RNA–Protein interactions for RNA: ENST00000215917.11

SRRD-201, Transcript of SRR1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRD, Length 4,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRD-201ENST00000215917 ZKSCAN1P17029 563 aaPredicted RBP17.71■□□□□ 0.43
SRRD-201ENST00000215917 SDF4Q9BRK5 362 aa17.71■□□□□ 0.43
SRRD-201ENST00000215917 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.71■□□□□ 0.43
SRRD-201ENST00000215917 LMTK3Q96Q04 1460 aa17.71■□□□□ 0.43
SRRD-201ENST00000215917 KAT6BQ8WYB5 2073 aa17.71■□□□□ 0.43
SRRD-201ENST00000215917 SGSM2O43147 1006 aa17.71■□□□□ 0.43
SRRD-201ENST00000215917 ALDH1L1O75891 902 aa17.71■□□□□ 0.43
SRRD-201ENST00000215917 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.71■□□□□ 0.43
SRRD-201ENST00000215917 POLR3GO15318 223 aaPredicted RBP17.7■□□□□ 0.42
SRRD-201ENST00000215917 IL2RBP14784 551 aa17.7■□□□□ 0.42
SRRD-201ENST00000215917 PDE4CQ08493 712 aa17.7■□□□□ 0.42
SRRD-201ENST00000215917 FAM227BQ96M60 508 aa17.7■□□□□ 0.42
SRRD-201ENST00000215917 DNAJC2Q99543 621 aaKnown RBP17.7■□□□□ 0.42
SRRD-201ENST00000215917 BTG4Q9NY30 223 aa17.7■□□□□ 0.42
SRRD-201ENST00000215917 HEG1Q9ULI3 1381 aa17.7■□□□□ 0.42
SRRD-201ENST00000215917 PTH1RQ03431 593 aa17.7■□□□□ 0.42
SRRD-201ENST00000215917 EPHA10Q5JZY3 1008 aa17.7■□□□□ 0.42
SRRD-201ENST00000215917 KAZALD1Q96I82 304 aa17.7■□□□□ 0.42
SRRD-201ENST00000215917 SNX14Q9Y5W7 946 aa17.7■□□□□ 0.42
SRRD-201ENST00000215917 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.7■□□□□ 0.42
SRRD-201ENST00000215917 SOS2Q07890 1332 aaPredicted RBP17.7■□□□□ 0.42
SRRD-201ENST00000215917 PHRF1Q9P1Y6 1649 aaKnown RBP17.7■□□□□ 0.42
SRRD-201ENST00000215917 MCM2P49736 904 aa17.69■□□□□ 0.42
SRRD-201ENST00000215917 MNS1Q8NEH6 495 aa17.69■□□□□ 0.42
SRRD-201ENST00000215917 RUFY2Q8WXA3 655 aa17.69■□□□□ 0.42
SRRD-201ENST00000215917 ZBTB3Q9H5J0 574 aa17.69■□□□□ 0.42
SRRD-201ENST00000215917 AK2P54819 239 aa17.69■□□□□ 0.42
SRRD-201ENST00000215917 NOLC1Q14978 699 aaKnown RBP eCLIP17.69■□□□□ 0.42
SRRD-201ENST00000215917 SYTL4Q96C24 671 aaPredicted RBP17.69■□□□□ 0.42
SRRD-201ENST00000215917 CCDC85AQ96PX6 553 aaPredicted RBP17.69■□□□□ 0.42
SRRD-201ENST00000215917 KDM3BQ7LBC6 1761 aa17.69■□□□□ 0.42
SRRD-201ENST00000215917 PXDNLA1KZ92 1463 aa17.69■□□□□ 0.42
SRRD-201ENST00000215917 NEURL1BA8MQ27 555 aa17.69■□□□□ 0.42
SRRD-201ENST00000215917 GPT2Q8TD30 523 aa17.69■□□□□ 0.42
SRRD-201ENST00000215917 EAF2Q96CJ1 260 aaPredicted RBP17.69■□□□□ 0.42
SRRD-201ENST00000215917 DDX11Q96FC9 970 aa17.69■□□□□ 0.42
SRRD-201ENST00000215917 SMC2O95347 1197 aa17.69■□□□□ 0.42
SRRD-201ENST00000215917 NECAB1Q8N987 351 aa17.69■□□□□ 0.42
SRRD-201ENST00000215917 NEUROD6Q96NK8 337 aa17.68■□□□□ 0.42
SRRD-201ENST00000215917 CAMTA1Q9Y6Y1 1673 aa17.68■□□□□ 0.42
SRRD-201ENST00000215917 DYNC1I1O14576 645 aa17.68■□□□□ 0.42
SRRD-201ENST00000215917 GCKRQ14397 625 aa17.68■□□□□ 0.42
SRRD-201ENST00000215917 TTLL7Q6ZT98 887 aa17.68■□□□□ 0.42
SRRD-201ENST00000215917 U2AF2P26368 475 aaKnown RBP eCLIP17.67■□□□□ 0.42
SRRD-201ENST00000215917 HSPA4P34932 840 aa17.67■□□□□ 0.42
SRRD-201ENST00000215917 PDILTQ8N807 584 aa17.67■□□□□ 0.42
SRRD-201ENST00000215917 TNMDQ9H2S6 317 aa17.67■□□□□ 0.42
SRRD-201ENST00000215917 PCDH11XQ9BZA7 1347 aa17.67■□□□□ 0.42
SRRD-201ENST00000215917 PCDH11YQ9BZA8 1340 aa17.67■□□□□ 0.42
SRRD-201ENST00000215917 A0A087WZG4 1122 aa17.67■□□□□ 0.42
SRRD-201ENST00000215917 ADCK5Q3MIX3 580 aa17.67■□□□□ 0.42
SRRD-201ENST00000215917 METTL22Q9BUU2 404 aaPredicted RBP17.67■□□□□ 0.42
SRRD-201ENST00000215917 CPDO75976 1380 aa17.67■□□□□ 0.42
SRRD-201ENST00000215917 LARP1BQ659C4 914 aaKnown RBP17.66■□□□□ 0.42
SRRD-201ENST00000215917 TOMM22Q9NS69 142 aa17.66■□□□□ 0.42
SRRD-201ENST00000215917 HDAC5Q9UQL6 1122 aa17.66■□□□□ 0.42
SRRD-201ENST00000215917 ERC1Q8IUD2 1116 aa17.66■□□□□ 0.42
SRRD-201ENST00000215917 TMEM63CQ9P1W3 806 aa17.66■□□□□ 0.42
SRRD-201ENST00000215917 CNPY2Q9Y2B0 182 aa17.66■□□□□ 0.42
SRRD-201ENST00000215917 RAD50Q92878 1312 aa17.66■□□□□ 0.42
SRRD-201ENST00000215917 CCDC192P0DO97 292 aa17.66■□□□□ 0.42
SRRD-201ENST00000215917 ANAPC15P60006 121 aa17.66■□□□□ 0.42
SRRD-201ENST00000215917 WDR33Q9C0J8 1336 aaKnown RBP17.66■□□□□ 0.42
SRRD-201ENST00000215917 NMIQ13287 307 aaPredicted RBP17.65■□□□□ 0.42
SRRD-201ENST00000215917 PDRG1Q9NUG6 133 aa17.65■□□□□ 0.42
SRRD-201ENST00000215917 NBPF26B4DH59 902 aa17.65■□□□□ 0.42
SRRD-201ENST00000215917 SASH1O94885 1247 aa17.65■□□□□ 0.42
SRRD-201ENST00000215917 ADAMTS2O95450 1211 aa17.65■□□□□ 0.42
SRRD-201ENST00000215917 ATP2B1P20020 1258 aa17.65■□□□□ 0.42
SRRD-201ENST00000215917 NBPF14Q5TI25 921 aa17.65■□□□□ 0.42
SRRD-201ENST00000215917 NBPF10Q6P3W6 841 aaKnown RBP17.65■□□□□ 0.42
SRRD-201ENST00000215917 LRSAM1Q6UWE0 723 aa17.65■□□□□ 0.42
SRRD-201ENST00000215917 NBPF15Q8N660 670 aa17.65■□□□□ 0.42
SRRD-201ENST00000215917 CACNA1FO60840 1977 aa17.65■□□□□ 0.42
SRRD-201ENST00000215917 GADD45BO75293 160 aaPredicted RBP17.65■□□□□ 0.42
SRRD-201ENST00000215917 CYP2E1P05181 493 aaPredicted RBP17.65■□□□□ 0.42
SRRD-201ENST00000215917 TNNT1P13805 278 aa17.65■□□□□ 0.42
SRRD-201ENST00000215917 LSG1Q9H089 658 aaKnown RBP17.65■□□□□ 0.42
SRRD-201ENST00000215917 LARGE1O95461 756 aa17.64■□□□□ 0.41
SRRD-201ENST00000215917 CHGBP05060 677 aa17.64■□□□□ 0.41
SRRD-201ENST00000215917 OVOS2A0A0G2JMS6 1433 aa17.64■□□□□ 0.41
SRRD-201ENST00000215917 CARD10Q9BWT7 1032 aa17.63■□□□□ 0.41
SRRD-201ENST00000215917 RBM8AQ9Y5S9 174 aaKnown RBP17.63■□□□□ 0.41
SRRD-201ENST00000215917 CYP46A1Q9Y6A2 500 aa17.63■□□□□ 0.41
SRRD-201ENST00000215917 GTF2F1P35269 517 aaKnown RBP eCLIP17.63■□□□□ 0.41
SRRD-201ENST00000215917 USP48Q86UV5 1035 aa17.63■□□□□ 0.41
SRRD-201ENST00000215917 LIMCH1Q9UPQ0 1083 aa17.63■□□□□ 0.41
SRRD-201ENST00000215917 TMOD3Q9NYL9 352 aa17.63■□□□□ 0.41
SRRD-201ENST00000215917 ASAP1Q9ULH1 1129 aa17.63■□□□□ 0.41
SRRD-201ENST00000215917 BRD1O95696 1058 aa17.62■□□□□ 0.41
SRRD-201ENST00000215917 IBSPP21815 317 aaPredicted RBP17.62■□□□□ 0.41
SRRD-201ENST00000215917 RUFY3Q7L099 469 aa17.62■□□□□ 0.41
SRRD-201ENST00000215917 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.62■□□□□ 0.41
SRRD-201ENST00000215917 COL18A1P39060 1754 aa17.62■□□□□ 0.41
SRRD-201ENST00000215917 GUCY1B3Q02153 619 aa17.62■□□□□ 0.41
SRRD-201ENST00000215917 FAM173BQ6P4H8 233 aa17.62■□□□□ 0.41
SRRD-201ENST00000215917 CCDC73Q6ZRK6 1079 aa17.62■□□□□ 0.41
SRRD-201ENST00000215917 EVI5LQ96CN4 794 aa17.62■□□□□ 0.41
SRRD-201ENST00000215917 COL5A2P05997 1499 aaPredicted RBP17.61■□□□□ 0.41
SRRD-201ENST00000215917 TPM4P67936 248 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms