RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 SLC17A1Q14916 467 aa15.63■□□□□ 0.09
SHKBP1-227ENST00000602011 KLHL24Q6TFL4 600 aa15.63■□□□□ 0.09
SHKBP1-227ENST00000602011 CASP12Q6UXS9 341 aa15.63■□□□□ 0.09
SHKBP1-227ENST00000602011 CCDC103Q8IW40 242 aa15.63■□□□□ 0.09
SHKBP1-227ENST00000602011 CLEC4FQ8N1N0 589 aa15.63■□□□□ 0.09
SHKBP1-227ENST00000602011 WDR31Q8NA23 367 aa15.63■□□□□ 0.09
SHKBP1-227ENST00000602011 RAB8BQ92930 207 aa15.63■□□□□ 0.09
SHKBP1-227ENST00000602011 ZG16BQ96DA0 208 aa15.63■□□□□ 0.09
SHKBP1-227ENST00000602011 CCDC115Q96NT0 180 aa15.63■□□□□ 0.09
SHKBP1-227ENST00000602011 SLC35A5Q9BS91 424 aa15.63■□□□□ 0.09
SHKBP1-227ENST00000602011 SSU72Q9NP77 194 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-227ENST00000602011 MYOZ1Q9NP98 299 aaPredicted RBP15.63■□□□□ 0.09
SHKBP1-227ENST00000602011 OSGIN1Q9UJX0 560 aa15.63■□□□□ 0.09
SHKBP1-227ENST00000602011 FLVCR1Q9Y5Y0 555 aa15.63■□□□□ 0.09
SHKBP1-227ENST00000602011 ATP23Q9Y6H3 246 aa15.63■□□□□ 0.09
SHKBP1-227ENST00000602011 CFAP73A6NFT4 308 aa15.62■□□□□ 0.09
SHKBP1-227ENST00000602011 GPIP06744 558 aa15.62■□□□□ 0.09
SHKBP1-227ENST00000602011 DBIP07108 87 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-227ENST00000602011 IL7RP16871 459 aa15.62■□□□□ 0.09
SHKBP1-227ENST00000602011 USF1P22415 310 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-227ENST00000602011 NTF4P34130 210 aa15.62■□□□□ 0.09
SHKBP1-227ENST00000602011 GZMKP49863 264 aa15.62■□□□□ 0.09
SHKBP1-227ENST00000602011 PHC1P78364 1004 aa15.62■□□□□ 0.09
SHKBP1-227ENST00000602011 PDCD2Q16342 344 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-227ENST00000602011 C10orf105Q8TEF2 133 aa15.62■□□□□ 0.09
SHKBP1-227ENST00000602011 OR11A1Q9GZK7 315 aa15.62■□□□□ 0.09
SHKBP1-227ENST00000602011 ADAM19Q9H013 955 aa15.62■□□□□ 0.09
SHKBP1-227ENST00000602011 HAO1Q9UJM8 370 aa15.62■□□□□ 0.09
SHKBP1-227ENST00000602011 FKBP7Q9Y680 259 aa15.62■□□□□ 0.09
SHKBP1-227ENST00000602011 E9PBE3 544 aa15.61■□□□□ 0.09
SHKBP1-227ENST00000602011 HMGN4O00479 90 aa15.61■□□□□ 0.09
SHKBP1-227ENST00000602011 TM9SF1O15321 606 aa15.61■□□□□ 0.09
SHKBP1-227ENST00000602011 PHF1O43189 567 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-227ENST00000602011 HOXB1P14653 301 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-227ENST00000602011 TACR3P29371 465 aa15.61■□□□□ 0.09
SHKBP1-227ENST00000602011 LSM11P83369 360 aaKnown RBP eCLIP15.61■□□□□ 0.09
SHKBP1-227ENST00000602011 OGFOD2Q6N063 350 aa15.61■□□□□ 0.09
SHKBP1-227ENST00000602011 ANKRD46Q86W74 232 aa15.61■□□□□ 0.09
SHKBP1-227ENST00000602011 ZNF781Q8N8C0 355 aa15.61■□□□□ 0.09
SHKBP1-227ENST00000602011 ZNF540Q8NDQ6 660 aa15.61■□□□□ 0.09
SHKBP1-227ENST00000602011 OR52E4Q8NGH9 312 aa15.61■□□□□ 0.09
SHKBP1-227ENST00000602011 CNOT9Q92600 299 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-227ENST00000602011 SLC7A10Q9NS82 523 aa15.61■□□□□ 0.09
SHKBP1-227ENST00000602011 TMEM45AQ9NWC5 275 aa15.61■□□□□ 0.09
SHKBP1-227ENST00000602011 CALML5Q9NZT1 146 aa15.61■□□□□ 0.09
SHKBP1-227ENST00000602011 CCDC154A6NI56 674 aa15.6■□□□□ 0.09
SHKBP1-227ENST00000602011 VSTM5A8MXK1 200 aa15.6■□□□□ 0.09
SHKBP1-227ENST00000602011 KRT75O95678 551 aa15.6■□□□□ 0.09
SHKBP1-227ENST00000602011 CXCR1P25024 350 aa15.6■□□□□ 0.09
SHKBP1-227ENST00000602011 COPZ1P61923 177 aa15.6■□□□□ 0.09
SHKBP1-227ENST00000602011 FUT5Q11128 374 aa15.6■□□□□ 0.09
SHKBP1-227ENST00000602011 CHI3L2Q15782 390 aa15.6■□□□□ 0.09
SHKBP1-227ENST00000602011 C3orf36Q3SXR2 165 aa15.6■□□□□ 0.09
SHKBP1-227ENST00000602011 SPANXN4Q5MJ08 99 aa15.6■□□□□ 0.09
SHKBP1-227ENST00000602011 TSPO2Q5TGU0 170 aa15.6■□□□□ 0.09
SHKBP1-227ENST00000602011 AAED1Q7RTV5 226 aa15.6■□□□□ 0.09
SHKBP1-227ENST00000602011 PEX5LQ8IYB4 626 aa15.6■□□□□ 0.09
SHKBP1-227ENST00000602011 GLB1L3Q8NCI6 653 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-227ENST00000602011 WDR60Q8WVS4 1066 aa15.6■□□□□ 0.09
SHKBP1-227ENST00000602011 PANX1Q96RD7 426 aa15.6■□□□□ 0.09
SHKBP1-227ENST00000602011 KCNS3Q9BQ31 491 aa15.6■□□□□ 0.09
SHKBP1-227ENST00000602011 SHARPINQ9H0F6 387 aa15.6■□□□□ 0.09
SHKBP1-227ENST00000602011 SLC38A1Q9H2H9 487 aa15.6■□□□□ 0.09
SHKBP1-227ENST00000602011 ARMC7Q9H6L4 198 aa15.6■□□□□ 0.09
SHKBP1-227ENST00000602011 A0A096LPI6 279 aa15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 TMEM72A0PK05 275 aa15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 ITM2AO43736 263 aa15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 PDE5AO76074 875 aa15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 NR2F1P10589 423 aa15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 IMPDH2P12268 514 aa15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 CCNA2P20248 432 aa15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 RPS4Y1P22090 263 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 SLC1A6P48664 564 aa15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 PDLIM4P50479 330 aa15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 SRSF2Q01130 221 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 EPS8Q12929 822 aa15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 SWI5Q1ZZU3 235 aa15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 FAM174BQ3ZCQ3 159 aa15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 OTUD3Q5T2D3 398 aaPredicted RBP15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 TMEM225Q6GV28 225 aa15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 B3GLCTQ6Y288 498 aa15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 OLIG3Q7RTU3 272 aa15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 SPATA19Q7Z5L4 167 aa15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 RNF130Q86XS8 419 aa15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 ZNF525Q8N782 197 aa15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 FAM169BQ8N8A8 192 aa15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 HTRA1Q92743 480 aa15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 TAPBPLQ9BX59 468 aa15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 C1QTNF6Q9BXI9 259 aa15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 MEAF6Q9HAF1 191 aa15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 THUMPD1Q9NXG2 353 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-227ENST00000602011 HEATR1Q9H583 2144 aaKnown RBP15.58■□□□□ 0.08
SHKBP1-227ENST00000602011 A0A1W2PR80 420 aa15.58■□□□□ 0.08
SHKBP1-227ENST00000602011 PRAMEF27A3QJZ7 478 aa15.58■□□□□ 0.08
SHKBP1-227ENST00000602011 AQP7P3A6NL99 342 aa15.58■□□□□ 0.08
SHKBP1-227ENST00000602011 LMX1BO60663 402 aa15.58■□□□□ 0.08
SHKBP1-227ENST00000602011 BCAS1O75363 584 aaPredicted RBP15.58■□□□□ 0.08
SHKBP1-227ENST00000602011 KRT33AO76009 404 aa15.58■□□□□ 0.08
SHKBP1-227ENST00000602011 CREB1P16220 341 aa15.58■□□□□ 0.08
SHKBP1-227ENST00000602011 SNRPD2P62316 118 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms