563 ZNF622Q969S3 477 aaKnown RBP eCLIP25.03■■□□□ 1.67e-14■■□□□ 13.7
SNRPA-201ENST00000243563 CRAMP1Q96RY5 1269 aa25.03■■□□□ 1.6
SNRPA-201ENST00000243563 NOP58Q9Y2X3 529 aaKnown RBP25.03■■□□□ 1.6
SNRPA-201ENST00000243563 CD2APQ9Y5K6 639 aa25.03■■□□□ 1.6
SNRPA-201ENST00000243563 FHDC1Q9C0D6 1143 aaPredicted RBP25.02■■□□□ 1.6
SNRPA-201ENST00000243563 WWC3Q9ULE0 1092 aa25.02■■□□□ 1.6
SNRPA-201ENST00000243563 APBB1O00213 710 aa25.01■■□□□ 1.59
SNRPA-201ENST00000243563 RPS8P62241 208 aaKnown RBP25.01■■□□□ 1.59
SNRPA-201ENST00000243563 TAF7LQ5H9L4 462 aa25.01■■□□□ 1.59
SNRPA-201ENST00000243563 STYK1Q6J9G0 422 aa25.01■■□□□ 1.59
SNRPA-201ENST00000243563 ANKRD18AQ8IVF6 992 aa25.01■■□□□ 1.59
SNRPA-201ENST00000243563 CDC5LQ99459 802 aaKnown RBP25.01■■□□□ 1.59
SNRPA-201ENST00000243563 SRCAPQ6ZRS2 3230 aa25.01■■□□□ 1.59
SNRPA-201ENST00000243563 LTBP1Q14766 1721 aa25.01■■□□□ 1.59
SNRPA-201ENST00000243563 EYA2O00167 538 aa25.01■■□□□ 1.59
SNRPA-201ENST00000243563 SASH1O94885 1247 aa25.01■■□□□ 1.59
SNRPA-201ENST00000243563 OLFM4Q6UX06 510 aa25.01■■□□□ 1.59
SNRPA-201ENST00000243563 RIPOR2Q9Y4F9 1068 aa25.01■■□□□ 1.59
SNRPA-201ENST00000243563 TGFB2P61812 414 aa25■■□□□ 1.59
SNRPA-201ENST00000243563 LDHAL6AQ6ZMR3 332 aa25■■□□□ 1.59
SNRPA-201ENST00000243563 SMC5Q8IY18 1101 aa25■■□□□ 1.59
SNRPA-201ENST00000243563 IGHMBP2P38935 993 aaKnown RBP24.98■■□□□ 1.59
SNRPA-201ENST00000243563 SMARCA5O60264 1052 aaPredicted RBP24.97■■□□□ 1.59
SNRPA-201ENST00000243563 PRPF40BQ6NWY9 871 aaKnown RBP24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms