RNA–Protein interactions for RNA: ENSMUST00000111043.8

Bdnf-203, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,839 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-203ENSMUST00000111043 Ddx19aQ61655 478 aaKnown RBP8.9□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Jmjd4Q8BFT6 427 aa8.9□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Prune1Q8BIW1 454 aa8.9□□□□□ -0.98
Bdnf-203ENSMUST00000111043 GptQ8QZR5 496 aa8.9□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Tmem132aQ922P8 1018 aa8.9□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Gtpbp4Q99ME9 634 aaKnown RBP8.9□□□□□ -0.98
Bdnf-203ENSMUST00000111043 Kcnh4A2A5F7 1018 aa8.9□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Hoxa7P02830 229 aa8.9□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Adora1Q60612 326 aa8.9□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Tbc1d31Q6NXY1 996 aa8.9□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Cyp27a1Q9DBG1 533 aa8.9□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Brpf1B2RRD7 1212 aa8.89□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Mmp8O70138 465 aa8.89□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Myd88P22366 296 aa8.89□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Pdia3P27773 505 aaKnown RBP8.89□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Ankle2Q6P1H6 964 aa8.89□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Q8C5K5 320 aa8.89□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Serpina10Q8R121 448 aa8.89□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Gm45015A0A140LII9 184 aa8.89□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Gm18336A0A140LIU8 765 aa8.89□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Anp32eP97822 260 aaKnown RBP8.89□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Samm50Q8BGH2 469 aa8.89□□□□□ -0.99
Bdnf-203ENSMUST00000111043 4930504O13RikQ8C5Z9 145 aa8.89□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Ginm1Q91WR6 327 aa8.89□□□□□ -0.99
Bdnf-203ENSMUST00000111043 LlphQ9D945 130 aaKnown RBP8.89□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Mmel1Q9JLI3 765 aa8.89□□□□□ -0.99
Bdnf-203ENSMUST00000111043 MypnQ5DTJ9 1315 aa8.89□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Ptgs1P22437 602 aa8.89□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Fam114a1Q9D281 569 aa8.89□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Fam84aQ9D650 292 aa8.89□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Gdpd2Q9ESM6 539 aa8.89□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Bcl9lQ67FY2 1494 aa8.89□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Hmgb1P63158 215 aaKnown RBP8.88□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Cpa2Q504N0 417 aa8.88□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Polr3gQ6NXY9 223 aa8.88□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Otud6bQ8K2H2 294 aa8.88□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Abca15E9PWH4 1668 aa8.88□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Ppm1mQ8BU27 406 aa8.88□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Cchcr1Q8K2I2 770 aa8.88□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Zkscan7E9PVW1 718 aa8.88□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Bach2P97303 839 aa8.88□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Nup88Q8CEC0 753 aaKnown RBP8.88□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Noc3lQ8VI84 807 aaKnown RBP8.88□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Tomm22Q9CPQ3 142 aa8.88□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Dmrtc1Q9D9R7 182 aa8.88□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Flt4P35917 1363 aa8.87□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Ube2hP62257 183 aa8.87□□□□□ -0.99
Bdnf-203ENSMUST00000111043 VeztQ3ZK22 780 aa8.87□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Ptpdc1Q6NZK8 747 aa8.87□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Stard3nlQ9DCI3 235 aa8.87□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Ltb4r2Q9JJL9 360 aa8.87□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Mad1l1Q9WTX8 717 aaKnown RBP8.87□□□□□ -0.99
Bdnf-203ENSMUST00000111043 GakQ99KY4 1305 aa8.87□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Col4a1P02463 1669 aa8.87□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Tpx2A2APB8 745 aaKnown RBP8.87□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Emilin2Q8K482 1074 aa8.87□□□□□ -0.99
Bdnf-203ENSMUST00000111043 E2f4Q8R0K9 410 aa8.87□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Tpm1P58771 284 aa8.87□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Zbtb40Q6PCS8 1258 aa8.87□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Crb1Q8VHS2 1405 aa8.86□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Mcmdc2E9Q956 681 aa8.86□□□□□ -0.99
Bdnf-203ENSMUST00000111043 InhbeO08717 350 aa8.86□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Dctn1O08788 1281 aa8.86□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Anxa1P10107 346 aaKnown RBP8.86□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Ccdc178Q8CDV0 866 aa8.86□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Zbtb3Q91X45 518 aa8.86□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Ppp6r3Q922D4 844 aa8.86□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Rrs1Q9CYH6 365 aaKnown RBP8.86□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Pmfbp1Q9WVQ0 1022 aa8.86□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Slf2Q6P9P0 1278 aa8.86□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Jakmip1Q8BVL9 626 aa8.86□□□□□ -0.99
Bdnf-203ENSMUST00000111043 NaspQ99MD9 773 aaKnown RBP8.86□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Tbc1d8Q9Z1A9 1134 aa8.86□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Stk36Q69ZM6 1316 aa8.86□□□□□ -0.99
Bdnf-203ENSMUST00000111043 EvcP57680 1005 aa8.86□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Anapc15P60007 132 aa8.86□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Cfap157Q0VFX2 523 aa8.86□□□□□ -0.99
Bdnf-203ENSMUST00000111043 MpndQ3TV65 487 aa8.86□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Ripor2Q80U16 1078 aa8.86□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Iffo2Q8R2V2 512 aa8.86□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Bicd2Q921C5 820 aa8.86□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Kcnj4P52189 445 aa8.85□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Ncbp1Q3UYV9 790 aaKnown RBP8.85□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Ddx58Q6Q899 926 aa8.85□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Cwc25Q9DBF7 416 aa8.85□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Rapgef4Q9EQZ6 1011 aa8.85□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Wdr33Q8K4P0 1330 aaKnown RBP8.85□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Ppfibp2O35711 882 aa8.85□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Mcm3P25206 812 aaKnown RBP8.85□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Slc26a8Q8R0C3 999 aa8.85□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Gm9992B2RWK3 458 aa8.85□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Cfap73J3QPZ5 306 aa8.85□□□□□ -0.99
Bdnf-203ENSMUST00000111043 U2af2P26369 475 aaKnown RBP8.85□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Smarcc1P97496 1104 aa8.85□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Unc93aQ710D3 458 aa8.85□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Dnaaf4Q8R368 420 aa8.85□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Nlrp3Q8R4B8 1033 aa8.85□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Dlg5E9Q9R9 1921 aa8.84□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Trap1aP19473 224 aa8.84□□□□□ -0.99
Bdnf-203ENSMUST00000111043 Nol8Q3UHX0 1147 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms