RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 AOX1Q06278 1338 aa20.59■□□□□ 0.89
CHGA-201ENST00000216492 ERC2O15083 957 aa20.58■□□□□ 0.89
CHGA-201ENST00000216492 AACSQ86V21 672 aa20.58■□□□□ 0.89
CHGA-201ENST00000216492 EAF2Q96CJ1 260 aaPredicted RBP20.58■□□□□ 0.89
CHGA-201ENST00000216492 RTN4Q9NQC3 1192 aaKnown RBP20.58■□□□□ 0.89
CHGA-201ENST00000216492 UTP14AQ9BVJ6 771 aaKnown RBP20.58■□□□□ 0.88
CHGA-201ENST00000216492 RREB1Q92766 1687 aa20.58■□□□□ 0.88
CHGA-201ENST00000216492 FAM177BA6PVY3 158 aa20.57■□□□□ 0.88
CHGA-201ENST00000216492 ST18O60284 1047 aa20.57■□□□□ 0.88
CHGA-201ENST00000216492 SKOR2Q2VWA4 1001 aaPredicted RBP20.57■□□□□ 0.88
CHGA-201ENST00000216492 FBXO41Q8TF61 875 aa20.57■□□□□ 0.88
CHGA-201ENST00000216492 CCDC85AQ96PX6 553 aaPredicted RBP20.57■□□□□ 0.88
CHGA-201ENST00000216492 LRRC4BQ9NT99 713 aa20.57■□□□□ 0.88
CHGA-201ENST00000216492 FSD2A1L4K1 749 aa20.57■□□□□ 0.88
CHGA-201ENST00000216492 PDE8AO60658 829 aa20.57■□□□□ 0.88
CHGA-201ENST00000216492 TTLL11Q8NHH1 800 aa20.57■□□□□ 0.88
CHGA-201ENST00000216492 GZF1Q9H116 711 aaPredicted RBP20.57■□□□□ 0.88
CHGA-201ENST00000216492 FOXD4L1Q9NU39 408 aa20.57■□□□□ 0.88
CHGA-201ENST00000216492 EP400Q96L91 3159 aa20.56■□□□□ 0.88
CHGA-201ENST00000216492 TRIM6-TRIM34B2RNG4 842 aa20.56■□□□□ 0.88
CHGA-201ENST00000216492 TFCP2Q12800 502 aa20.56■□□□□ 0.88
CHGA-201ENST00000216492 IFIT5Q13325 482 aaKnown RBP20.56■□□□□ 0.88
CHGA-201ENST00000216492 PI4K2BQ8TCG2 481 aa20.56■□□□□ 0.88
CHGA-201ENST00000216492 ZNF594Q96JF6 807 aaPredicted RBP20.56■□□□□ 0.88
CHGA-201ENST00000216492 CCDC8Q9H0W5 538 aaPredicted RBP20.56■□□□□ 0.88
CHGA-201ENST00000216492 ISY1Q9ULR0 285 aaKnown RBP20.56■□□□□ 0.88
CHGA-201ENST00000216492 TTC41PQ6P2S7 1318 aa20.56■□□□□ 0.88
CHGA-201ENST00000216492 SH3TC1Q8TE82 1336 aa20.56■□□□□ 0.88
CHGA-201ENST00000216492 RILPL2Q969X0 211 aa20.55■□□□□ 0.88
CHGA-201ENST00000216492 NARFQ9UHQ1 456 aa20.55■□□□□ 0.88
CHGA-201ENST00000216492 COL5A3P25940 1745 aaPredicted RBP20.55■□□□□ 0.88
CHGA-201ENST00000216492 GOLGA6L22H0YM25 854 aa20.55■□□□□ 0.88
CHGA-201ENST00000216492 CTSWP56202 376 aa20.55■□□□□ 0.88
CHGA-201ENST00000216492 GPATCH3Q96I76 525 aa20.55■□□□□ 0.88
CHGA-201ENST00000216492 ECHDC1Q9NTX5 307 aa20.55■□□□□ 0.88
CHGA-201ENST00000216492 USP42Q9H9J4 1324 aaKnown RBP20.55■□□□□ 0.88
CHGA-201ENST00000216492 SBF2Q86WG5 1849 aa20.55■□□□□ 0.88
CHGA-201ENST00000216492 EYA2O00167 538 aa20.54■□□□□ 0.88
CHGA-201ENST00000216492 RGL2O15211 777 aa20.54■□□□□ 0.88
CHGA-201ENST00000216492 ZPR1O75312 459 aa20.54■□□□□ 0.88
CHGA-201ENST00000216492 IL15P40933 162 aaPredicted RBP20.54■□□□□ 0.88
CHGA-201ENST00000216492 SLC27A3Q5K4L6 730 aa20.54■□□□□ 0.88
CHGA-201ENST00000216492 USPL1Q5W0Q7 1092 aa20.54■□□□□ 0.88
CHGA-201ENST00000216492 ATG9AQ7Z3C6 839 aa20.54■□□□□ 0.88
CHGA-201ENST00000216492 ARHGEF1Q92888 912 aaKnown RBP20.54■□□□□ 0.88
CHGA-201ENST00000216492 AK7Q96M32 723 aa20.54■□□□□ 0.88
CHGA-201ENST00000216492 NUP98P52948 1817 aa20.54■□□□□ 0.88
CHGA-201ENST00000216492 GLRX3O76003 335 aaKnown RBP20.54■□□□□ 0.88
CHGA-201ENST00000216492 ANO8Q9HCE9 1232 aaPredicted RBP20.54■□□□□ 0.88
CHGA-201ENST00000216492 LRRC24Q50LG9 513 aa20.53■□□□□ 0.88
CHGA-201ENST00000216492 TNNI3KQ59H18 835 aa20.53■□□□□ 0.88
CHGA-201ENST00000216492 TAF7LQ5H9L4 462 aa20.53■□□□□ 0.88
CHGA-201ENST00000216492 TRAPPC3LQ5T215 181 aa20.53■□□□□ 0.88
CHGA-201ENST00000216492 RGS17Q9UGC6 210 aaPredicted RBP20.53■□□□□ 0.88
CHGA-201ENST00000216492 FPGT-TNNI3KV9GXZ4 949 aa20.53■□□□□ 0.88
CHGA-201ENST00000216492 CIAO1O76071 339 aa20.52■□□□□ 0.88
CHGA-201ENST00000216492 HCLS1P14317 486 aaPredicted RBP20.52■□□□□ 0.88
CHGA-201ENST00000216492 AMIGO3Q86WK7 504 aa20.52■□□□□ 0.88
CHGA-201ENST00000216492 GREM2Q9H772 168 aa20.52■□□□□ 0.88
CHGA-201ENST00000216492 NTSR2O95665 410 aa20.52■□□□□ 0.87
CHGA-201ENST00000216492 ITGA6P23229 1130 aa20.52■□□□□ 0.87
CHGA-201ENST00000216492 NUCB2P80303 420 aa20.52■□□□□ 0.87
CHGA-201ENST00000216492 CLEC17AQ6ZS10 378 aa20.52■□□□□ 0.87
CHGA-201ENST00000216492 PUS3Q9BZE2 481 aaKnown RBP20.52■□□□□ 0.87
CHGA-201ENST00000216492 BCL2L12Q9HB09 334 aa20.52■□□□□ 0.87
CHGA-201ENST00000216492 CWC22Q9HCG8 908 aaKnown RBP20.52■□□□□ 0.87
CHGA-201ENST00000216492 SRP68Q9UHB9 627 aaKnown RBP20.52■□□□□ 0.87
CHGA-201ENST00000216492 FBXO3Q9UK99 471 aa20.52■□□□□ 0.87
CHGA-201ENST00000216492 HSP90B1P14625 803 aaKnown RBP20.51■□□□□ 0.87
CHGA-201ENST00000216492 TLR7Q9NYK1 1049 aaKnown RBP20.51■□□□□ 0.87
CHGA-201ENST00000216492 ANKRD18BA2A2Z9 1011 aa20.5■□□□□ 0.87
CHGA-201ENST00000216492 PHF14O94880 888 aa20.5■□□□□ 0.87
CHGA-201ENST00000216492 MAP4K4O95819 1239 aaPredicted RBP20.5■□□□□ 0.87
CHGA-201ENST00000216492 RFC4P35249 363 aa20.5■□□□□ 0.87
CHGA-201ENST00000216492 MRE11P49959 708 aa20.5■□□□□ 0.87
CHGA-201ENST00000216492 TBC1D9BQ66K14 1250 aa20.5■□□□□ 0.87
CHGA-201ENST00000216492 BICDL1Q6ZP65 573 aa20.5■□□□□ 0.87
CHGA-201ENST00000216492 BRWD3Q6RI45 1802 aa20.5■□□□□ 0.87
CHGA-201ENST00000216492 MCCP23508 829 aa20.5■□□□□ 0.87
CHGA-201ENST00000216492 FAM43AQ8N2R8 423 aa20.5■□□□□ 0.87
CHGA-201ENST00000216492 XRCC6P12956 609 aaKnown RBP eCLIP20.49■□□□□ 0.87
CHGA-201ENST00000216492 SSFA2P28290 1259 aa20.49■□□□□ 0.87
CHGA-201ENST00000216492 POTEAQ6S8J7 498 aa20.49■□□□□ 0.87
CHGA-201ENST00000216492 LDHAL6AQ6ZMR3 332 aa20.49■□□□□ 0.87
CHGA-201ENST00000216492 CNTROBQ8N137 903 aa20.49■□□□□ 0.87
CHGA-201ENST00000216492 PROM2Q8N271 834 aa20.49■□□□□ 0.87
CHGA-201ENST00000216492 SETDB2Q96T68 719 aa20.49■□□□□ 0.87
CHGA-201ENST00000216492 CEP126Q9P2H0 1117 aa20.49■□□□□ 0.87
CHGA-201ENST00000216492 LY75O60449 1722 aa20.48■□□□□ 0.87
CHGA-201ENST00000216492 TXNRD1Q16881 649 aa20.48■□□□□ 0.87
CHGA-201ENST00000216492 GPR108Q9NPR9 543 aa20.48■□□□□ 0.87
CHGA-201ENST00000216492 DBNLQ9UJU6 430 aaKnown RBP20.48■□□□□ 0.87
CHGA-201ENST00000216492 ANKRD36CQ5JPF3 1778 aa20.48■□□□□ 0.87
CHGA-201ENST00000216492 TUBGCP6Q96RT7 1819 aa20.48■□□□□ 0.87
CHGA-201ENST00000216492 ESYT1Q9BSJ8 1104 aa20.47■□□□□ 0.87
CHGA-201ENST00000216492 APBA3O96018 575 aa20.47■□□□□ 0.87
CHGA-201ENST00000216492 CHMLP26374 656 aa20.47■□□□□ 0.87
CHGA-201ENST00000216492 HMGB2P26583 209 aaKnown RBP20.47■□□□□ 0.87
CHGA-201ENST00000216492 GTF2E1P29083 439 aaPredicted RBP20.47■□□□□ 0.87
CHGA-201ENST00000216492 TIMM10P62072 90 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms