RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 IP6K1Q92551 441 aa20.31■□□□□ 0.84
H2AFV-201ENST00000222690 AKAP4Q5JQC9 854 aa20.31■□□□□ 0.84
H2AFV-201ENST00000222690 SEC62Q99442 399 aaKnown RBP20.31■□□□□ 0.84
H2AFV-201ENST00000222690 GIGYF1O75420 1035 aaPredicted RBP20.31■□□□□ 0.84
H2AFV-201ENST00000222690 DDX19AQ9NUU7 478 aaKnown RBP20.31■□□□□ 0.84
H2AFV-201ENST00000222690 LINS1Q8NG48 757 aa20.3■□□□□ 0.84
H2AFV-201ENST00000222690 ERCC4Q92889 916 aaPredicted RBP20.3■□□□□ 0.84
H2AFV-201ENST00000222690 MYD88Q99836 296 aa20.3■□□□□ 0.84
H2AFV-201ENST00000222690 Q6ZUG5 572 aa20.3■□□□□ 0.84
H2AFV-201ENST00000222690 TOB2Q14106 344 aaPredicted RBP20.3■□□□□ 0.84
H2AFV-201ENST00000222690 DDX46Q7L014 1031 aaKnown RBP20.3■□□□□ 0.84
H2AFV-201ENST00000222690 RGPD1P0DJD0 1748 aa20.3■□□□□ 0.84
H2AFV-201ENST00000222690 PXDNLA1KZ92 1463 aa20.3■□□□□ 0.84
H2AFV-201ENST00000222690 RNMTO43148 476 aaKnown RBP20.29■□□□□ 0.84
H2AFV-201ENST00000222690 CCT2P78371 535 aaKnown RBP20.29■□□□□ 0.84
H2AFV-201ENST00000222690 FTOQ9C0B1 505 aaKnown RBP eCLIP20.29■□□□□ 0.841e-16■■□□□ 11.6
H2AFV-201ENST00000222690 TBX22Q9Y458 520 aa20.29■□□□□ 0.84
H2AFV-201ENST00000222690 HOXB7P09629 217 aa20.29■□□□□ 0.84
H2AFV-201ENST00000222690 NEK1Q96PY6 1258 aa20.29■□□□□ 0.84
H2AFV-201ENST00000222690 XRN1Q8IZH2 1706 aaKnown RBP20.28■□□□□ 0.84
H2AFV-201ENST00000222690 NAA30Q147X3 362 aaPredicted RBP20.28■□□□□ 0.84
H2AFV-201ENST00000222690 PRDM4Q9UKN5 801 aa20.28■□□□□ 0.84
H2AFV-201ENST00000222690 USP42Q9H9J4 1324 aaKnown RBP20.28■□□□□ 0.84
H2AFV-201ENST00000222690 ZNF75DP51815 510 aa20.28■□□□□ 0.84
H2AFV-201ENST00000222690 MTX1Q13505 466 aa20.28■□□□□ 0.84
H2AFV-201ENST00000222690 NEUROD6Q96NK8 337 aa20.28■□□□□ 0.84
H2AFV-201ENST00000222690 PGBD1Q96JS3 809 aa20.27■□□□□ 0.84
H2AFV-201ENST00000222690 CLSTN2Q9H4D0 955 aa20.27■□□□□ 0.84
H2AFV-201ENST00000222690 TRMT1Q9NXH9 659 aaKnown RBP20.27■□□□□ 0.84
H2AFV-201ENST00000222690 NPHP1O15259 732 aa20.27■□□□□ 0.84
H2AFV-201ENST00000222690 GTF2F1P35269 517 aaKnown RBP eCLIP20.27■□□□□ 0.83
H2AFV-201ENST00000222690 ZSCAN25Q6NSZ9 544 aa20.27■□□□□ 0.83
H2AFV-201ENST00000222690 CCDC112Q8NEF3 446 aa20.27■□□□□ 0.83
H2AFV-201ENST00000222690 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.27■□□□□ 0.83
H2AFV-201ENST00000222690 V9GYY5 206 aaPredicted RBP20.27■□□□□ 0.83
H2AFV-201ENST00000222690 KAZALD1Q96I82 304 aa20.26■□□□□ 0.83
H2AFV-201ENST00000222690 FAM208AQ9UK61 1670 aaKnown RBP20.26■□□□□ 0.83
H2AFV-201ENST00000222690 ATP5J2-PTCD1G3V325 749 aa20.26■□□□□ 0.83
H2AFV-201ENST00000222690 PTCD1O75127 700 aaKnown RBP20.26■□□□□ 0.83
H2AFV-201ENST00000222690 ARID5BQ14865 1188 aa20.26■□□□□ 0.83
H2AFV-201ENST00000222690 CHST3Q7LGC8 479 aa20.26■□□□□ 0.83
H2AFV-201ENST00000222690 CEMIPQ8WUJ3 1361 aa20.25■□□□□ 0.83
H2AFV-201ENST00000222690 SLFNL1Q499Z3 407 aa20.25■□□□□ 0.83
H2AFV-201ENST00000222690 COPS6Q7L5N1 327 aa20.25■□□□□ 0.83
H2AFV-201ENST00000222690 XAGE3Q8WTP9 111 aa20.25■□□□□ 0.83
H2AFV-201ENST00000222690 ZRSR1Q15695 479 aaKnown RBP20.25■□□□□ 0.83
H2AFV-201ENST00000222690 CCDC73Q6ZRK6 1079 aa20.25■□□□□ 0.83
H2AFV-201ENST00000222690 THEMISQ8N1K5 641 aaPredicted RBP20.25■□□□□ 0.83
H2AFV-201ENST00000222690 CACTINQ8WUQ7 758 aaKnown RBP20.25■□□□□ 0.83
H2AFV-201ENST00000222690 TAF5LO75529 589 aa20.25■□□□□ 0.83
H2AFV-201ENST00000222690 ME1P48163 572 aa20.25■□□□□ 0.83
H2AFV-201ENST00000222690 TFCP2Q12800 502 aa20.25■□□□□ 0.83
H2AFV-201ENST00000222690 EPHA10Q5JZY3 1008 aa20.25■□□□□ 0.83
H2AFV-201ENST00000222690 UBE3BQ7Z3V4 1068 aa20.25■□□□□ 0.83
H2AFV-201ENST00000222690 ELP1O95163 1332 aa20.24■□□□□ 0.83
H2AFV-201ENST00000222690 CCAR1Q8IX12 1150 aaKnown RBP20.24■□□□□ 0.83
H2AFV-201ENST00000222690 FMNL2Q96PY5 1086 aa20.24■□□□□ 0.83
H2AFV-201ENST00000222690 CFAP45Q9UL16 551 aa20.24■□□□□ 0.83
H2AFV-201ENST00000222690 USP16Q9Y5T5 823 aa20.24■□□□□ 0.83
H2AFV-201ENST00000222690 DIP2BQ9P265 1576 aa20.24■□□□□ 0.83
H2AFV-201ENST00000222690 CCDC144BQ3MJ40 725 aa20.23■□□□□ 0.83
H2AFV-201ENST00000222690 CCDC144CPQ8IYA2 1237 aa20.23■□□□□ 0.83
H2AFV-201ENST00000222690 NCOA5Q9HCD5 579 aaKnown RBP20.23■□□□□ 0.83
H2AFV-201ENST00000222690 KINO60870 393 aaKnown RBP20.23■□□□□ 0.83
H2AFV-201ENST00000222690 HMG20BQ9P0W2 317 aa20.23■□□□□ 0.83
H2AFV-201ENST00000222690 KRT32Q14532 448 aa20.23■□□□□ 0.83
H2AFV-201ENST00000222690 GTF3C6Q969F1 213 aa20.23■□□□□ 0.83
H2AFV-201ENST00000222690 DBNDD2Q9BQY9 259 aa20.23■□□□□ 0.83
H2AFV-201ENST00000222690 IGKV5-2P06315 115 aa20.22■□□□□ 0.83
H2AFV-201ENST00000222690 APOBRQ0VD83 1088 aa20.22■□□□□ 0.83
H2AFV-201ENST00000222690 ANKRD24Q8TF21 1146 aa20.22■□□□□ 0.83
H2AFV-201ENST00000222690 DBNLQ9UJU6 430 aaKnown RBP20.22■□□□□ 0.83
H2AFV-201ENST00000222690 AMOTQ4VCS5 1084 aa20.22■□□□□ 0.83
H2AFV-201ENST00000222690 C11orf57Q6ZUT1 292 aaPredicted RBP20.22■□□□□ 0.83
H2AFV-201ENST00000222690 KCNB2Q92953 911 aa20.22■□□□□ 0.83
H2AFV-201ENST00000222690 SDF4Q9BRK5 362 aa20.22■□□□□ 0.83
H2AFV-201ENST00000222690 DDX21Q9NR30 783 aaKnown RBP eCLIP20.22■□□□□ 0.83
H2AFV-201ENST00000222690 ZC3H6P61129 1189 aaKnown RBP20.22■□□□□ 0.83
H2AFV-201ENST00000222690 ZSCAN20P17040 1043 aaPredicted RBP20.21■□□□□ 0.83
H2AFV-201ENST00000222690 CYP21A2P08686 494 aa20.21■□□□□ 0.83
H2AFV-201ENST00000222690 FMN2Q9NZ56 1722 aa20.21■□□□□ 0.83
H2AFV-201ENST00000222690 SF3A1Q15459 793 aaKnown RBP20.2■□□□□ 0.82
H2AFV-201ENST00000222690 NLRP2Q9NX02 1062 aa20.2■□□□□ 0.82
H2AFV-201ENST00000222690 SCRN1Q12765 414 aa20.2■□□□□ 0.82
H2AFV-201ENST00000222690 GOLIM4O00461 696 aa20.2■□□□□ 0.82
H2AFV-201ENST00000222690 PDIA4P13667 645 aaKnown RBP20.2■□□□□ 0.82
H2AFV-201ENST00000222690 RAB11FIP4Q86YS3 637 aa20.2■□□□□ 0.82
H2AFV-201ENST00000222690 RGPD8O14715 1765 aaPredicted RBP20.2■□□□□ 0.82
H2AFV-201ENST00000222690 SKILP12757 684 aa20.19■□□□□ 0.82
H2AFV-201ENST00000222690 CEP135Q66GS9 1140 aa20.19■□□□□ 0.82
H2AFV-201ENST00000222690 KCNH5Q8NCM2 988 aa20.19■□□□□ 0.82
H2AFV-201ENST00000222690 TUBGCP6Q96RT7 1819 aa20.19■□□□□ 0.82
H2AFV-201ENST00000222690 DIP2AQ14689 1571 aa20.19■□□□□ 0.82
H2AFV-201ENST00000222690 NALCNQ8IZF0 1738 aa20.19■□□□□ 0.82
H2AFV-201ENST00000222690 GCP02774 474 aa20.19■□□□□ 0.82
H2AFV-201ENST00000222690 TDRD7Q8NHU6 1098 aaKnown RBP20.19■□□□□ 0.82
H2AFV-201ENST00000222690 SYTL4Q96C24 671 aaPredicted RBP20.19■□□□□ 0.82
H2AFV-201ENST00000222690 DMTNQ08495 405 aa20.19■□□□□ 0.82
H2AFV-201ENST00000222690 NCBP1Q09161 790 aaKnown RBP20.19■□□□□ 0.82
H2AFV-201ENST00000222690 RESTQ13127 1097 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms