RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 STAT6P42226 847 aa12.72□□□□□ -0.37
KNOP1-201ENST00000219837 NAA15Q9BXJ9 866 aaKnown RBP12.72□□□□□ -0.37
KNOP1-201ENST00000219837 KRT23Q9C075 422 aa12.72□□□□□ -0.37
KNOP1-201ENST00000219837 NCOA1Q15788 1441 aa12.71□□□□□ -0.37
KNOP1-201ENST00000219837 KIF2AO00139 706 aaPredicted RBP12.71□□□□□ -0.37
KNOP1-201ENST00000219837 PARP3Q9Y6F1 533 aa12.71□□□□□ -0.37
KNOP1-201ENST00000219837 KIF18AQ8NI77 898 aa12.71□□□□□ -0.37
KNOP1-201ENST00000219837 MRVI1Q9Y6F6 885 aa12.71□□□□□ -0.37
KNOP1-201ENST00000219837 TICAM2Q86XR7 235 aa12.71□□□□□ -0.38
KNOP1-201ENST00000219837 TFIP11Q9UBB9 837 aaKnown RBP12.71□□□□□ -0.38
KNOP1-201ENST00000219837 IQSEC3Q9UPP2 1182 aaPredicted RBP12.71□□□□□ -0.38
KNOP1-201ENST00000219837 RRAGBQ5VZM2 374 aa12.71□□□□□ -0.38
KNOP1-201ENST00000219837 KANK3Q6NY19 840 aa12.71□□□□□ -0.38
KNOP1-201ENST00000219837 ZCRB1Q8TBF4 217 aaKnown RBP12.71□□□□□ -0.38
KNOP1-201ENST00000219837 TRIM47Q96LD4 638 aa12.71□□□□□ -0.38
KNOP1-201ENST00000219837 ADGRF5Q8IZF2 1346 aa12.71□□□□□ -0.38
KNOP1-201ENST00000219837 STX6O43752 255 aa12.7□□□□□ -0.38
KNOP1-201ENST00000219837 SMARCC2Q8TAQ2 1214 aa12.7□□□□□ -0.38
KNOP1-201ENST00000219837 MBIPQ9NS73 344 aa12.7□□□□□ -0.38
KNOP1-201ENST00000219837 RMND1Q9NWS8 449 aa12.7□□□□□ -0.38
KNOP1-201ENST00000219837 AFMP43652 599 aa12.7□□□□□ -0.38
KNOP1-201ENST00000219837 C20orf194Q5TEA3 1177 aa12.7□□□□□ -0.38
KNOP1-201ENST00000219837 IL27Q8NEV9 243 aa12.7□□□□□ -0.38
KNOP1-201ENST00000219837 JADE2Q9NQC1 790 aa12.7□□□□□ -0.38
KNOP1-201ENST00000219837 CHPF2Q9P2E5 772 aa12.7□□□□□ -0.38
KNOP1-201ENST00000219837 ORC3Q9UBD5 711 aaPredicted RBP12.7□□□□□ -0.38
KNOP1-201ENST00000219837 MAGEB6P1A0A0J9YX57 407 aa12.7□□□□□ -0.38
KNOP1-201ENST00000219837 RIMBP2O15034 1052 aa12.7□□□□□ -0.38
KNOP1-201ENST00000219837 ECHDC1Q9NTX5 307 aa12.7□□□□□ -0.38
KNOP1-201ENST00000219837 ACEP12821 1306 aa12.7□□□□□ -0.38
KNOP1-201ENST00000219837 UBA7P41226 1012 aa12.7□□□□□ -0.38
KNOP1-201ENST00000219837 CTR9Q6PD62 1173 aa12.7□□□□□ -0.38
KNOP1-201ENST00000219837 TTC12Q9H892 705 aaPredicted RBP12.7□□□□□ -0.38
KNOP1-201ENST00000219837 FSD2A1L4K1 749 aa12.69□□□□□ -0.38
KNOP1-201ENST00000219837 PPP1R14CQ8TAE6 165 aa12.69□□□□□ -0.38
KNOP1-201ENST00000219837 STX8Q9UNK0 236 aa12.69□□□□□ -0.38
KNOP1-201ENST00000219837 GJC1P36383 396 aa12.69□□□□□ -0.38
KNOP1-201ENST00000219837 ARL1P40616 181 aaPredicted RBP12.69□□□□□ -0.38
KNOP1-201ENST00000219837 IKBKGQ9Y6K9 419 aa12.69□□□□□ -0.38
KNOP1-201ENST00000219837 POLR3GO15318 223 aaPredicted RBP12.69□□□□□ -0.38
KNOP1-201ENST00000219837 MCM5P33992 734 aa12.69□□□□□ -0.38
KNOP1-201ENST00000219837 IFI16Q16666 785 aaKnown RBP12.69□□□□□ -0.38
KNOP1-201ENST00000219837 NYXQ9GZU5 481 aa12.69□□□□□ -0.38
KNOP1-201ENST00000219837 KRT13P13646 458 aa12.69□□□□□ -0.38
KNOP1-201ENST00000219837 GDPD2Q9HCC8 539 aa12.69□□□□□ -0.38
KNOP1-201ENST00000219837 SERPINA10Q9UK55 444 aa12.69□□□□□ -0.38
KNOP1-201ENST00000219837 ZBTB21Q9ULJ3 1066 aa12.69□□□□□ -0.38
KNOP1-201ENST00000219837 NAPAP54920 295 aa12.68□□□□□ -0.38
KNOP1-201ENST00000219837 SKAP1Q86WV1 359 aa12.68□□□□□ -0.38
KNOP1-201ENST00000219837 CGNQ9P2M7 1197 aaKnown RBP12.68□□□□□ -0.38
KNOP1-201ENST00000219837 PI4KAP2A4QPH2 592 aa12.68□□□□□ -0.38
KNOP1-201ENST00000219837 SPECC1Q5M775 1068 aa12.68□□□□□ -0.38
KNOP1-201ENST00000219837 MICALCLQ6ZW33 695 aa12.68□□□□□ -0.38
KNOP1-201ENST00000219837 OGFOD1Q8N543 542 aa12.68□□□□□ -0.38
KNOP1-201ENST00000219837 PI4KAP1Q8N8J0 262 aa12.68□□□□□ -0.38
KNOP1-201ENST00000219837 DDX19AQ9NUU7 478 aaKnown RBP12.68□□□□□ -0.38
KNOP1-201ENST00000219837 NIP7Q9Y221 180 aaKnown RBP eCLIP12.68□□□□□ -0.38
KNOP1-201ENST00000219837 A0A1W2PRG0 241 aa12.68□□□□□ -0.38
KNOP1-201ENST00000219837 CCDC172P0C7W6 258 aa12.68□□□□□ -0.38
KNOP1-201ENST00000219837 POLD1P28340 1107 aa12.68□□□□□ -0.38
KNOP1-201ENST00000219837 KLF18A0A0U1RQI7 1052 aa12.68□□□□□ -0.38
KNOP1-201ENST00000219837 ACTN2P35609 894 aa12.68□□□□□ -0.38
KNOP1-201ENST00000219837 DDX23Q9BUQ8 820 aaKnown RBP12.68□□□□□ -0.38
KNOP1-201ENST00000219837 PLB1Q6P1J6 1458 aa12.68□□□□□ -0.38
KNOP1-201ENST00000219837 KIAA0586Q9BVV6 1533 aa12.68□□□□□ -0.38
KNOP1-201ENST00000219837 HMG20BQ9P0W2 317 aa12.68□□□□□ -0.38
KNOP1-201ENST00000219837 SCAF11Q99590 1463 aaKnown RBP12.68□□□□□ -0.38
KNOP1-201ENST00000219837 UBAP1LF5GYI3 381 aa12.67□□□□□ -0.38
KNOP1-201ENST00000219837 POTEB2H3BUK9 544 aa12.67□□□□□ -0.38
KNOP1-201ENST00000219837 RTN1Q16799 776 aa12.67□□□□□ -0.38
KNOP1-201ENST00000219837 NAA16Q6N069 864 aaPredicted RBP12.67□□□□□ -0.38
KNOP1-201ENST00000219837 DENND4BO75064 1496 aaPredicted RBP12.67□□□□□ -0.38
KNOP1-201ENST00000219837 ANXA1P04083 346 aa12.67□□□□□ -0.38
KNOP1-201ENST00000219837 TBC1D9Q6ZT07 1266 aa12.67□□□□□ -0.38
KNOP1-201ENST00000219837 ANKRD13DQ6ZTN6 518 aa12.67□□□□□ -0.38
KNOP1-201ENST00000219837 RBM27Q9P2N5 1060 aaKnown RBP12.67□□□□□ -0.38
KNOP1-201ENST00000219837 CBX1P83916 185 aa12.67□□□□□ -0.38
KNOP1-201ENST00000219837 PAIP2Q9BPZ3 127 aaKnown RBP12.67□□□□□ -0.38
KNOP1-201ENST00000219837 FANCAO15360 1455 aa12.67□□□□□ -0.38
KNOP1-201ENST00000219837 TRIM27P14373 513 aa12.67□□□□□ -0.38
KNOP1-201ENST00000219837 NCBP1Q09161 790 aaKnown RBP12.67□□□□□ -0.38
KNOP1-201ENST00000219837 PPP4R3BQ5MIZ7 849 aa12.67□□□□□ -0.38
KNOP1-201ENST00000219837 AKNAD1Q5T1N1 836 aa12.67□□□□□ -0.38
KNOP1-201ENST00000219837 TTC22Q5TAA0 569 aa12.67□□□□□ -0.38
KNOP1-201ENST00000219837 SREK1Q8WXA9 508 aaKnown RBP12.67□□□□□ -0.38
KNOP1-201ENST00000219837 PPIP5K1Q6PFW1 1433 aa12.67□□□□□ -0.38
KNOP1-201ENST00000219837 HSF2BPO75031 334 aa12.67□□□□□ -0.38
KNOP1-201ENST00000219837 USP25Q9UHP3 1055 aa12.67□□□□□ -0.38
KNOP1-201ENST00000219837 FAM13AO94988 1023 aa12.66□□□□□ -0.38
KNOP1-201ENST00000219837 GSDMDP57764 484 aa12.66□□□□□ -0.38
KNOP1-201ENST00000219837 ALG1Q9BT22 464 aa12.66□□□□□ -0.38
KNOP1-201ENST00000219837 LRRC2Q9BYS8 371 aa12.66□□□□□ -0.38
KNOP1-201ENST00000219837 RRP36Q96EU6 259 aaKnown RBP12.66□□□□□ -0.38
KNOP1-201ENST00000219837 CNNM2Q9H8M5 875 aa12.66□□□□□ -0.38
KNOP1-201ENST00000219837 HMGXB3Q12766 1538 aa12.66□□□□□ -0.38
KNOP1-201ENST00000219837 GSTA5Q7RTV2 222 aa12.66□□□□□ -0.38
KNOP1-201ENST00000219837 C16orf45Q96MC5 204 aaPredicted RBP12.66□□□□□ -0.38
KNOP1-201ENST00000219837 NSD2O96028 1365 aa12.66□□□□□ -0.38
KNOP1-201ENST00000219837 ZBTB43O43298 467 aa12.66□□□□□ -0.38
KNOP1-201ENST00000219837 TNPO1Q92973 898 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms