RNA–Protein interactions for RNA: ENST00000243103.3

HOXC12-201, Transcript of homeobox C12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC12, Length 3,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12-201ENST00000243103 PTH1RQ03431 593 aa17.5■□□□□ 0.39
HOXC12-201ENST00000243103 HSP90AB3PQ58FF7 597 aa17.5■□□□□ 0.39
HOXC12-201ENST00000243103 SPHKAPQ2M3C7 1700 aa17.5■□□□□ 0.39
HOXC12-201ENST00000243103 FRMD3A2A2Y4 597 aa17.49■□□□□ 0.39
HOXC12-201ENST00000243103 KINO60870 393 aaKnown RBP17.49■□□□□ 0.39
HOXC12-201ENST00000243103 NBPF7P0C2Y1 421 aaPredicted RBP17.49■□□□□ 0.39
HOXC12-201ENST00000243103 TRHP20396 242 aaPredicted RBP17.49■□□□□ 0.39
HOXC12-201ENST00000243103 CPLX3Q8WVH0 158 aa17.49■□□□□ 0.39
HOXC12-201ENST00000243103 KCNG1Q9UIX4 513 aa17.49■□□□□ 0.39
HOXC12-201ENST00000243103 CCDC171Q6TFL3 1326 aa17.49■□□□□ 0.39
HOXC12-201ENST00000243103 GNAI2P04899 355 aa17.49■□□□□ 0.39
HOXC12-201ENST00000243103 DESI2Q9BSY9 194 aa17.49■□□□□ 0.39
HOXC12-201ENST00000243103 MAP3K4Q9Y6R4 1608 aa17.49■□□□□ 0.39
HOXC12-201ENST00000243103 ATP2B2Q01814 1243 aa17.48■□□□□ 0.39
HOXC12-201ENST00000243103 CWF19L2Q2TBE0 894 aaKnown RBP17.48■□□□□ 0.39
HOXC12-201ENST00000243103 NOM1Q5C9Z4 860 aaKnown RBP17.48■□□□□ 0.39
HOXC12-201ENST00000243103 CCDC73Q6ZRK6 1079 aa17.48■□□□□ 0.39
HOXC12-201ENST00000243103 PPP1R13BQ96KQ4 1090 aa17.48■□□□□ 0.39
HOXC12-201ENST00000243103 RPGRIP1LQ68CZ1 1315 aa17.48■□□□□ 0.39
HOXC12-201ENST00000243103 MROH2AA6NES4 1674 aa17.48■□□□□ 0.39
HOXC12-201ENST00000243103 CCT2P78371 535 aaKnown RBP17.48■□□□□ 0.39
HOXC12-201ENST00000243103 CCAR1Q8IX12 1150 aaKnown RBP17.48■□□□□ 0.39
HOXC12-201ENST00000243103 ARFGAP3Q9NP61 516 aa17.48■□□□□ 0.39
HOXC12-201ENST00000243103 ARHGAP31Q2M1Z3 1444 aa17.48■□□□□ 0.39
HOXC12-201ENST00000243103 SLC39A6Q13433 755 aa17.47■□□□□ 0.39
HOXC12-201ENST00000243103 PPP1R42Q7Z4L9 355 aa17.47■□□□□ 0.39
HOXC12-201ENST00000243103 SIRT1Q96EB6 747 aa17.47■□□□□ 0.39
HOXC12-201ENST00000243103 IRX2Q9BZI1 471 aaPredicted RBP17.47■□□□□ 0.39
HOXC12-201ENST00000243103 XPO4Q9C0E2 1151 aaKnown RBP17.47■□□□□ 0.39
HOXC12-201ENST00000243103 A0A1B0GVL5 298 aa17.47■□□□□ 0.39
HOXC12-201ENST00000243103 PI4KAP2A4QPH2 592 aa17.47■□□□□ 0.39
HOXC12-201ENST00000243103 SERPINC1P01008 464 aa17.47■□□□□ 0.39
HOXC12-201ENST00000243103 CFAP100Q494V2 611 aa17.47■□□□□ 0.39
HOXC12-201ENST00000243103 PI4KAP1Q8N8J0 262 aa17.47■□□□□ 0.39
HOXC12-201ENST00000243103 RNF17Q9BXT8 1623 aaKnown RBP17.47■□□□□ 0.39
HOXC12-201ENST00000243103 LTKP29376 864 aa17.47■□□□□ 0.39
HOXC12-201ENST00000243103 ZC3H6P61129 1189 aaKnown RBP17.47■□□□□ 0.39
HOXC12-201ENST00000243103 CT47A1Q5JQC4 288 aaPredicted RBP17.47■□□□□ 0.39
HOXC12-201ENST00000243103 MYCBPQ99417 103 aaPredicted RBP17.47■□□□□ 0.39
HOXC12-201ENST00000243103 RTL1A6NKG5 1358 aa17.47■□□□□ 0.39
HOXC12-201ENST00000243103 HAP1P54257 671 aaPredicted RBP17.46■□□□□ 0.39
HOXC12-201ENST00000243103 SF3A3Q12874 501 aaKnown RBP eCLIP17.46■□□□□ 0.39
HOXC12-201ENST00000243103 OTUD7BQ6GQQ9 843 aa17.46■□□□□ 0.39
HOXC12-201ENST00000243103 LEO1Q8WVC0 666 aaPredicted RBP17.46■□□□□ 0.39
HOXC12-201ENST00000243103 DDX17Q92841 729 aaKnown RBP17.46■□□□□ 0.39
HOXC12-201ENST00000243103 KIF1BPQ96EK5 621 aa17.46■□□□□ 0.39
HOXC12-201ENST00000243103 LZTFL1Q9NQ48 299 aa17.46■□□□□ 0.39
HOXC12-201ENST00000243103 TPCN1Q9ULQ1 816 aa17.46■□□□□ 0.39
HOXC12-201ENST00000243103 BRPF1P55201 1214 aaPredicted RBP17.46■□□□□ 0.39
HOXC12-201ENST00000243103 C9orf78Q9NZ63 289 aaPredicted RBP17.46■□□□□ 0.39
HOXC12-201ENST00000243103 SLFNL1Q499Z3 407 aa17.46■□□□□ 0.38
HOXC12-201ENST00000243103 SRLQ86TD4 932 aa17.46■□□□□ 0.38
HOXC12-201ENST00000243103 AMOTL2Q9Y2J4 779 aa17.46■□□□□ 0.38
HOXC12-201ENST00000243103 FAN1Q9Y2M0 1017 aa17.46■□□□□ 0.38
HOXC12-201ENST00000243103 TTC21BQ7Z4L5 1316 aa17.45■□□□□ 0.38
HOXC12-201ENST00000243103 ZKSCAN1P17029 563 aaPredicted RBP17.45■□□□□ 0.38
HOXC12-201ENST00000243103 E4F1Q66K89 784 aaPredicted RBP17.45■□□□□ 0.38
HOXC12-201ENST00000243103 PRPF38AQ8NAV1 312 aaKnown RBP17.45■□□□□ 0.38
HOXC12-201ENST00000243103 CHPF2Q9P2E5 772 aa17.45■□□□□ 0.38
HOXC12-201ENST00000243103 A0A1B0GUL7 405 aa17.45■□□□□ 0.38
HOXC12-201ENST00000243103 NOP2P46087 812 aaKnown RBP17.45■□□□□ 0.38
HOXC12-201ENST00000243103 CHST3Q7LGC8 479 aa17.45■□□□□ 0.38
HOXC12-201ENST00000243103 PLA2G4DQ86XP0 818 aa17.45■□□□□ 0.38
HOXC12-201ENST00000243103 PGBD1Q96JS3 809 aa17.45■□□□□ 0.38
HOXC12-201ENST00000243103 POLR3DP05423 398 aaPredicted RBP17.44■□□□□ 0.38
HOXC12-201ENST00000243103 FSIP1Q8NA03 581 aa17.44■□□□□ 0.38
HOXC12-201ENST00000243103 TAF6LQ9Y6J9 622 aa17.44■□□□□ 0.38
HOXC12-201ENST00000243103 PPRC1Q5VV67 1664 aaKnown RBP17.44■□□□□ 0.38
HOXC12-201ENST00000243103 H0YHG0 523 aa17.44■□□□□ 0.38
HOXC12-201ENST00000243103 H3BQF6 201 aa17.44■□□□□ 0.38
HOXC12-201ENST00000243103 CCZ1BP86790 482 aa17.44■□□□□ 0.38
HOXC12-201ENST00000243103 CCZ1P86791 482 aaPredicted RBP17.44■□□□□ 0.38
HOXC12-201ENST00000243103 DNAAF4Q8WXU2 420 aa17.44■□□□□ 0.38
HOXC12-201ENST00000243103 BRF1Q92994 677 aa17.44■□□□□ 0.38
HOXC12-201ENST00000243103 BOLA2Q9H3K6 86 aa17.44■□□□□ 0.38
HOXC12-201ENST00000243103 ORC3Q9UBD5 711 aaPredicted RBP17.44■□□□□ 0.38
HOXC12-201ENST00000243103 PTPRCP08575 1304 aa17.44■□□□□ 0.38
HOXC12-201ENST00000243103 HSP90B2PQ58FF3 399 aa17.44■□□□□ 0.38
HOXC12-201ENST00000243103 EIF3CLB5ME19 914 aaKnown RBP17.43■□□□□ 0.38
HOXC12-201ENST00000243103 ATP1A3P13637 1013 aa17.43■□□□□ 0.38
HOXC12-201ENST00000243103 LONRF3Q496Y0 759 aa17.43■□□□□ 0.38
HOXC12-201ENST00000243103 ESCO1Q5FWF5 840 aa17.43■□□□□ 0.38
HOXC12-201ENST00000243103 EIF3CQ99613 913 aaKnown RBP17.43■□□□□ 0.38
HOXC12-201ENST00000243103 RIMS2Q9UQ26 1411 aa17.43■□□□□ 0.38
HOXC12-201ENST00000243103 CCDC30Q5VVM6 783 aa17.43■□□□□ 0.38
HOXC12-201ENST00000243103 BICC1Q9H694 974 aaKnown RBP17.43■□□□□ 0.38
HOXC12-201ENST00000243103 TEFQ10587 303 aa17.42■□□□□ 0.38
HOXC12-201ENST00000243103 AXDND1Q5T1B0 1012 aaPredicted RBP17.42■□□□□ 0.38
HOXC12-201ENST00000243103 CCDC12Q8WUD4 166 aaPredicted RBP17.42■□□□□ 0.38
HOXC12-201ENST00000243103 CEP57L1Q8IYX8 460 aa17.42■□□□□ 0.38
HOXC12-201ENST00000243103 MED14O60244 1454 aa17.42■□□□□ 0.38
HOXC12-201ENST00000243103 KIRREL3Q8IZU9 778 aa17.42■□□□□ 0.38
HOXC12-201ENST00000243103 SEC62Q99442 399 aaKnown RBP17.42■□□□□ 0.38
HOXC12-201ENST00000243103 PARD6BQ9BYG5 372 aa17.42■□□□□ 0.38
HOXC12-201ENST00000243103 SLC24A3Q9HC58 644 aa17.42■□□□□ 0.38
HOXC12-201ENST00000243103 ERBB3P21860 1342 aa17.42■□□□□ 0.38
HOXC12-201ENST00000243103 ZMYND10O75800 440 aa17.41■□□□□ 0.38
HOXC12-201ENST00000243103 HSPA4P34932 840 aa17.41■□□□□ 0.38
HOXC12-201ENST00000243103 ANAPC15P60006 121 aa17.41■□□□□ 0.38
HOXC12-201ENST00000243103 PPP2R3AQ06190 1150 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms