RNA–Protein interactions for RNA: ENST00000239444.3

PCDHB8-201, Transcript of protocadherin beta 8, humanhuman

APPRIS P1 BASIC

Gene PCDHB8, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8-201ENST00000239444 MAP3K11Q16584 847 aa18.26■□□□□ 0.51
PCDHB8-201ENST00000239444 ANO6Q4KMQ2 910 aa18.26■□□□□ 0.51
PCDHB8-201ENST00000239444 EPHA10Q5JZY3 1008 aa18.26■□□□□ 0.51
PCDHB8-201ENST00000239444 CCDC129Q6ZRS4 1044 aa18.26■□□□□ 0.51
PCDHB8-201ENST00000239444 C1orf167Q5SNV9 1468 aa18.26■□□□□ 0.51
PCDHB8-201ENST00000239444 KIF1AQ12756 1690 aa18.26■□□□□ 0.51
PCDHB8-201ENST00000239444 CHMP4AQ9BY43 222 aa18.26■□□□□ 0.51
PCDHB8-201ENST00000239444 CEBPZQ03701 1054 aaKnown RBP18.25■□□□□ 0.51
PCDHB8-201ENST00000239444 C1orf141Q5JVX7 400 aa18.25■□□□□ 0.51
PCDHB8-201ENST00000239444 PRIMPOLQ96LW4 560 aa18.25■□□□□ 0.51
PCDHB8-201ENST00000239444 BCL2L12Q9HB09 334 aa18.25■□□□□ 0.51
PCDHB8-201ENST00000239444 OVOS2A0A0G2JMS6 1433 aa18.25■□□□□ 0.51
PCDHB8-201ENST00000239444 ERC1Q8IUD2 1116 aa18.25■□□□□ 0.51
PCDHB8-201ENST00000239444 SPATA32Q96LK8 384 aa18.25■□□□□ 0.51
PCDHB8-201ENST00000239444 SEC62Q99442 399 aaKnown RBP18.25■□□□□ 0.51
PCDHB8-201ENST00000239444 TNMDQ9H2S6 317 aa18.25■□□□□ 0.51
PCDHB8-201ENST00000239444 RGPD5Q99666 1765 aa18.25■□□□□ 0.51
PCDHB8-201ENST00000239444 A0A087WWV3 80 aa18.24■□□□□ 0.51
PCDHB8-201ENST00000239444 RIOK3O14730 519 aaKnown RBP18.24■□□□□ 0.51
PCDHB8-201ENST00000239444 NR1I2O75469 434 aa18.24■□□□□ 0.51
PCDHB8-201ENST00000239444 ALDH1L1O75891 902 aa18.24■□□□□ 0.51
PCDHB8-201ENST00000239444 FAM200AQ8TCP9 573 aa18.24■□□□□ 0.51
PCDHB8-201ENST00000239444 GOLGA6L4A6NEF3 574 aa18.24■□□□□ 0.51
PCDHB8-201ENST00000239444 IGKV5-2P06315 115 aa18.24■□□□□ 0.51
PCDHB8-201ENST00000239444 RPS6KB1P23443 525 aa18.24■□□□□ 0.51
PCDHB8-201ENST00000239444 SLFNL1Q499Z3 407 aa18.24■□□□□ 0.51
PCDHB8-201ENST00000239444 CBX8Q9HC52 389 aa18.24■□□□□ 0.51
PCDHB8-201ENST00000239444 KIF3AQ9Y496 699 aa18.24■□□□□ 0.51
PCDHB8-201ENST00000239444 COL15A1P39059 1388 aa18.24■□□□□ 0.51
PCDHB8-201ENST00000239444 ZC3H6P61129 1189 aaKnown RBP18.23■□□□□ 0.51
PCDHB8-201ENST00000239444 HMGN5P82970 282 aaKnown RBP18.23■□□□□ 0.51
PCDHB8-201ENST00000239444 CBX1P83916 185 aa18.23■□□□□ 0.51
PCDHB8-201ENST00000239444 CCDC186Q7Z3E2 898 aa18.23■□□□□ 0.51
PCDHB8-201ENST00000239444 MST1RQ04912 1400 aa18.23■□□□□ 0.51
PCDHB8-201ENST00000239444 C19orf44Q9H6X5 657 aa18.23■□□□□ 0.51
PCDHB8-201ENST00000239444 DRC7Q8IY82 874 aa18.22■□□□□ 0.51
PCDHB8-201ENST00000239444 LINS1Q8NG48 757 aa18.22■□□□□ 0.51
PCDHB8-201ENST00000239444 LEO1Q8WVC0 666 aaPredicted RBP18.22■□□□□ 0.51
PCDHB8-201ENST00000239444 PGBD1Q96JS3 809 aa18.22■□□□□ 0.51
PCDHB8-201ENST00000239444 ALS2Q96Q42 1657 aa18.22■□□□□ 0.51
PCDHB8-201ENST00000239444 PSMA5P28066 241 aa18.22■□□□□ 0.51
PCDHB8-201ENST00000239444 RIC3Q7Z5B4 369 aa18.22■□□□□ 0.51
PCDHB8-201ENST00000239444 CCDC94Q9BW85 323 aaPredicted RBP18.22■□□□□ 0.51
PCDHB8-201ENST00000239444 FTOQ9C0B1 505 aaKnown RBP eCLIP18.22■□□□□ 0.51
PCDHB8-201ENST00000239444 DNAJC25Q9H1X3 360 aa18.22■□□□□ 0.51
PCDHB8-201ENST00000239444 SIPA1L3O60292 1781 aaPredicted RBP18.22■□□□□ 0.51
PCDHB8-201ENST00000239444 BICD2Q8TD16 824 aa18.22■□□□□ 0.51
PCDHB8-201ENST00000239444 HEG1Q9ULI3 1381 aa18.21■□□□□ 0.51
PCDHB8-201ENST00000239444 ATP2B3Q16720 1220 aa18.21■□□□□ 0.51
PCDHB8-201ENST00000239444 PDIA6Q15084 440 aa18.21■□□□□ 0.5
PCDHB8-201ENST00000239444 PPP4R3BQ5MIZ7 849 aa18.21■□□□□ 0.5
PCDHB8-201ENST00000239444 MTERF4Q7Z6M4 381 aaKnown RBP18.21■□□□□ 0.5
PCDHB8-201ENST00000239444 C16orf45Q96MC5 204 aaPredicted RBP18.21■□□□□ 0.5
PCDHB8-201ENST00000239444 DNAJC2Q99543 621 aaKnown RBP18.21■□□□□ 0.5
PCDHB8-201ENST00000239444 ADAMTS7Q9UKP4 1686 aa18.2■□□□□ 0.5
PCDHB8-201ENST00000239444 SPDYE4A6NLX3 237 aa18.2■□□□□ 0.5
PCDHB8-201ENST00000239444 GTF2F1P35269 517 aaKnown RBP eCLIP18.2■□□□□ 0.5
PCDHB8-201ENST00000239444 BRF1Q92994 677 aa18.2■□□□□ 0.5
PCDHB8-201ENST00000239444 TRIM5Q9C035 493 aa18.2■□□□□ 0.5
PCDHB8-201ENST00000239444 MED23Q9ULK4 1368 aa18.2■□□□□ 0.5
PCDHB8-201ENST00000239444 ERBB3P21860 1342 aa18.2■□□□□ 0.5
PCDHB8-201ENST00000239444 TAF5LO75529 589 aa18.2■□□□□ 0.5
PCDHB8-201ENST00000239444 MYD88Q99836 296 aa18.2■□□□□ 0.5
PCDHB8-201ENST00000239444 LMTK3Q96Q04 1460 aa18.19■□□□□ 0.5
PCDHB8-201ENST00000239444 HSP90B1P14625 803 aaKnown RBP18.19■□□□□ 0.5
PCDHB8-201ENST00000239444 RNF20Q5VTR2 975 aa18.19■□□□□ 0.5
PCDHB8-201ENST00000239444 CABLES1Q8TDN4 633 aa18.19■□□□□ 0.5
PCDHB8-201ENST00000239444 DBNLQ9UJU6 430 aaKnown RBP18.19■□□□□ 0.5
PCDHB8-201ENST00000239444 PDCP20941 246 aa18.18■□□□□ 0.5
PCDHB8-201ENST00000239444 Q6ZUG5 572 aa18.18■□□□□ 0.5
PCDHB8-201ENST00000239444 XAGE3Q8WTP9 111 aa18.18■□□□□ 0.5
PCDHB8-201ENST00000239444 ERCC4Q92889 916 aaPredicted RBP18.18■□□□□ 0.5
PCDHB8-201ENST00000239444 ZHX1Q9UKY1 873 aaPredicted RBP18.18■□□□□ 0.5
PCDHB8-201ENST00000239444 ELP1O95163 1332 aa18.18■□□□□ 0.5
PCDHB8-201ENST00000239444 A0A0G2JLW4 131 aa18.17■□□□□ 0.5
PCDHB8-201ENST00000239444 HIP1O00291 1037 aa18.17■□□□□ 0.5
PCDHB8-201ENST00000239444 TFCP2Q12800 502 aa18.17■□□□□ 0.5
PCDHB8-201ENST00000239444 NAA30Q147X3 362 aaPredicted RBP18.17■□□□□ 0.5
PCDHB8-201ENST00000239444 DDX46Q7L014 1031 aaKnown RBP18.17■□□□□ 0.5
PCDHB8-201ENST00000239444 COPS6Q7L5N1 327 aa18.17■□□□□ 0.5
PCDHB8-201ENST00000239444 FBXW7Q969H0 707 aa18.17■□□□□ 0.5
PCDHB8-201ENST00000239444 GOLGA6L6A8MZA4 724 aa18.17■□□□□ 0.5
PCDHB8-201ENST00000239444 ARID5BQ14865 1188 aa18.17■□□□□ 0.5
PCDHB8-201ENST00000239444 SCAND2PQ9GZW5 306 aaPredicted RBP18.17■□□□□ 0.5
PCDHB8-201ENST00000239444 DDX21Q9NR30 783 aaKnown RBP eCLIP18.17■□□□□ 0.5
PCDHB8-201ENST00000239444 NEURL1BA8MQ27 555 aa18.16■□□□□ 0.5
PCDHB8-201ENST00000239444 ZNF165P49910 485 aa18.16■□□□□ 0.5
PCDHB8-201ENST00000239444 CCDC144BQ3MJ40 725 aa18.16■□□□□ 0.5
PCDHB8-201ENST00000239444 CCDC144CPQ8IYA2 1237 aa18.16■□□□□ 0.5
PCDHB8-201ENST00000239444 CLSTN2Q9H4D0 955 aa18.16■□□□□ 0.5
PCDHB8-201ENST00000239444 NPHP3Q7Z494 1330 aa18.16■□□□□ 0.5
PCDHB8-201ENST00000239444 ATP5J2-PTCD1G3V325 749 aa18.15■□□□□ 0.5
PCDHB8-201ENST00000239444 PTCD1O75127 700 aaKnown RBP18.15■□□□□ 0.5
PCDHB8-201ENST00000239444 DDX58O95786 925 aaKnown RBP18.15■□□□□ 0.5
PCDHB8-201ENST00000239444 CYP21A2P08686 494 aa18.15■□□□□ 0.5
PCDHB8-201ENST00000239444 U2AF2P26368 475 aaKnown RBP eCLIP18.15■□□□□ 0.5
PCDHB8-201ENST00000239444 ZNF75DP51815 510 aa18.15■□□□□ 0.5
PCDHB8-201ENST00000239444 ANKRD1Q15327 319 aa18.15■□□□□ 0.5
PCDHB8-201ENST00000239444 GTF3C6Q969F1 213 aa18.15■□□□□ 0.5
PCDHB8-201ENST00000239444 NEK1Q96PY6 1258 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms