RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 MPNDQ8N594 471 aa20.61■□□□□ 0.89
ERCC1-201ENST00000013807 ZNRF3Q9ULT6 936 aa20.61■□□□□ 0.89
ERCC1-201ENST00000013807 DUOX1Q9NRD9 1551 aa20.6■□□□□ 0.89
ERCC1-201ENST00000013807 HSPA1AP0DMV8 641 aaKnown RBP20.6■□□□□ 0.89
ERCC1-201ENST00000013807 HSPA1BP0DMV9 641 aaKnown RBP20.6■□□□□ 0.89
ERCC1-201ENST00000013807 AOC3Q16853 763 aa20.6■□□□□ 0.89
ERCC1-201ENST00000013807 DPP8Q6V1X1 898 aaPredicted RBP20.6■□□□□ 0.89
ERCC1-201ENST00000013807 USP50Q70EL3 339 aaPredicted RBP20.6■□□□□ 0.89
ERCC1-201ENST00000013807 CHMP4AQ9BY43 222 aa20.6■□□□□ 0.89
ERCC1-201ENST00000013807 CLEC11AQ9Y240 323 aa20.6■□□□□ 0.89
ERCC1-201ENST00000013807 GJA3Q9Y6H8 435 aa20.6■□□□□ 0.89
ERCC1-201ENST00000013807 LMOD1P29536 600 aaPredicted RBP20.59■□□□□ 0.89
ERCC1-201ENST00000013807 EPS15P42566 896 aa20.59■□□□□ 0.89
ERCC1-201ENST00000013807 CXCL9Q07325 125 aa20.59■□□□□ 0.89
ERCC1-201ENST00000013807 MAP1SQ66K74 1059 aaPredicted RBP20.59■□□□□ 0.89
ERCC1-201ENST00000013807 FAM89AQ96GI7 184 aa20.59■□□□□ 0.89
ERCC1-201ENST00000013807 CACNA1FO60840 1977 aa20.59■□□□□ 0.89
ERCC1-201ENST00000013807 CDHR2Q9BYE9 1310 aa20.58■□□□□ 0.89
ERCC1-201ENST00000013807 MKRN1Q9UHC7 482 aaKnown RBP20.58■□□□□ 0.89
ERCC1-201ENST00000013807 ATP5J2-PTCD1G3V325 749 aa20.57■□□□□ 0.88
ERCC1-201ENST00000013807 NCBP3Q53F19 620 aaKnown RBP20.57■□□□□ 0.88
ERCC1-201ENST00000013807 GPRC5DQ9NZD1 345 aa20.57■□□□□ 0.88
ERCC1-201ENST00000013807 RASSF10A6NK89 507 aa20.56■□□□□ 0.88
ERCC1-201ENST00000013807 CCDC27Q2M243 656 aa20.56■□□□□ 0.88
ERCC1-201ENST00000013807 ZBTB38Q8NAP3 1195 aaPredicted RBP20.56■□□□□ 0.88
ERCC1-201ENST00000013807 ADARB2Q9NS39 739 aaKnown RBP20.56■□□□□ 0.88
ERCC1-201ENST00000013807 C8orf58Q8NAV2 365 aa20.55■□□□□ 0.88
ERCC1-201ENST00000013807 PHAXQ9H814 394 aaKnown RBP20.55■□□□□ 0.88
ERCC1-201ENST00000013807 PGAP2Q9UHJ9 254 aa20.55■□□□□ 0.88
ERCC1-201ENST00000013807 HSP90B1P14625 803 aaKnown RBP20.54■□□□□ 0.88
ERCC1-201ENST00000013807 GOLGA2Q08379 1002 aa20.54■□□□□ 0.88
ERCC1-201ENST00000013807 RIC3Q7Z5B4 369 aa20.54■□□□□ 0.88
ERCC1-201ENST00000013807 CCDC191Q8NCU4 936 aa20.54■□□□□ 0.88
ERCC1-201ENST00000013807 CELF1Q92879 486 aaKnown RBP20.54■□□□□ 0.88
ERCC1-201ENST00000013807 COL4A1P02462 1669 aa20.54■□□□□ 0.88
ERCC1-201ENST00000013807 MYH3P11055 1940 aa20.53■□□□□ 0.88
ERCC1-201ENST00000013807 IRS4O14654 1257 aaPredicted RBP20.53■□□□□ 0.88
ERCC1-201ENST00000013807 VEGFBP49765 207 aa20.53■□□□□ 0.88
ERCC1-201ENST00000013807 TNIP1Q15025 636 aa20.53■□□□□ 0.88
ERCC1-201ENST00000013807 CCDC30Q5VVM6 783 aa20.53■□□□□ 0.88
ERCC1-201ENST00000013807 CIAPIN1Q6FI81 312 aa20.53■□□□□ 0.88
ERCC1-201ENST00000013807 POLR2AP24928 1970 aaKnown RBP20.53■□□□□ 0.88
ERCC1-201ENST00000013807 ELL2O00472 640 aaPredicted RBP20.52■□□□□ 0.88
ERCC1-201ENST00000013807 RPS8P62241 208 aaKnown RBP20.52■□□□□ 0.88
ERCC1-201ENST00000013807 DEFB115Q30KQ5 88 aa20.52■□□□□ 0.88
ERCC1-201ENST00000013807 YDJCA8MPS7 323 aa20.51■□□□□ 0.87
ERCC1-201ENST00000013807 PCCAP05165 728 aaPredicted RBP20.51■□□□□ 0.87
ERCC1-201ENST00000013807 CCDC184Q52MB2 194 aa20.51■□□□□ 0.87
ERCC1-201ENST00000013807 ZC3H15Q8WU90 426 aaKnown RBP20.51■□□□□ 0.87
ERCC1-201ENST00000013807 METTL22Q9BUU2 404 aaPredicted RBP20.51■□□□□ 0.87
ERCC1-201ENST00000013807 GMPSP49915 693 aaPredicted RBP20.5■□□□□ 0.87
ERCC1-201ENST00000013807 WASHC4Q2M389 1173 aa20.5■□□□□ 0.87
ERCC1-201ENST00000013807 PODXL2Q9NZ53 605 aa20.5■□□□□ 0.87
ERCC1-201ENST00000013807 NSFL1CQ9UNZ2 370 aaKnown RBP20.5■□□□□ 0.87
ERCC1-201ENST00000013807 PSME4Q14997 1843 aa20.5■□□□□ 0.87
ERCC1-201ENST00000013807 THSD7BQ9C0I4 1608 aa20.49■□□□□ 0.87
ERCC1-201ENST00000013807 SCN9AQ15858 1988 aa20.49■□□□□ 0.87
ERCC1-201ENST00000013807 DDX58O95786 925 aaKnown RBP20.49■□□□□ 0.87
ERCC1-201ENST00000013807 CST9Q5W186 159 aa20.49■□□□□ 0.87
ERCC1-201ENST00000013807 TSPYL6Q8N831 410 aa20.49■□□□□ 0.87
ERCC1-201ENST00000013807 DPF2Q92785 391 aa20.49■□□□□ 0.87
ERCC1-201ENST00000013807 ZNF428Q96B54 188 aa20.49■□□□□ 0.87
ERCC1-201ENST00000013807 WBP1LQ9NX94 342 aa20.49■□□□□ 0.87
ERCC1-201ENST00000013807 POLLQ9UGP5 575 aa20.49■□□□□ 0.87
ERCC1-201ENST00000013807 RAD17O75943 681 aa20.48■□□□□ 0.87
ERCC1-201ENST00000013807 RTL5Q5HYW3 569 aaPredicted RBP20.48■□□□□ 0.87
ERCC1-201ENST00000013807 WWC1Q8IX03 1113 aa20.48■□□□□ 0.87
ERCC1-201ENST00000013807 MYD88Q99836 296 aa20.48■□□□□ 0.87
ERCC1-201ENST00000013807 CWC25Q9NXE8 425 aaPredicted RBP20.48■□□□□ 0.87
ERCC1-201ENST00000013807 IL16Q14005 1332 aa20.48■□□□□ 0.87
ERCC1-201ENST00000013807 PDE8AO60658 829 aa20.47■□□□□ 0.87
ERCC1-201ENST00000013807 GPSM2P81274 684 aa20.47■□□□□ 0.87
ERCC1-201ENST00000013807 KSR2Q6VAB6 950 aa20.47■□□□□ 0.87
ERCC1-201ENST00000013807 TNS4Q8IZW8 715 aa20.47■□□□□ 0.87
ERCC1-201ENST00000013807 FOXN1O15353 648 aa20.46■□□□□ 0.87
ERCC1-201ENST00000013807 HIRAP54198 1017 aaPredicted RBP20.46■□□□□ 0.87
ERCC1-201ENST00000013807 TBC1D16Q8TBP0 767 aa20.46■□□□□ 0.87
ERCC1-201ENST00000013807 EYA3Q99504 573 aa20.46■□□□□ 0.87
ERCC1-201ENST00000013807 PRDM10Q9NQV6 1147 aa20.46■□□□□ 0.87
ERCC1-201ENST00000013807 CNOT7Q9UIV1 285 aaKnown RBP20.46■□□□□ 0.87
ERCC1-201ENST00000013807 WDR33Q9C0J8 1336 aaKnown RBP20.46■□□□□ 0.87
ERCC1-201ENST00000013807 FMR1Q06787 632 aaKnown RBP eCLIP20.45■□□□□ 0.86
ERCC1-201ENST00000013807 CCDC152Q4G0S7 254 aa20.45■□□□□ 0.86
ERCC1-201ENST00000013807 BCL2L13Q9BXK5 485 aa20.45■□□□□ 0.86
ERCC1-201ENST00000013807 C6orf229H3BNL8 230 aa20.44■□□□□ 0.86
ERCC1-201ENST00000013807 TRAF5O00463 557 aa20.44■□□□□ 0.86
ERCC1-201ENST00000013807 RPS12P25398 132 aaKnown RBP20.44■□□□□ 0.86
ERCC1-201ENST00000013807 ZEB1P37275 1124 aaPredicted RBP20.44■□□□□ 0.86
ERCC1-201ENST00000013807 HHIPL1Q96JK4 782 aa20.44■□□□□ 0.86
ERCC1-201ENST00000013807 SEC31BQ9NQW1 1179 aa20.44■□□□□ 0.86
ERCC1-201ENST00000013807 ABT1Q9ULW3 272 aaKnown RBP20.44■□□□□ 0.86
ERCC1-201ENST00000013807 MAP3K2Q9Y2U5 619 aa20.44■□□□□ 0.86
ERCC1-201ENST00000013807 TLL2Q9Y6L7 1015 aa20.44■□□□□ 0.86
ERCC1-201ENST00000013807 PI4KAP2A4QPH2 592 aa20.43■□□□□ 0.86
ERCC1-201ENST00000013807 H7C1D1 291 aa20.43■□□□□ 0.86
ERCC1-201ENST00000013807 PSMD14O00487 310 aa20.43■□□□□ 0.86
ERCC1-201ENST00000013807 IGKV5-2P06315 115 aa20.43■□□□□ 0.86
ERCC1-201ENST00000013807 PI4KAP1Q8N8J0 262 aa20.43■□□□□ 0.86
ERCC1-201ENST00000013807 TSR2Q969E8 191 aaKnown RBP20.43■□□□□ 0.86
ERCC1-201ENST00000013807 DBNDD1Q9H9R9 158 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms