RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 SGIP1Q9BQI5 828 aa17.52■□□□□ 0.4
SEC61B-201ENST00000223641 KDM2BQ8NHM5 1336 aa17.51■□□□□ 0.39
SEC61B-201ENST00000223641 HMMRO75330 724 aa17.51■□□□□ 0.39
SEC61B-201ENST00000223641 ST5P78524 1137 aa17.51■□□□□ 0.39
SEC61B-201ENST00000223641 C3orf67Q6ZVT6 689 aa17.51■□□□□ 0.39
SEC61B-201ENST00000223641 CCDC136Q96JN2 1154 aa17.51■□□□□ 0.39
SEC61B-201ENST00000223641 NLRP3Q96P20 1036 aa17.51■□□□□ 0.39
SEC61B-201ENST00000223641 RWDD1Q9H446 243 aaPredicted RBP17.51■□□□□ 0.39
SEC61B-201ENST00000223641 KIF13BQ9NQT8 1826 aa17.5■□□□□ 0.39
SEC61B-201ENST00000223641 ZBTB7AO95365 584 aa17.5■□□□□ 0.39
SEC61B-201ENST00000223641 CRY2Q49AN0 593 aa17.5■□□□□ 0.39
SEC61B-201ENST00000223641 B4GALNT3Q6L9W6 998 aa17.5■□□□□ 0.39
SEC61B-201ENST00000223641 CCDC24Q8N4L8 307 aa17.5■□□□□ 0.39
SEC61B-201ENST00000223641 BRIP1Q9BX63 1249 aa17.5■□□□□ 0.39
SEC61B-201ENST00000223641 PTPN12Q05209 780 aaKnown RBP17.49■□□□□ 0.39
SEC61B-201ENST00000223641 CCDC152Q4G0S7 254 aa17.49■□□□□ 0.39
SEC61B-201ENST00000223641 SMC5Q8IY18 1101 aa17.49■□□□□ 0.39
SEC61B-201ENST00000223641 GREM2Q9H772 168 aa17.49■□□□□ 0.39
SEC61B-201ENST00000223641 DCTPP1Q9H773 170 aa17.49■□□□□ 0.39
SEC61B-201ENST00000223641 COPRSQ9NQ92 184 aa17.49■□□□□ 0.39
SEC61B-201ENST00000223641 NOP58Q9Y2X3 529 aaKnown RBP17.49■□□□□ 0.39
SEC61B-201ENST00000223641 NPHP1O15259 732 aa17.48■□□□□ 0.39
SEC61B-201ENST00000223641 FAM161AQ3B820 660 aa17.48■□□□□ 0.39
SEC61B-201ENST00000223641 C10orf71Q711Q0 1435 aa17.47■□□□□ 0.39
SEC61B-201ENST00000223641 ITGA6P23229 1130 aa17.47■□□□□ 0.39
SEC61B-201ENST00000223641 PTGER2P43116 358 aa17.47■□□□□ 0.39
SEC61B-201ENST00000223641 ATF5Q9Y2D1 282 aaPredicted RBP17.47■□□□□ 0.39
SEC61B-201ENST00000223641 IFIT5Q13325 482 aaKnown RBP17.46■□□□□ 0.39
SEC61B-201ENST00000223641 CCDC57Q2TAC2 916 aa17.46■□□□□ 0.39
SEC61B-201ENST00000223641 CENPQQ7L2Z9 268 aaPredicted RBP17.46■□□□□ 0.39
SEC61B-201ENST00000223641 GCC1Q96CN9 775 aa17.46■□□□□ 0.39
SEC61B-201ENST00000223641 FBXO3Q9UK99 471 aa17.46■□□□□ 0.39
SEC61B-201ENST00000223641 LRP5O75197 1615 aa17.46■□□□□ 0.39
SEC61B-201ENST00000223641 TAF1P21675 1872 aa17.46■□□□□ 0.38
SEC61B-201ENST00000223641 ANKRD18BA2A2Z9 1011 aa17.45■□□□□ 0.38
SEC61B-201ENST00000223641 POLD1P28340 1107 aa17.45■□□□□ 0.38
SEC61B-201ENST00000223641 HOXA10P31260 410 aaPredicted RBP17.45■□□□□ 0.38
SEC61B-201ENST00000223641 PDE6BP35913 854 aa17.45■□□□□ 0.38
SEC61B-201ENST00000223641 CCDC85AQ96PX6 553 aaPredicted RBP17.45■□□□□ 0.38
SEC61B-201ENST00000223641 CHMP3Q9Y3E7 222 aa17.45■□□□□ 0.38
SEC61B-201ENST00000223641 COL4A1P02462 1669 aa17.45■□□□□ 0.38
SEC61B-201ENST00000223641 COL11A2P13942 1736 aaPredicted RBP17.44■□□□□ 0.38
SEC61B-201ENST00000223641 KLHDC4Q8TBB5 520 aa17.44■□□□□ 0.38
SEC61B-201ENST00000223641 SEC31BQ9NQW1 1179 aa17.44■□□□□ 0.38
SEC61B-201ENST00000223641 PDZRN3Q9UPQ7 1066 aa17.44■□□□□ 0.38
SEC61B-201ENST00000223641 PA2G4Q9UQ80 394 aaKnown RBP17.44■□□□□ 0.38
SEC61B-201ENST00000223641 SURF6O75683 361 aaKnown RBP17.43■□□□□ 0.38
SEC61B-201ENST00000223641 SRGNP10124 158 aa17.43■□□□□ 0.38
SEC61B-201ENST00000223641 ZNF594Q96JF6 807 aaPredicted RBP17.43■□□□□ 0.38
SEC61B-201ENST00000223641 KIAA1551Q9HCM1 1747 aa17.43■□□□□ 0.38
SEC61B-201ENST00000223641 DLEC1Q9Y238 1755 aa17.43■□□□□ 0.38
SEC61B-201ENST00000223641 CIAO1O76071 339 aa17.42■□□□□ 0.38
SEC61B-201ENST00000223641 HSP90AB4PQ58FF6 505 aa17.42■□□□□ 0.38
SEC61B-201ENST00000223641 ATG9AQ7Z3C6 839 aa17.42■□□□□ 0.38
SEC61B-201ENST00000223641 CRAMP1Q96RY5 1269 aa17.42■□□□□ 0.38
SEC61B-201ENST00000223641 CDC5LQ99459 802 aaKnown RBP17.42■□□□□ 0.38
SEC61B-201ENST00000223641 SPON1Q9HCB6 807 aa17.42■□□□□ 0.38
SEC61B-201ENST00000223641 EXOC6BQ9Y2D4 811 aa17.42■□□□□ 0.38
SEC61B-201ENST00000223641 EYA2O00167 538 aa17.41■□□□□ 0.38
SEC61B-201ENST00000223641 RAB11FIP3O75154 756 aa17.41■□□□□ 0.38
SEC61B-201ENST00000223641 DDX46Q7L014 1031 aaKnown RBP17.41■□□□□ 0.38
SEC61B-201ENST00000223641 RIPOR2Q9Y4F9 1068 aa17.41■□□□□ 0.38
SEC61B-201ENST00000223641 SPEF2Q9C093 1822 aa17.41■□□□□ 0.38
SEC61B-201ENST00000223641 SASH1O94885 1247 aa17.4■□□□□ 0.38
SEC61B-201ENST00000223641 NPR1P16066 1061 aa17.4■□□□□ 0.38
SEC61B-201ENST00000223641 RPS8P62241 208 aaKnown RBP17.4■□□□□ 0.38
SEC61B-201ENST00000223641 GRAPQ13588 217 aa17.4■□□□□ 0.38
SEC61B-201ENST00000223641 GRAPLQ8TC17 118 aaPredicted RBP17.4■□□□□ 0.38
SEC61B-201ENST00000223641 RPGRQ92834 1020 aaKnown RBP17.4■□□□□ 0.38
SEC61B-201ENST00000223641 CELF1Q92879 486 aaKnown RBP17.4■□□□□ 0.38
SEC61B-201ENST00000223641 RBM17Q96I25 401 aaKnown RBP17.4■□□□□ 0.38
SEC61B-201ENST00000223641 PUS3Q9BZE2 481 aaKnown RBP17.4■□□□□ 0.38
SEC61B-201ENST00000223641 IL15P40933 162 aaPredicted RBP17.39■□□□□ 0.37
SEC61B-201ENST00000223641 NUCB1Q02818 461 aa17.39■□□□□ 0.37
SEC61B-201ENST00000223641 G3BP1Q13283 466 aaKnown RBP eCLIP17.39■□□□□ 0.37
SEC61B-201ENST00000223641 LRRC24Q50LG9 513 aa17.39■□□□□ 0.37
SEC61B-201ENST00000223641 TAF7LQ5H9L4 462 aa17.39■□□□□ 0.37
SEC61B-201ENST00000223641 LDHAL6AQ6ZMR3 332 aa17.39■□□□□ 0.37
SEC61B-201ENST00000223641 ERC1Q8IUD2 1116 aa17.39■□□□□ 0.37
SEC61B-201ENST00000223641 MASTLQ96GX5 879 aa17.39■□□□□ 0.37
SEC61B-201ENST00000223641 BSDC1Q9NW68 430 aaPredicted RBP17.39■□□□□ 0.37
SEC61B-201ENST00000223641 A0A1B0GUL6 1792 aa17.38■□□□□ 0.37
SEC61B-201ENST00000223641 H0YIN7 160 aa17.38■□□□□ 0.37
SEC61B-201ENST00000223641 IGHMBP2P38935 993 aaKnown RBP17.38■□□□□ 0.37
SEC61B-201ENST00000223641 TGFB2P61812 414 aa17.38■□□□□ 0.37
SEC61B-201ENST00000223641 STYK1Q6J9G0 422 aa17.38■□□□□ 0.37
SEC61B-201ENST00000223641 C2CD5Q86YS7 1000 aa17.38■□□□□ 0.37
SEC61B-201ENST00000223641 ANKRD18AQ8IVF6 992 aa17.38■□□□□ 0.37
SEC61B-201ENST00000223641 RHPN1Q8TCX5 695 aa17.38■□□□□ 0.37
SEC61B-201ENST00000223641 KIF1BPQ96EK5 621 aa17.38■□□□□ 0.37
SEC61B-201ENST00000223641 SIL1Q9H173 461 aa17.38■□□□□ 0.37
SEC61B-201ENST00000223641 CD2APQ9Y5K6 639 aa17.38■□□□□ 0.37
SEC61B-201ENST00000223641 BBOX1O75936 387 aa17.37■□□□□ 0.37
SEC61B-201ENST00000223641 KCNA3P22001 575 aa17.37■□□□□ 0.37
SEC61B-201ENST00000223641 ALDH1B1P30837 517 aa17.37■□□□□ 0.37
SEC61B-201ENST00000223641 MPHOSPH8Q99549 860 aa17.37■□□□□ 0.37
SEC61B-201ENST00000223641 LRRCC1Q9C099 1032 aa17.37■□□□□ 0.37
SEC61B-201ENST00000223641 LRRC37AA6NMS7 1700 aa17.36■□□□□ 0.37
SEC61B-201ENST00000223641 BRCA1P38398 1863 aaKnown RBP17.36■□□□□ 0.37
SEC61B-201ENST00000223641 ANKRD45Q5TZF3 282 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms