RNA–Protein interactions for RNA: ENSMUST00000071588.7

Nkx6-3-201, Transcript of Homeobox protein Nkx-6.3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx6-3, Length 2,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3-201ENSMUST00000071588 PdcQ9QW08 244 aa15.95■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Myo1cQ9WTI7 1063 aa15.95■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 AW822073A0A0N4SUK1 652 aa15.94■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Phactr2B1AVP0 632 aa15.94■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Nol10Q5RJG1 687 aaKnown RBP15.94■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Btbd11Q6GQW0 1109 aa15.94■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Spata31d1bE9QA57 1361 aa15.94■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Myo5bP21271 1818 aa15.94■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Anapc15P60007 132 aa15.94■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Frat1P70339 274 aa15.94■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Ctr9Q62018 1173 aaKnown RBP15.94■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Ccdc155Q80VJ8 648 aa15.94■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Pmfbp1Q9WVQ0 1022 aa15.94■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Tns2Q8CGB6 1400 aa15.94■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Tnks1bp1P58871 1720 aa15.93■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Msh6P54276 1358 aaKnown RBP15.92■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Gm21680A0A0G2JGR8 267 aa15.92■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Strn4P58404 760 aa15.92■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Ube2oQ6ZPJ3 1288 aa15.92■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Sv2bQ8BG39 683 aa15.92■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Spata16Q8C636 571 aa15.92■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Kif3cO35066 796 aa15.92■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Smarce1O54941 411 aaKnown RBP15.92■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Chpf2Q3UU43 768 aa15.92■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Larp1Q6ZQ58 1072 aaKnown RBP15.92■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Cyp2d12Q8BVD2 504 aa15.92■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Tmx4Q8C0L0 335 aa15.92■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Eif3bQ8JZQ9 803 aaKnown RBP15.92■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Smarca5Q91ZW3 1051 aaKnown RBP15.92■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Hmgn5Q9JL35 406 aa15.92■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Nol8Q3UHX0 1147 aaKnown RBP15.91■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Utp18Q5SSI6 552 aaKnown RBP15.91■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Spag5Q7TME2 1165 aa15.91■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Asic4Q7TNS7 539 aa15.91■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Zranb2Q9R020 330 aaKnown RBP15.91■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Cd22P35329 862 aa15.91■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 KinQ8K339 391 aa15.91■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Zfp804bA0A0G2JGH6 1343 aa15.9■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Prkar2bP31324 416 aa15.9■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Mmp14P53690 582 aa15.9■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Tyro3P55144 880 aa15.9■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Erich4Q3UNU4 136 aa15.9■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Fsd2Q8BZ52 692 aa15.9■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Tmx1Q8VBT0 278 aa15.9■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Gm21663A0A0G2JE01 267 aa15.9■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Exoc6bA6H5Z3 810 aa15.9■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Gm7361D3Z6R1 267 aa15.9■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 5031410I06RikE9Q4E0 267 aa15.9■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Gm1979E9QAN3 267 aa15.9■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Gm5862K7N5V5 267 aa15.9■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Gm10220K7N660 267 aa15.9■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Fbxo41Q6NS60 873 aa15.9■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Znf532Q6NXK2 1036 aa15.9■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Lrrc8aQ80WG5 810 aa15.9■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Tomm22Q9CPQ3 142 aa15.9■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 MycbpQ9EQS3 103 aa15.9■□□□□ 0.14
Nkx6-3-201ENSMUST00000071588 Atf5O70191 283 aa15.89■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Eif4a1P60843 406 aaKnown RBP15.89■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Pnpla2Q8BJ56 486 aa15.89■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Nup88Q8CEC0 753 aaKnown RBP15.89■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Zkscan3Q91VW9 553 aa15.89■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Stx6Q9JKK1 255 aa15.89■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Atg4a-psA0A0G2JFS9 396 aa15.88■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Slc5a1Q8C3K6 665 aa15.88■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Atg4aQ8C9S8 396 aa15.88■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Wdr33Q8K4P0 1330 aaKnown RBP15.88■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 EappQ5BU09 281 aa15.88■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Pdzrn3Q69ZS0 1063 aa15.88■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Igsf3Q6ZQA6 1194 aa15.88■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Psrc1Q9D0P7 329 aa15.88■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Cyp46a1Q9WVK8 500 aa15.88■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 MccE9PWI3 1003 aa15.87■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Kcnd1Q03719 651 aa15.87■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Ssfa2Q922B9 1252 aa15.87■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Zbtb22Q9Z0G7 638 aa15.87■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Dlg5E9Q9R9 1921 aa15.87■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Kiaa1211Q5PR69 1207 aa15.87■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Adck5Q80V03 582 aa15.87■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Arid5bQ8BM75 1188 aaKnown RBP15.87■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Dnaaf2Q8BPI1 814 aa15.87■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Ccdc38Q8CDN8 563 aa15.87■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Col1a2Q01149 1372 aa15.87■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Casz1Q9CWL2 1761 aa15.86■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 RargP18911 458 aaKnown RBP15.86■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Ercc3P49135 783 aa15.86■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 CalcaP70160 136 aa15.86■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Prune1Q8BIW1 454 aa15.86■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Bmp2kQ91Z96 1138 aa15.86■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Fam83gQ5SWY7 812 aa15.86■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Elf2Q9JHC9 593 aa15.86■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Cfdp1O88271 295 aaKnown RBP15.85■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Fkbp4P30416 458 aa15.85■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Plcb3P51432 1234 aaKnown RBP15.85■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Tsen34Q8BMZ5 316 aa15.85■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 RestQ8VIG1 1082 aa15.85■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Cfap58B2RW38 873 aa15.84■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Zbtb38Q3LR78 1197 aa15.84■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Trak2Q6P9N8 913 aa15.84■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Adcy2Q80TL1 1090 aa15.84■□□□□ 0.13
Nkx6-3-201ENSMUST00000071588 Cgref1Q8R1U2 281 aa15.84■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms