RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Ncapd2Q8K2Z4 1392 aa15.49■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Fam184aE9PW83 1143 aa15.49■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Dctn1O08788 1281 aa15.49■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Esyt1Q3U7R1 1092 aaKnown RBP15.49■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Gm21985Q6P6P5 1106 aa15.49■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Nek11Q8C0Q4 628 aa15.49■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Tecpr2Q3UH45 1423 aa15.49■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Iqsec2Q5DU25 1478 aa15.49■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Hmg20bQ9Z104 317 aa15.48■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 U2af1l4Q8BGJ9 220 aa15.48■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Zkscan8Q8BSL0 588 aa15.48■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Tmem143Q8VD26 458 aa15.48■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 TnksQ6PFX9 1320 aa15.48■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Atp7bQ64446 1462 aa15.48■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Igsf1Q7TQA1 1317 aa15.48■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Cnot6lQ8VEG6 555 aa15.48■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 CpvlQ9D3S9 478 aa15.48■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Pus3Q9JI38 481 aa15.48■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Wdr33Q8K4P0 1330 aaKnown RBP15.48■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Hap1O35668 628 aa15.48■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Prl7a2O54831 253 aa15.48■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Casp1P29452 402 aa15.48■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Ano8Q6PB70 1060 aa15.48■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Nup133Q8R0G9 1155 aa15.48■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 NsmfQ99NF2 532 aa15.48■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Kcnn1Q9EQR3 537 aa15.48■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Mmel1Q9JLI3 765 aa15.48■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Cdk12Q14AX6 1484 aaKnown RBP15.47■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Eya2O08575 532 aa15.47■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Cops6O88545 324 aa15.47■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Ifit1Q64282 463 aa15.47■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Znf653Q6YND2 615 aa15.47■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Ppp1r37Q8BKR5 712 aa15.47■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Tmem266Q8BZB3 538 aa15.47■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Rufy3Q9D394 469 aa15.47■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Cfap73J3QPZ5 306 aa15.47■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Myl10Q62082 202 aa15.47■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Rad17Q6NXW6 688 aa15.47■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Taf5lQ91WQ5 589 aa15.47■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Ugt1a5B2RT14 529 aa15.47■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 LyarQ08288 388 aaKnown RBP15.47■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Ubash3aQ3V3E1 624 aa15.46■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Prdm1Q60636 856 aa15.46■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 DbnlQ62418 436 aa15.46■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Fam13bQ8K2H3 851 aa15.46■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Ncoa5Q91W39 579 aaKnown RBP15.46■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Riok1Q922Q2 567 aa15.46■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Cyp2d11P24457 504 aa15.46■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Rbm33Q9CXK9 1231 aaKnown RBP15.46■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Gemin5Q8BX17 1502 aaKnown RBP15.46■□□□□ 0.07
Pdgfra-205ENSMUST00000201711 Eif5P59325 429 aaKnown RBP15.46■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Ddb1Q3U1J4 1140 aaKnown RBP15.46■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Mrpl44Q9CY73 333 aaKnown RBP15.46■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Cap2Q9CYT6 476 aa15.46■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Plekho1Q9JIY0 408 aa15.46■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Igbp1bQ9QZ29 343 aa15.46■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Ppp4r3aQ6P2K6 820 aa15.45■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Tns3Q5SSZ5 1440 aa15.45■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Zkscan7E9PVW1 718 aa15.45■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Dnm1P39053 867 aa15.45■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Ppp1r21Q3TDD9 780 aa15.45■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Tpm3P21107 285 aaKnown RBP15.44■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 HellsQ60848 821 aa15.44■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Vps53Q8CCB4 832 aa15.44■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Serpina10Q8R121 448 aa15.44■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Mybbp1aQ7TPV4 1344 aaKnown RBP15.44■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Pkp1P97350 728 aaKnown RBP15.44■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Gm12185Q5NCB2 835 aa15.44■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Psrc1Q9D0P7 329 aa15.44■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Topbp1Q6ZQF0 1515 aa15.44■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Nrxn1Q9CS84 1514 aa15.44■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Zscan20B2KFW1 1030 aa15.44■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Pank2Q3U4S0 443 aa15.44■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Zc3h12cQ5DTV4 884 aa15.44■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Ppp1r10Q80W00 888 aaKnown RBP15.44■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Eno4Q8C042 619 aa15.44■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Trim29Q8R2Q0 587 aa15.44■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Nop14Q8R3N1 860 aaKnown RBP15.44■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Speer4dL7N216 212 aa15.43■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Usp25P57080 1055 aa15.43■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Smarcc1P97496 1104 aa15.43■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Rps6kb1Q8BSK8 525 aa15.43■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Cadps2Q8BYR5 1297 aa15.43■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Lrrc2Q8VDB8 371 aa15.43■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Abca8aQ8K442 1620 aa15.43■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 CemipQ8BI06 1361 aa15.43■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Ccdc39Q9D5Y1 937 aa15.43■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Rai14Q9EP71 979 aaKnown RBP15.43■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 ParvgQ9ERD8 331 aa15.43■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Sel1lQ9Z2G6 790 aa15.43■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Metap2O08663 478 aaKnown RBP15.43■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Pik3ap1Q9EQ32 811 aa15.43■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Vwa3bJ9JI28 736 aa15.43■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Ccdc82Q6PG04 518 aa15.43■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Fam160b2Q80YR2 744 aa15.43■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Smc2Q8CG48 1191 aaKnown RBP15.43■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Abca17E9PX95 1733 aa15.42■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Zscan29E9Q5B4 869 aa15.42■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 IntuQ059U7 942 aa15.42■□□□□ 0.06
Pdgfra-205ENSMUST00000201711 Zbtb40Q6PCS8 1258 aa15.42■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 113 ms