RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 SZRD1Q7Z422 152 aa7.54□□□□□ -1.2
SMAD4-215ENST00000592911 SPATA19Q7Z5L4 167 aa7.54□□□□□ -1.2
SMAD4-215ENST00000592911 TMCO5AQ8N6Q1 288 aa7.54□□□□□ -1.2
SMAD4-215ENST00000592911 ATP6V1C2Q8NEY4 427 aa7.54□□□□□ -1.2
SMAD4-215ENST00000592911 ACMSDQ8TDX5 336 aa7.54□□□□□ -1.2
SMAD4-215ENST00000592911 JADE3Q92613 823 aa7.54□□□□□ -1.2
SMAD4-215ENST00000592911 CDS1Q92903 461 aa7.54□□□□□ -1.2
SMAD4-215ENST00000592911 MRPL24Q96A35 216 aaKnown RBP7.54□□□□□ -1.2
SMAD4-215ENST00000592911 SNX18Q96RF0 628 aa7.54□□□□□ -1.2
SMAD4-215ENST00000592911 PAFAH2Q99487 392 aa7.54□□□□□ -1.2
SMAD4-215ENST00000592911 KLHDC3Q9BQ90 382 aa7.54□□□□□ -1.2
SMAD4-215ENST00000592911 CCDC106Q9BWC9 280 aa7.54□□□□□ -1.2
SMAD4-215ENST00000592911 MS4A5Q9H3V2 200 aa7.54□□□□□ -1.2
SMAD4-215ENST00000592911 MID1IP1Q9NPA3 183 aa7.54□□□□□ -1.2
SMAD4-215ENST00000592911 SLC7A10Q9NS82 523 aa7.54□□□□□ -1.2
SMAD4-215ENST00000592911 ATAD3AQ9NVI7 634 aa7.54□□□□□ -1.2
SMAD4-215ENST00000592911 HIF1ANQ9NWT6 349 aa7.54□□□□□ -1.2
SMAD4-215ENST00000592911 CCL27Q9Y4X3 112 aa7.54□□□□□ -1.2
SMAD4-215ENST00000592911 POLR3HQ9Y535 204 aaPredicted RBP7.54□□□□□ -1.2
SMAD4-215ENST00000592911 ZNF587BE7ETH6 402 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 hCG_2039718K7EN88 272 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 FAAHO00519 579 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 STX11O75558 287 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 LYPLA1O75608 230 aaPredicted RBP7.53□□□□□ -1.2
SMAD4-215ENST00000592911 CSTAP01040 98 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 IGHV3-9P01782 118 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 HKR1P10072 659 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 IL2RGP31785 369 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 HPCAL1P37235 193 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 MAP2K3P46734 347 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 SLC25A3Q00325 362 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 CCNJQ5T5M9 372 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 ANKRD16Q6P6B7 361 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 C1QL2Q7Z5L3 287 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 ANKS4BQ8N8V4 417 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 OR52E4Q8NGH9 312 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 OR5P2Q8WZ92 322 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 CIDECQ96AQ7 238 aaPredicted RBP7.53□□□□□ -1.2
SMAD4-215ENST00000592911 DDIT4LQ96D03 193 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 C16orf58Q96GQ5 468 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 THUMPD3Q9BV44 507 aaKnown RBP7.53□□□□□ -1.2
SMAD4-215ENST00000592911 ZNF416Q9BWM5 594 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 SLITRK2Q9H156 845 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 GSTO2Q9H4Y5 243 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 ZNF385DQ9H6B1 395 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 SIRT3Q9NTG7 399 aaPredicted RBP7.53□□□□□ -1.2
SMAD4-215ENST00000592911 GPATCH2Q9NW75 528 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 SH3BP4Q9P0V3 963 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 ARMCX1Q9P291 453 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 ATP6V1HQ9UI12 483 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 TIMM22Q9Y584 194 aa7.53□□□□□ -1.2
SMAD4-215ENST00000592911 A0A0G2JMP0 313 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 A0A0X1KG70 313 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 A0A1W2PR80 420 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 TMEM114B3SHH9 223 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 TRIM49D1C9J1S8 452 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 C9JVG2 144 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 OIP5O43482 229 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 SYNGR3O43761 229 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 SEC22BO75396 215 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 CRCPO75575 148 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 BCL10O95999 233 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 GSNP06396 782 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 SAGP10523 405 aaPredicted RBP7.52□□□□□ -1.21
SMAD4-215ENST00000592911 TFPIP10646 304 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 ADRA2CP18825 462 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 SDC1P18827 310 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 MAPK1P28482 360 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 NTF4P34130 210 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 ARR3P36575 388 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 GPR6P46095 362 aaPredicted RBP7.52□□□□□ -1.21
SMAD4-215ENST00000592911 CCT3P49368 545 aaKnown RBP7.52□□□□□ -1.21
SMAD4-215ENST00000592911 CCR4P51679 360 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 DNAJB13P59910 316 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 ETF1P62495 437 aaKnown RBP7.52□□□□□ -1.21
SMAD4-215ENST00000592911 TXNL4AP83876 142 aaKnown RBP7.52□□□□□ -1.21
SMAD4-215ENST00000592911 DEFA6Q01524 100 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 TBRG1Q3YBR2 411 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 FAM209AQ5JX71 171 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 TSPO2Q5TGU0 170 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 LYPD4Q6UWN0 246 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 FRMD7Q6ZUT3 714 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 CMIPQ8IY22 773 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 OR4M2Q8NGB6 313 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 OR1K1Q8NGR3 316 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 NANPQ8TBE9 248 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 RDH5Q92781 318 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 EGLN2Q96KS0 407 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 SDF2Q99470 211 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 PRPF18Q99633 342 aaKnown RBP7.52□□□□□ -1.21
SMAD4-215ENST00000592911 LINC00470Q9BZP3 86 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 ZNF350Q9GZX5 532 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 DENND2DQ9H6A0 471 aaPredicted RBP7.52□□□□□ -1.21
SMAD4-215ENST00000592911 ANKZF1Q9H8Y5 726 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 DYNLRB1Q9NP97 96 aa7.52□□□□□ -1.21
SMAD4-215ENST00000592911 PPIAL4EA0A075B759 164 aa7.51□□□□□ -1.21
SMAD4-215ENST00000592911 PPIAL4CA0A0B4J2A2 164 aa7.51□□□□□ -1.21
SMAD4-215ENST00000592911 PPIAL4DF5H284 164 aa7.51□□□□□ -1.21
SMAD4-215ENST00000592911 RPL36A-HNRNPH2H7BZ11 118 aa7.51□□□□□ -1.21
SMAD4-215ENST00000592911 M0R233 179 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms