RNA–Protein interactions for RNA: ENSMUST00000098098.8

Rnf38-202, Transcript of E3 ubiquitin-protein ligase RNF38, mousemouse

TSL 1 (best) BASIC

Gene Rnf38, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38-202ENSMUST00000098098 Ppp4r3bQ922R5 820 aa17.31■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Eif5P59325 429 aaKnown RBP17.3■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Usp25P57080 1055 aa17.3■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Bend3Q6PAL0 825 aa17.3■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Rab3gap1Q80UJ7 981 aa17.3■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Dhx38Q80X98 1228 aa17.3■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Lrrfip2Q91WK0 415 aa17.3■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Sult6b1P0CC03 303 aa17.3■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Rnf41Q8BH75 317 aa17.3■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Cnot6lQ8VEG6 555 aa17.3■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Adora1Q60612 326 aa17.3■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Bag1Q60739 355 aa17.3■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Cdc42bpgQ80UW5 1551 aa17.3■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Gm12185Q5NCB2 835 aa17.29■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Lmbrd2Q8C561 694 aa17.29■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Prex1Q69ZK0 1650 aa17.29■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Igsf1Q7TQA1 1317 aa17.29■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Bin1O08539 588 aaKnown RBP17.29■□□□□ 0.36
Rnf38-202ENSMUST00000098098 PtpruB1AUH1 1446 aa17.29■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Cavin1O54724 392 aa17.29■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Ercc6l2Q9JIM3 1537 aa17.29■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Metap2O08663 478 aaKnown RBP17.29■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Cops6O88545 324 aa17.29■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Eya2O08575 532 aa17.28■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Gnl2Q99LH1 728 aaKnown RBP17.28■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Gm45015A0A140LII9 184 aa17.28■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Gm18336A0A140LIU8 765 aa17.28■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Ccdc43Q9CR29 222 aaKnown RBP17.28■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Ncapd2Q8K2Z4 1392 aa17.28■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Ccdc34Q3UI66 367 aa17.28■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Utp18Q5SSI6 552 aaKnown RBP17.28■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Tmco3Q8BH01 678 aa17.28■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Map7d2A2AG50 781 aa17.28■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Ppp1r10Q80W00 888 aaKnown RBP17.28■□□□□ 0.36
Rnf38-202ENSMUST00000098098 U2af1l4Q8BGJ9 220 aa17.28■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Srgap1Q91Z69 1062 aa17.28■□□□□ 0.36
Rnf38-202ENSMUST00000098098 HellsQ60848 821 aa17.27■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Trim11Q99PQ2 467 aa17.27■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Stxbp4Q9WV89 557 aa17.27■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Arid4aF8VPQ2 1261 aaKnown RBP17.27■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Ano8Q6PB70 1060 aa17.27■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Pdcl2Q78Y63 240 aa17.27■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Rbm17Q8JZX4 405 aaKnown RBP17.27■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Serpina10Q8R121 448 aa17.27■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Luzp1Q8R4U7 1068 aaKnown RBP17.27■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Ginm1Q91WR6 327 aa17.27■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Lmbr1Q9JIT0 490 aa17.27■□□□□ 0.36
Rnf38-202ENSMUST00000098098 IkQ9Z1M8 557 aaKnown RBP17.27■□□□□ 0.36
Rnf38-202ENSMUST00000098098 Wdhd1P59328 1117 aa17.27■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Zbtb43Q9DAI4 467 aa17.27■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Sil1Q9EPK6 465 aa17.27■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Ncbp1Q3UYV9 790 aaKnown RBP17.26■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Adam1aQ60813 791 aa17.26■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Miga2Q8BK03 593 aa17.26■□□□□ 0.35
Rnf38-202ENSMUST00000098098 DymQ8CHY3 669 aa17.26■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Anp32eP97822 260 aaKnown RBP17.26■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Zkscan8Q8BSL0 588 aa17.26■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Ift57Q8BXG3 429 aa17.26■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Rufy3Q9D394 469 aa17.26■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Lamb3Q61087 1168 aa17.26■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Tgfb1i1Q62219 461 aa17.26■□□□□ 0.35
Rnf38-202ENSMUST00000098098 RarsQ9D0I9 660 aaKnown RBP17.26■□□□□ 0.35
Rnf38-202ENSMUST00000098098 PigbQ9JJQ0 542 aa17.26■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Znf653Q6YND2 615 aa17.25■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Tsr2Q8C8T8 191 aa17.25■□□□□ 0.35
Rnf38-202ENSMUST00000098098 TnksQ6PFX9 1320 aa17.25■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Dhx8A2A4P0 1244 aaKnown RBP17.25■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Gm7347D3YYI9 267 aa17.25■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Speer4aF8VPX6 267 aa17.25■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Prl3d2F6R3P9 224 aa17.25■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Morc2aQ69ZX6 1030 aa17.25■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Dnaaf4Q8R368 420 aa17.25■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Galntl5Q9D4M9 431 aa17.25■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Syde2E9PUP1 1314 aa17.25■□□□□ 0.35
Rnf38-202ENSMUST00000098098 CebpzP53569 1052 aaKnown RBP17.25■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Clcn1Q64347 994 aa17.25■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Pram1Q6BCL1 675 aa17.25■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Ano1Q8BHY3 960 aa17.25■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Cep170bQ80U49 1574 aa17.25■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Tns3Q5SSZ5 1440 aa17.25■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Tmc2Q8R4P4 888 aa17.24■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Slc4a4O88343 1079 aa17.24■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Ccdc102aQ3TMW1 549 aa17.24■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Esyt1Q3U7R1 1092 aaKnown RBP17.24■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Larp6Q8BN59 492 aa17.24■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Mtmr3Q8K296 1196 aa17.24■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Otud6bQ8K2H2 294 aa17.24■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Rbm19Q8R3C6 952 aaKnown RBP17.24■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Stx1aO35526 288 aa17.24■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Spg7Q3ULF4 781 aa17.24■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Pla2g4fQ50L41 855 aa17.24■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Gse1Q3U3C9 1213 aa17.24■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Tango6Q8C3S2 1079 aa17.24■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Esco1Q69Z69 843 aa17.23■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Ankrd13dQ6PD24 605 aa17.23■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Dnm1P39053 867 aa17.23■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Ufl1Q8CCJ3 793 aaKnown RBP17.23■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Qtrt2B8ZXI1 415 aa17.22■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Casp1P29452 402 aa17.22■□□□□ 0.35
Rnf38-202ENSMUST00000098098 Kank4Q6P9J5 1016 aa17.22■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 38.4 ms