RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 IDI1Q13907 227 aa15.36■□□□□ 0.05
NEK4-201ENST00000233027 RRAGBQ5VZM2 374 aa15.36■□□□□ 0.05
NEK4-201ENST00000233027 TRIM47Q96LD4 638 aa15.36■□□□□ 0.05
NEK4-201ENST00000233027 KAT14Q9H8E8 782 aa15.36■□□□□ 0.05
NEK4-201ENST00000233027 NAA15Q9BXJ9 866 aaKnown RBP15.36■□□□□ 0.05
NEK4-201ENST00000233027 CUL7Q14999 1698 aa15.36■□□□□ 0.05
NEK4-201ENST00000233027 ASXL1Q8IXJ9 1541 aa15.36■□□□□ 0.05
NEK4-201ENST00000233027 ANKRD36BQ8N2N9 1353 aa15.35■□□□□ 0.05
NEK4-201ENST00000233027 SEC24BO95487 1268 aa15.35■□□□□ 0.05
NEK4-201ENST00000233027 ALG1Q9BT22 464 aa15.35■□□□□ 0.05
NEK4-201ENST00000233027 ZGPATQ8N5A5 531 aaKnown RBP15.35■□□□□ 0.05
NEK4-201ENST00000233027 DRC1Q96MC2 740 aa15.35■□□□□ 0.05
NEK4-201ENST00000233027 AMPD3Q01432 767 aa15.35■□□□□ 0.05
NEK4-201ENST00000233027 ATP2C2O75185 946 aa15.35■□□□□ 0.05
NEK4-201ENST00000233027 SMC1AQ14683 1233 aaKnown RBP15.35■□□□□ 0.05
NEK4-201ENST00000233027 KANK3Q6NY19 840 aa15.35■□□□□ 0.05
NEK4-201ENST00000233027 SCLT1Q96NL6 688 aa15.35■□□□□ 0.05
NEK4-201ENST00000233027 ZMYND15Q9H091 742 aa15.35■□□□□ 0.05
NEK4-201ENST00000233027 UBA7P41226 1012 aa15.34■□□□□ 0.05
NEK4-201ENST00000233027 FAM114A1Q8IWE2 563 aa15.34■□□□□ 0.05
NEK4-201ENST00000233027 FAM200AQ8TCP9 573 aa15.34■□□□□ 0.05
NEK4-201ENST00000233027 MAPKBP1O60336 1514 aa15.34■□□□□ 0.05
NEK4-201ENST00000233027 KRT222Q8N1A0 295 aa15.34■□□□□ 0.05
NEK4-201ENST00000233027 SNX21Q969T3 373 aa15.34■□□□□ 0.05
NEK4-201ENST00000233027 ZNF219Q9P2Y4 722 aaPredicted RBP15.34■□□□□ 0.05
NEK4-201ENST00000233027 RLBP1P12271 317 aa15.34■□□□□ 0.05
NEK4-201ENST00000233027 IPO4Q8TEX9 1081 aaKnown RBP15.34■□□□□ 0.05
NEK4-201ENST00000233027 C14orf93Q9H972 538 aaKnown RBP15.34■□□□□ 0.05
NEK4-201ENST00000233027 EXOC1Q9NV70 894 aa15.34■□□□□ 0.05
NEK4-201ENST00000233027 RALGAPBQ86X10 1494 aa15.34■□□□□ 0.05
NEK4-201ENST00000233027 CCDC175P0C221 793 aa15.33■□□□□ 0.05
NEK4-201ENST00000233027 NMIQ13287 307 aaPredicted RBP15.33■□□□□ 0.05
NEK4-201ENST00000233027 ANKRD44Q8N8A2 993 aa15.33■□□□□ 0.05
NEK4-201ENST00000233027 ACEP12821 1306 aa15.33■□□□□ 0.05
NEK4-201ENST00000233027 SRRTQ9BXP5 876 aaKnown RBP15.33■□□□□ 0.04
NEK4-201ENST00000233027 PA2G4Q9UQ80 394 aaKnown RBP15.33■□□□□ 0.04
NEK4-201ENST00000233027 PRC1O43663 620 aa15.33■□□□□ 0.04
NEK4-201ENST00000233027 TRIM21P19474 475 aaKnown RBP15.33■□□□□ 0.04
NEK4-201ENST00000233027 RAB3GAP1Q15042 981 aa15.33■□□□□ 0.04
NEK4-201ENST00000233027 MRPS27Q92552 414 aaKnown RBP15.33■□□□□ 0.04
NEK4-201ENST00000233027 ABCA10Q8WWZ4 1543 aa15.33■□□□□ 0.04
NEK4-201ENST00000233027 HSF2BPO75031 334 aa15.33■□□□□ 0.04
NEK4-201ENST00000233027 KIF20AO95235 890 aa15.33■□□□□ 0.04
NEK4-201ENST00000233027 PTGS1P23219 599 aa15.33■□□□□ 0.04
NEK4-201ENST00000233027 KIF5BP33176 963 aa15.33■□□□□ 0.04
NEK4-201ENST00000233027 AEBP2Q6ZN18 517 aaPredicted RBP15.33■□□□□ 0.04
NEK4-201ENST00000233027 CHST3Q7LGC8 479 aa15.33■□□□□ 0.04
NEK4-201ENST00000233027 ARHGAP45Q92619 1136 aa15.33■□□□□ 0.04
NEK4-201ENST00000233027 ZKSCAN5Q9Y2L8 839 aa15.33■□□□□ 0.04
NEK4-201ENST00000233027 CTNNA2P26232 953 aa15.32■□□□□ 0.04
NEK4-201ENST00000233027 WTAPQ15007 396 aa15.32■□□□□ 0.04
NEK4-201ENST00000233027 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.32■□□□□ 0.04
NEK4-201ENST00000233027 CD109Q6YHK3 1445 aa15.32■□□□□ 0.04
NEK4-201ENST00000233027 SYT1P21579 422 aa15.32■□□□□ 0.04
NEK4-201ENST00000233027 PPP4R3AQ6IN85 833 aa15.32■□□□□ 0.04
NEK4-201ENST00000233027 HMGXB3Q12766 1538 aa15.32■□□□□ 0.04
NEK4-201ENST00000233027 MCM6Q14566 821 aa15.32■□□□□ 0.04
NEK4-201ENST00000233027 RPGRQ92834 1020 aaKnown RBP15.32■□□□□ 0.04
NEK4-201ENST00000233027 ZBTB43O43298 467 aa15.31■□□□□ 0.04
NEK4-201ENST00000233027 CAVIN2O95810 425 aa15.31■□□□□ 0.04
NEK4-201ENST00000233027 AK2P54819 239 aa15.31■□□□□ 0.04
NEK4-201ENST00000233027 POGZQ7Z3K3 1410 aa15.31■□□□□ 0.04
NEK4-201ENST00000233027 TYRO3Q06418 890 aa15.31■□□□□ 0.04
NEK4-201ENST00000233027 PDE4BQ07343 736 aa15.31■□□□□ 0.04
NEK4-201ENST00000233027 RTL1A6NKG5 1358 aa15.31■□□□□ 0.04
NEK4-201ENST00000233027 STAT6P42226 847 aa15.31■□□□□ 0.04
NEK4-201ENST00000233027 SF3B2Q13435 895 aaKnown RBP15.31■□□□□ 0.04
NEK4-201ENST00000233027 HOOK3Q86VS8 718 aa15.31■□□□□ 0.04
NEK4-201ENST00000233027 KCNG4Q8TDN1 519 aa15.31■□□□□ 0.04
NEK4-201ENST00000233027 ANKRD24Q8TF21 1146 aa15.31■□□□□ 0.04
NEK4-201ENST00000233027 ADAMTS2O95450 1211 aa15.31■□□□□ 0.04
NEK4-201ENST00000233027 RBM25P49756 843 aaKnown RBP15.31■□□□□ 0.04
NEK4-201ENST00000233027 MCMDC2Q4G0Z9 681 aa15.31■□□□□ 0.04
NEK4-201ENST00000233027 ANKRD13DQ6ZTN6 518 aa15.31■□□□□ 0.04
NEK4-201ENST00000233027 TAOK3Q9H2K8 898 aa15.31■□□□□ 0.04
NEK4-201ENST00000233027 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.31■□□□□ 0.04
NEK4-201ENST00000233027 ATP8B2P98198 1209 aa15.3■□□□□ 0.04
NEK4-201ENST00000233027 SYCP3Q8IZU3 236 aa15.3■□□□□ 0.04
NEK4-201ENST00000233027 IQSEC3Q9UPP2 1182 aaPredicted RBP15.3■□□□□ 0.04
NEK4-201ENST00000233027 AKR1B10O60218 316 aa15.3■□□□□ 0.04
NEK4-201ENST00000233027 LMOD1P29536 600 aaPredicted RBP15.3■□□□□ 0.04
NEK4-201ENST00000233027 IFNL2Q8IZJ0 200 aa15.3■□□□□ 0.04
NEK4-201ENST00000233027 CTAGE15A4D2H0 777 aa15.3■□□□□ 0.04
NEK4-201ENST00000233027 CTAGE8P0CG41 777 aa15.3■□□□□ 0.04
NEK4-201ENST00000233027 CTAGE6Q86UF2 777 aa15.3■□□□□ 0.04
NEK4-201ENST00000233027 CTAGE4Q8IX94 777 aa15.3■□□□□ 0.04
NEK4-201ENST00000233027 CEBPAP49715 358 aaPredicted RBP15.3■□□□□ 0.04
NEK4-201ENST00000233027 TSPYL6Q8N831 410 aa15.3■□□□□ 0.04
NEK4-201ENST00000233027 XAGE3Q8WTP9 111 aa15.29■□□□□ 0.04
NEK4-201ENST00000233027 SLC4A4Q9Y6R1 1079 aa15.29■□□□□ 0.04
NEK4-201ENST00000233027 THOC2Q8NI27 1593 aaKnown RBP15.29■□□□□ 0.04
NEK4-201ENST00000233027 DHX58Q96C10 678 aa15.29■□□□□ 0.04
NEK4-201ENST00000233027 TIGD1Q96MW7 591 aa15.29■□□□□ 0.04
NEK4-201ENST00000233027 RMND1Q9NWS8 449 aa15.29■□□□□ 0.04
NEK4-201ENST00000233027 RSPH14Q9UHP6 348 aa15.29■□□□□ 0.04
NEK4-201ENST00000233027 SLC39A6Q13433 755 aa15.29■□□□□ 0.04
NEK4-201ENST00000233027 IFIT1BQ5T764 474 aaKnown RBP15.29■□□□□ 0.04
NEK4-201ENST00000233027 CEP112Q8N8E3 955 aa15.29■□□□□ 0.04
NEK4-201ENST00000233027 PUF60Q9UHX1 559 aaKnown RBP15.29■□□□□ 0.04
NEK4-201ENST00000233027 KARSQ15046 597 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms