RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-222	ENST00000600517	TRIM2	Q9C040	744 aa		11.95	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	C12orf10	Q9HB07	376 aa		11.95	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	EMC3	Q9P0I2	261 aa		11.95	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	CAPN7	Q9Y6W3	813 aa		11.95	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	MPDZ	O75970	2070 aa		11.95	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	DEFB108A	A8MXU0	73 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	MRAS	O14807	208 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	CCDC22	O60826	627 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	CNOT4	O95628	575 aa	Known RBP	11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	ADA	P00813	363 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	GPI	P06744	558 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	C8B	P07358	591 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	EDNRA	P25101	427 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	HTR2A	P28223	471 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	NTF4	P34130	210 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	PCGF2	P35227	344 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	CEACAM7	Q14002	265 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	VMAC	Q2NL98	169 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	RABL3	Q5HYI8	236 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	SFRP5	Q5T4F7	317 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	C1orf140	Q5VVS0	124 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	FBXW10	Q5XX13	1052 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	REP15	Q6BDI9	236 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	C6orf89	Q6UWU4	347 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517		Q6ZT83	130 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	PATL1	Q86TB9	770 aa	Known RBP	11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	LSR	Q86X29	649 aa	Predicted RBP	11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	CXorf67	Q86X51	503 aa	Predicted RBP	11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	CALHM3	Q86XJ0	350 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	PCYOX1L	Q8NBM8	494 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	STEAP2	Q8NFT2	490 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	OR52E4	Q8NGH9	312 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	STK35	Q8TDR2	534 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	DNAJA4	Q8WW22	397 aa	Predicted RBP	11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	WFDC6	Q9BQY6	131 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	PRR14	Q9BWN1	585 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	ACTR6	Q9GZN1	396 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	LIME1	Q9H400	295 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	PLEKHF2	Q9H8W4	249 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	ARMCX1	Q9P291	453 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	RPS6KB2	Q9UBS0	482 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	PRSS50	Q9UI38	385 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	ABCA4	P78363	2273 aa		11.94	□□□□□ -0.5
ARHGEF1-222	ENST00000600517		A0A1B0GWA3	101 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	SIAH2	O43255	324 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	TPST2	O60704	377 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	LGI1	O95970	557 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	PNMT	P11086	282 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	SEC24C	P53992	1094 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	RGS8	P57771	180 aa	Predicted RBP	11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	EGR4	Q05215	589 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	ITGAD	Q13349	1161 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	SLC17A1	Q14916	467 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	POU4F3	Q15319	338 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	OR7A5	Q15622	319 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	DUSP7	Q16829	419 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	INTS11	Q5TA45	600 aa	Known RBP	11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	ULK3	Q6PHR2	472 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	CCDC80	Q76M96	950 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	LURAP1L	Q8IV03	231 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	ZNF100	Q8IYN0	542 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	TMEM99	Q8N816	258 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	SMYD1	Q8NB12	490 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	RP9	Q8TA86	221 aa	Known RBP	11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	ZC3HAV1L	Q96H79	300 aa	Known RBP	11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	ZNF583	Q96ND8	569 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	USB1	Q9BQ65	265 aa	Known RBP	11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	ECSIT	Q9BQ95	431 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	SF3B5	Q9BWJ5	86 aa	Known RBP	11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	TAPBPL	Q9BX59	468 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	PIF1	Q9H611	641 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	GID8	Q9NWU2	228 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	C6orf203	Q9P0P8	240 aa	Predicted RBP	11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	TES	Q9UGI8	421 aa	Known RBP	11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	SLC13A4	Q9UKG4	626 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	ITGB1BP2	Q9UKP3	347 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	EDAR	Q9UNE0	448 aa		11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	NOSIP	Q9Y314	301 aa	Known RBP	11.93	□□□□□ -0.5
ARHGEF1-222	ENST00000600517		A0A1W2PPR1	153 aa		11.92	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	AQP7P3	A6NL99	342 aa		11.92	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	ELOA3D	A6NLF2	546 aa	Predicted RBP	11.92	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	KLF4	O43474	513 aa		11.92	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	MRPL33	O75394	65 aa	Known RBP	11.92	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	IST1	P53990	364 aa		11.92	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	VEZF1	Q14119	521 aa		11.92	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	TESK1	Q15569	626 aa		11.92	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	ELOA3B	Q3SY89	546 aa		11.92	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	OTUD3	Q5T2D3	398 aa	Predicted RBP	11.92	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	FBXW9	Q5XUX1	488 aa		11.92	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	FAM91A1	Q658Y4	838 aa		11.92	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	SPATA21	Q7Z572	469 aa		11.92	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	ELOA3	Q8NG57	546 aa		11.92	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	GPR32P1	Q8NGA4	272 aa		11.92	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	MFSD8	Q8NHS3	518 aa		11.92	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	NINJ1	Q92982	152 aa		11.92	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	KISS1R	Q969F8	398 aa	Predicted RBP	11.92	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	SLC38A4	Q969I6	547 aa		11.92	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	APH1A	Q96BI3	265 aa		11.92	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	S100PBP	Q96BU1	408 aa		11.92	□□□□□ -0.5
ARHGEF1-222	ENST00000600517	SLC47A1	Q96FL8	570 aa		11.92	□□□□□ -0.5

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