RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 RESTQ13127 1097 aa16.5■□□□□ 0.23
SCNN1A-201ENST00000228916 TSGA10IPQ3SY00 556 aa16.5■□□□□ 0.23
SCNN1A-201ENST00000228916 TCEANC2Q96MN5 208 aa16.5■□□□□ 0.23
SCNN1A-201ENST00000228916 CHMP4AQ9BY43 222 aa16.5■□□□□ 0.23
SCNN1A-201ENST00000228916 MED23Q9ULK4 1368 aa16.5■□□□□ 0.23
SCNN1A-201ENST00000228916 ZNF771Q7L3S4 317 aaPredicted RBP16.49■□□□□ 0.23
SCNN1A-201ENST00000228916 AACSQ86V21 672 aa16.49■□□□□ 0.23
SCNN1A-201ENST00000228916 TAF6LQ9Y6J9 622 aa16.49■□□□□ 0.23
SCNN1A-201ENST00000228916 PA2G4Q9UQ80 394 aaKnown RBP16.49■□□□□ 0.23
SCNN1A-201ENST00000228916 EID1Q9Y6B2 187 aa16.49■□□□□ 0.23
SCNN1A-201ENST00000228916 KDM3BQ7LBC6 1761 aa16.49■□□□□ 0.23
SCNN1A-201ENST00000228916 A0A0D9SFI3 127 aa16.48■□□□□ 0.23
SCNN1A-201ENST00000228916 ZNF397Q8NF99 534 aaPredicted RBP16.48■□□□□ 0.23
SCNN1A-201ENST00000228916 FAM53CQ9NYF3 392 aa16.48■□□□□ 0.23
SCNN1A-201ENST00000228916 HMG20BQ9P0W2 317 aa16.48■□□□□ 0.23
SCNN1A-201ENST00000228916 USP27XA6NNY8 438 aa16.48■□□□□ 0.23
SCNN1A-201ENST00000228916 ALDH1L1O75891 902 aa16.47■□□□□ 0.23
SCNN1A-201ENST00000228916 KCND1Q9NSA2 647 aa16.47■□□□□ 0.23
SCNN1A-201ENST00000228916 TBX22Q9Y458 520 aa16.47■□□□□ 0.23
SCNN1A-201ENST00000228916 GOLGA6L19H0YKK7 550 aa16.47■□□□□ 0.23
SCNN1A-201ENST00000228916 ARID5BQ14865 1188 aa16.47■□□□□ 0.23
SCNN1A-201ENST00000228916 KMT5BQ4FZB7 885 aa16.47■□□□□ 0.23
SCNN1A-201ENST00000228916 GTF3C6Q969F1 213 aa16.47■□□□□ 0.23
SCNN1A-201ENST00000228916 ZNF215Q9UL58 517 aaPredicted RBP16.47■□□□□ 0.23
SCNN1A-201ENST00000228916 LTN1O94822 1766 aa16.46■□□□□ 0.23
SCNN1A-201ENST00000228916 SETD1BQ9UPS6 1966 aaKnown RBP16.46■□□□□ 0.23
SCNN1A-201ENST00000228916 PTPN14Q15678 1187 aa16.46■□□□□ 0.23
SCNN1A-201ENST00000228916 NBPF6Q5VWK0 638 aa16.46■□□□□ 0.23
SCNN1A-201ENST00000228916 C11orf57Q6ZUT1 292 aaPredicted RBP16.46■□□□□ 0.23
SCNN1A-201ENST00000228916 ZNF592Q92610 1267 aa16.46■□□□□ 0.23
SCNN1A-201ENST00000228916 NBPF4Q96M43 638 aa16.46■□□□□ 0.23
SCNN1A-201ENST00000228916 SASH1O94885 1247 aa16.46■□□□□ 0.23
SCNN1A-201ENST00000228916 KRT222Q8N1A0 295 aa16.46■□□□□ 0.23
SCNN1A-201ENST00000228916 EAF2Q96CJ1 260 aaPredicted RBP16.46■□□□□ 0.23
SCNN1A-201ENST00000228916 ZSCAN16Q9H4T2 348 aaPredicted RBP16.46■□□□□ 0.23
SCNN1A-201ENST00000228916 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.46■□□□□ 0.23
SCNN1A-201ENST00000228916 USP54Q70EL1 1684 aa16.46■□□□□ 0.23
SCNN1A-201ENST00000228916 CTAGE5O15320 804 aa16.45■□□□□ 0.22
SCNN1A-201ENST00000228916 JAK2O60674 1132 aa16.45■□□□□ 0.22
SCNN1A-201ENST00000228916 CCZ1BP86790 482 aa16.45■□□□□ 0.22
SCNN1A-201ENST00000228916 CCZ1P86791 482 aaPredicted RBP16.45■□□□□ 0.22
SCNN1A-201ENST00000228916 STK3Q13188 491 aa16.45■□□□□ 0.22
SCNN1A-201ENST00000228916 TERF2Q15554 542 aa16.45■□□□□ 0.22
SCNN1A-201ENST00000228916 BRF1Q92994 677 aa16.45■□□□□ 0.22
SCNN1A-201ENST00000228916 CFAP45Q9UL16 551 aa16.45■□□□□ 0.22
SCNN1A-201ENST00000228916 SKILP12757 684 aa16.45■□□□□ 0.22
SCNN1A-201ENST00000228916 STX1AQ16623 288 aa16.45■□□□□ 0.22
SCNN1A-201ENST00000228916 SLFNL1Q499Z3 407 aa16.45■□□□□ 0.22
SCNN1A-201ENST00000228916 ERO1AQ96HE7 468 aa16.45■□□□□ 0.22
SCNN1A-201ENST00000228916 HDAC5Q9UQL6 1122 aa16.45■□□□□ 0.22
SCNN1A-201ENST00000228916 USPL1Q5W0Q7 1092 aa16.45■□□□□ 0.22
SCNN1A-201ENST00000228916 C9orf78Q9NZ63 289 aaPredicted RBP16.45■□□□□ 0.22
SCNN1A-201ENST00000228916 C14orf37Q86TY3 774 aa16.44■□□□□ 0.22
SCNN1A-201ENST00000228916 ZNF589Q86UQ0 364 aaPredicted RBP16.44■□□□□ 0.22
SCNN1A-201ENST00000228916 FSD1Q9BTV5 496 aa16.44■□□□□ 0.22
SCNN1A-201ENST00000228916 SLIT1O75093 1534 aa16.43■□□□□ 0.22
SCNN1A-201ENST00000228916 ERBB3P21860 1342 aa16.43■□□□□ 0.22
SCNN1A-201ENST00000228916 CCDC69A6NI79 296 aa16.43■□□□□ 0.22
SCNN1A-201ENST00000228916 ADD1P35611 737 aaKnown RBP16.43■□□□□ 0.22
SCNN1A-201ENST00000228916 BTBD11A6QL63 1104 aa16.43■□□□□ 0.22
SCNN1A-201ENST00000228916 KRT32Q14532 448 aa16.43■□□□□ 0.22
SCNN1A-201ENST00000228916 PROSER3Q2NL68 480 aa16.43■□□□□ 0.22
SCNN1A-201ENST00000228916 CCAR2Q8N163 923 aaKnown RBP16.43■□□□□ 0.22
SCNN1A-201ENST00000228916 MAP3K2Q9Y2U5 619 aa16.43■□□□□ 0.22
SCNN1A-201ENST00000228916 KIF13AQ9H1H9 1805 aa16.43■□□□□ 0.22
SCNN1A-201ENST00000228916 ANKARQ7Z5J8 1434 aa16.43■□□□□ 0.22
SCNN1A-201ENST00000228916 TAF5LO75529 589 aa16.43■□□□□ 0.22
SCNN1A-201ENST00000228916 CWF19L2Q2TBE0 894 aaKnown RBP16.43■□□□□ 0.22
SCNN1A-201ENST00000228916 FBXO38Q6PIJ6 1188 aa16.43■□□□□ 0.22
SCNN1A-201ENST00000228916 DHX40Q8IX18 779 aaKnown RBP16.43■□□□□ 0.22
SCNN1A-201ENST00000228916 CCDC8Q9H0W5 538 aaPredicted RBP16.43■□□□□ 0.22
SCNN1A-201ENST00000228916 TLR7Q9NYK1 1049 aaKnown RBP16.43■□□□□ 0.22
SCNN1A-201ENST00000228916 DBF4Q9UBU7 674 aaPredicted RBP16.43■□□□□ 0.22
SCNN1A-201ENST00000228916 RCOR1Q9UKL0 485 aa16.43■□□□□ 0.22
SCNN1A-201ENST00000228916 USP16Q9Y5T5 823 aa16.43■□□□□ 0.22
SCNN1A-201ENST00000228916 ARHGAP23Q9P227 1491 aa16.42■□□□□ 0.22
SCNN1A-201ENST00000228916 A0A0U1RQG5 324 aaPredicted RBP16.42■□□□□ 0.22
SCNN1A-201ENST00000228916 PLPPR3Q6T4P5 718 aa16.42■□□□□ 0.22
SCNN1A-201ENST00000228916 MPRIPQ6WCQ1 1025 aa16.42■□□□□ 0.22
SCNN1A-201ENST00000228916 RGPD2P0DJD1 1756 aa16.42■□□□□ 0.22
SCNN1A-201ENST00000228916 KCNA6P17658 529 aa16.42■□□□□ 0.22
SCNN1A-201ENST00000228916 DDX11Q96FC9 970 aa16.42■□□□□ 0.22
SCNN1A-201ENST00000228916 KAZALD1Q96I82 304 aa16.42■□□□□ 0.22
SCNN1A-201ENST00000228916 BOLA2Q9H3K6 86 aa16.42■□□□□ 0.22
SCNN1A-201ENST00000228916 MYH15Q9Y2K3 1946 aa16.42■□□□□ 0.22
SCNN1A-201ENST00000228916 H3BQV1 296 aa16.41■□□□□ 0.22
SCNN1A-201ENST00000228916 SNW1Q13573 536 aaKnown RBP16.41■□□□□ 0.22
SCNN1A-201ENST00000228916 IFFO2Q5TF58 517 aa16.41■□□□□ 0.22
SCNN1A-201ENST00000228916 KSR2Q6VAB6 950 aa16.41■□□□□ 0.22
SCNN1A-201ENST00000228916 IP6K1Q92551 441 aa16.41■□□□□ 0.22
SCNN1A-201ENST00000228916 UTYO14607 1347 aa16.41■□□□□ 0.22
SCNN1A-201ENST00000228916 KIF2AO00139 706 aaPredicted RBP16.41■□□□□ 0.22
SCNN1A-201ENST00000228916 G3BP1Q13283 466 aaKnown RBP eCLIP16.41■□□□□ 0.22
SCNN1A-201ENST00000228916 SMARCC2Q8TAQ2 1214 aa16.41■□□□□ 0.22
SCNN1A-201ENST00000228916 SLU7O95391 586 aaKnown RBP16.41■□□□□ 0.22
SCNN1A-201ENST00000228916 TEFQ10587 303 aa16.41■□□□□ 0.22
SCNN1A-201ENST00000228916 ELF2Q15723 593 aa16.41■□□□□ 0.22
SCNN1A-201ENST00000228916 CCAR1Q8IX12 1150 aaKnown RBP16.41■□□□□ 0.22
SCNN1A-201ENST00000228916 GOLPH3LQ9H4A5 285 aa16.41■□□□□ 0.22
SCNN1A-201ENST00000228916 PRAMEF22A3QJZ6 481 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms