RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 RTL9Q8NET4 1388 aa22.15■■□□□ 1.14
MRPL28-201ENST00000199706 H7C1W4 665 aa22.15■■□□□ 1.14
MRPL28-201ENST00000199706 FKBP4Q02790 459 aaKnown RBP eCLIP22.15■■□□□ 1.14
MRPL28-201ENST00000199706 CWF19L2Q2TBE0 894 aaKnown RBP22.15■■□□□ 1.14
MRPL28-201ENST00000199706 ATP6V0A2Q9Y487 856 aa22.15■■□□□ 1.14
MRPL28-201ENST00000199706 PRELPP51888 382 aa22.14■■□□□ 1.13
MRPL28-201ENST00000199706 BEND3Q5T5X7 828 aa22.14■■□□□ 1.13
MRPL28-201ENST00000199706 PLA2G12BQ9BX93 195 aa22.14■■□□□ 1.13
MRPL28-201ENST00000199706 ALDH1L1O75891 902 aa22.13■■□□□ 1.13
MRPL28-201ENST00000199706 CCDC152Q4G0S7 254 aa22.13■■□□□ 1.13
MRPL28-201ENST00000199706 TAF1P21675 1872 aa22.12■■□□□ 1.13
MRPL28-201ENST00000199706 CASP7P55210 303 aa22.12■■□□□ 1.13
MRPL28-201ENST00000199706 SP8Q8IXZ3 490 aa22.12■■□□□ 1.13
MRPL28-201ENST00000199706 TMX4Q9H1E5 349 aaPredicted RBP22.12■■□□□ 1.13
MRPL28-201ENST00000199706 ZNF219Q9P2Y4 722 aaPredicted RBP22.12■■□□□ 1.13
MRPL28-201ENST00000199706 F6X3S4 739 aa22.11■■□□□ 1.13
MRPL28-201ENST00000199706 CTSWP56202 376 aa22.11■■□□□ 1.13
MRPL28-201ENST00000199706 RTL5Q5HYW3 569 aaPredicted RBP22.11■■□□□ 1.13
MRPL28-201ENST00000199706 VPS33BQ9H267 617 aa22.11■■□□□ 1.13
MRPL28-201ENST00000199706 LTBP1Q14766 1721 aa22.1■■□□□ 1.13
MRPL28-201ENST00000199706 UBE3BQ7Z3V4 1068 aa22.1■■□□□ 1.13
MRPL28-201ENST00000199706 SMC4Q9NTJ3 1288 aa22.1■■□□□ 1.13
MRPL28-201ENST00000199706 RTFDC1Q9BY42 306 aaPredicted RBP22.09■■□□□ 1.13
MRPL28-201ENST00000199706 GPBP1L1Q9HC44 474 aaPredicted RBP22.09■■□□□ 1.13
MRPL28-201ENST00000199706 KDM2BQ8NHM5 1336 aa22.08■■□□□ 1.13
MRPL28-201ENST00000199706 OLFM4Q6UX06 510 aa22.08■■□□□ 1.13
MRPL28-201ENST00000199706 SRCIN1Q9C0H9 1055 aa22.08■■□□□ 1.13
MRPL28-201ENST00000199706 KIF16BQ96L93 1317 aa22.07■■□□□ 1.12
MRPL28-201ENST00000199706 GRM8O00222 908 aa22.07■■□□□ 1.12
MRPL28-201ENST00000199706 RARSP54136 660 aaKnown RBP22.07■■□□□ 1.12
MRPL28-201ENST00000199706 SUPT20HQ8NEM7 779 aa22.07■■□□□ 1.12
MRPL28-201ENST00000199706 TTLL11Q8NHH1 800 aa22.07■■□□□ 1.12
MRPL28-201ENST00000199706 DUOX1Q9NRD9 1551 aa22.07■■□□□ 1.12
MRPL28-201ENST00000199706 COL4A1P02462 1669 aa22.07■■□□□ 1.12
MRPL28-201ENST00000199706 UTYO14607 1347 aa22.06■■□□□ 1.12
MRPL28-201ENST00000199706 IARSP41252 1262 aaKnown RBP22.06■■□□□ 1.12
MRPL28-201ENST00000199706 RPS8P62241 208 aaKnown RBP22.06■■□□□ 1.12
MRPL28-201ENST00000199706 ARHGAP45Q92619 1136 aa22.06■■□□□ 1.12
MRPL28-201ENST00000199706 CELF1Q92879 486 aaKnown RBP22.06■■□□□ 1.12
MRPL28-201ENST00000199706 WDR90Q96KV7 1748 aa22.06■■□□□ 1.12
MRPL28-201ENST00000199706 CSF1RP07333 972 aa22.05■■□□□ 1.12
MRPL28-201ENST00000199706 CDC5LQ99459 802 aaKnown RBP22.05■■□□□ 1.12
MRPL28-201ENST00000199706 GLTPD2A6NH11 291 aa22.04■■□□□ 1.12
MRPL28-201ENST00000199706 SLC4A10Q6U841 1118 aa22.04■■□□□ 1.12
MRPL28-201ENST00000199706 BCL2L13Q9BXK5 485 aa22.04■■□□□ 1.12
MRPL28-201ENST00000199706 ZNF277Q9NRM2 450 aaPredicted RBP22.04■■□□□ 1.12
MRPL28-201ENST00000199706 DPP8Q6V1X1 898 aaPredicted RBP22.03■■□□□ 1.12
MRPL28-201ENST00000199706 MPNDQ8N594 471 aa22.03■■□□□ 1.12
MRPL28-201ENST00000199706 JARID2Q92833 1246 aaPredicted RBP22.03■■□□□ 1.12
MRPL28-201ENST00000199706 API5Q9BZZ5 524 aaKnown RBP22.03■■□□□ 1.12
MRPL28-201ENST00000199706 SEC31BQ9NQW1 1179 aa22.02■■□□□ 1.12
MRPL28-201ENST00000199706 PODXL2Q9NZ53 605 aa22.02■■□□□ 1.12
MRPL28-201ENST00000199706 C9orf78Q9NZ63 289 aaPredicted RBP22.02■■□□□ 1.12
MRPL28-201ENST00000199706 DPY19L2Q6NUT2 758 aa22.01■■□□□ 1.11
MRPL28-201ENST00000199706 ANKRD18AQ8IVF6 992 aa22.01■■□□□ 1.11
MRPL28-201ENST00000199706 GREM2Q9H772 168 aa22.01■■□□□ 1.11
MRPL28-201ENST00000199706 COL4A5P29400 1685 aa22.01■■□□□ 1.11
MRPL28-201ENST00000199706 FZD9O00144 591 aa22■■□□□ 1.11
MRPL28-201ENST00000199706 CCT4P50991 539 aaKnown RBP22■■□□□ 1.11
MRPL28-201ENST00000199706 JDP2Q8WYK2 163 aa22■■□□□ 1.11
MRPL28-201ENST00000199706 SPEF2Q9C093 1822 aa21.99■■□□□ 1.11
MRPL28-201ENST00000199706 FOXO4P98177 505 aa21.99■■□□□ 1.11
MRPL28-201ENST00000199706 KIAA2012Q0VF49 1180 aa21.99■■□□□ 1.11
MRPL28-201ENST00000199706 BSDC1Q9NW68 430 aaPredicted RBP21.99■■□□□ 1.11
MRPL28-201ENST00000199706 NOB1Q9ULX3 412 aaKnown RBP21.99■■□□□ 1.11
MRPL28-201ENST00000199706 SCN4AP35499 1836 aa21.99■■□□□ 1.11
MRPL28-201ENST00000199706 KIF3CO14782 793 aa21.98■■□□□ 1.11
MRPL28-201ENST00000199706 IPO8O15397 1037 aaKnown RBP21.98■■□□□ 1.11
MRPL28-201ENST00000199706 SLC51AQ86UW1 340 aa21.98■■□□□ 1.11
MRPL28-201ENST00000199706 ZNF526Q8TF50 670 aaPredicted RBP21.98■■□□□ 1.11
MRPL28-201ENST00000199706 L3MBTL3Q96JM7 780 aaPredicted RBP21.98■■□□□ 1.11
MRPL28-201ENST00000199706 ITGA6P23229 1130 aa21.97■■□□□ 1.11
MRPL28-201ENST00000199706 FAM161AQ3B820 660 aa21.97■■□□□ 1.11
MRPL28-201ENST00000199706 LARGE2Q8N3Y3 721 aa21.97■■□□□ 1.11
MRPL28-201ENST00000199706 PPIP5K2O43314 1243 aa21.96■■□□□ 1.11
MRPL28-201ENST00000199706 RABL6Q3YEC7 729 aaPredicted RBP21.96■■□□□ 1.11
MRPL28-201ENST00000199706 NMRK2Q9NPI5 230 aa21.96■■□□□ 1.11
MRPL28-201ENST00000199706 XDHP47989 1333 aa21.96■■□□□ 1.11
MRPL28-201ENST00000199706 NBPF7P0C2Y1 421 aaPredicted RBP21.95■■□□□ 1.1
MRPL28-201ENST00000199706 IGHMBP2P38935 993 aaKnown RBP21.95■■□□□ 1.1
MRPL28-201ENST00000199706 GPSM2P81274 684 aa21.95■■□□□ 1.1
MRPL28-201ENST00000199706 NIM1KQ8IY84 436 aa21.95■■□□□ 1.1
MRPL28-201ENST00000199706 CCDC85AQ96PX6 553 aaPredicted RBP21.95■■□□□ 1.1
MRPL28-201ENST00000199706 EYA3Q99504 573 aa21.95■■□□□ 1.1
MRPL28-201ENST00000199706 USP44Q9H0E7 712 aa21.95■■□□□ 1.1
MRPL28-201ENST00000199706 NSFL1CQ9UNZ2 370 aaKnown RBP21.95■■□□□ 1.1
MRPL28-201ENST00000199706 A0A1B0GUL6 1792 aa21.94■■□□□ 1.1
MRPL28-201ENST00000199706 ANKRD18BA2A2Z9 1011 aa21.94■■□□□ 1.1
MRPL28-201ENST00000199706 VEGFAP15692 232 aaPredicted RBP21.94■■□□□ 1.1
MRPL28-201ENST00000199706 IFIT5Q13325 482 aaKnown RBP21.94■■□□□ 1.1
MRPL28-201ENST00000199706 INTS3Q68E01 1043 aaKnown RBP21.94■■□□□ 1.1
MRPL28-201ENST00000199706 GPC2Q8N158 579 aa21.94■■□□□ 1.1
MRPL28-201ENST00000199706 TBC1D16Q8TBP0 767 aa21.94■■□□□ 1.1
MRPL28-201ENST00000199706 KAZALD1Q96I82 304 aa21.94■■□□□ 1.1
MRPL28-201ENST00000199706 AOC3Q16853 763 aa21.93■■□□□ 1.1
MRPL28-201ENST00000199706 EPHA10Q5JZY3 1008 aa21.93■■□□□ 1.1
MRPL28-201ENST00000199706 LMBR1LQ6UX01 489 aa21.93■■□□□ 1.1
MRPL28-201ENST00000199706 ATF7IPQ6VMQ6 1270 aa21.93■■□□□ 1.1
MRPL28-201ENST00000199706 ZNF541Q9H0D2 1346 aa21.93■■□□□ 1.1
MRPL28-201ENST00000199706 POLLQ9UGP5 575 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms