RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 ZSWIM7Q19AV6 140 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 LIN52Q52LA3 116 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 RNF220Q5VTB9 566 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 FBXW10Q5XX13 1052 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 VWA1Q6PCB0 445 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 FKBP9P1Q75LS8 142 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 PIWIL3Q7Z3Z3 882 aaKnown RBP12.97□□□□□ -0.33
COMMD4-225ENST00000569245 BTLAQ7Z6A9 289 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 HMGN2P46Q86SG4 172 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 VRK2Q86Y07 508 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 GEMIN6Q8WXD5 167 aaKnown RBP12.97□□□□□ -0.33
COMMD4-225ENST00000569245 OSTF1Q92882 214 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 STARD4Q96DR4 205 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 MRGPRX4Q96LA9 322 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 KLHL15Q96M94 604 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 CHID1Q9BWS9 393 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 LAT2Q9GZY6 243 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 YY1AP1Q9H869 796 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 RNF122Q9H9V4 155 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 IL1RAPQ9NPH3 570 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 TIGARQ9NQ88 270 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 ITGB1BP2Q9UKP3 347 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 ZNF443Q9Y2A4 671 aaPredicted RBP12.97□□□□□ -0.33
COMMD4-225ENST00000569245 CHST2Q9Y4C5 530 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 V9GYQ6 96 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 ARHGAP21Q5T5U3 1957 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 KIAA1549Q9HCM3 1950 aa12.97□□□□□ -0.33
COMMD4-225ENST00000569245 HCFC1P51610 2035 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 CSMD2Q7Z408 3487 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 A0A0J9YW62 118 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 A8MXE2 369 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 MSTNO14793 375 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 FCGR1AP12314 374 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 KIR2DL2P43627 348 aaPredicted RBP12.96□□□□□ -0.33
COMMD4-225ENST00000569245 SLC6A8P48029 635 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 CTBP2P56545 445 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 SORDQ00796 357 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 SKP2Q13309 424 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 RCN1Q15293 331 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 TMEM176BQ3YBM2 270 aaPredicted RBP12.96□□□□□ -0.33
COMMD4-225ENST00000569245 GLIPR1L2Q4G1C9 344 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 ZNF836Q6ZNA1 936 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 CMIPQ8IY22 773 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 PROX1Q92786 737 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 ARSGQ96EG1 525 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 ADGRG7Q96K78 797 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 C7orf34Q96L11 122 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 ARHGDIGQ99819 225 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 OPN3Q9H1Y3 402 aaPredicted RBP12.96□□□□□ -0.33
COMMD4-225ENST00000569245 EVA1AQ9H8M9 152 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 RNPEPL1Q9HAU8 725 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.96□□□□□ -0.33
COMMD4-225ENST00000569245 DNAJB12Q9NXW2 375 aaKnown RBP12.96□□□□□ -0.33
COMMD4-225ENST00000569245 STX18Q9P2W9 335 aaKnown RBP12.96□□□□□ -0.33
COMMD4-225ENST00000569245 CLEC4AQ9UMR7 237 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 PROCRQ9UNN8 238 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 SLC35A3Q9Y2D2 325 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 EMC9Q9Y3B6 208 aa12.96□□□□□ -0.33
COMMD4-225ENST00000569245 POLQO75417 2590 aa12.96□□□□□ -0.34
COMMD4-225ENST00000569245 CDHR4A6H8M9 788 aa12.95□□□□□ -0.34
COMMD4-225ENST00000569245 FABP3P05413 133 aa12.95□□□□□ -0.34
COMMD4-225ENST00000569245 EPXP11678 715 aa12.95□□□□□ -0.34
COMMD4-225ENST00000569245 PGCP20142 388 aa12.95□□□□□ -0.34
COMMD4-225ENST00000569245 SHC1P29353 583 aa12.95□□□□□ -0.34
COMMD4-225ENST00000569245 RYKP34925 604 aa12.95□□□□□ -0.34
COMMD4-225ENST00000569245 NRF1Q16656 503 aa12.95□□□□□ -0.34
COMMD4-225ENST00000569245 CTU2Q2VPK5 515 aaKnown RBP12.95□□□□□ -0.34
COMMD4-225ENST00000569245 IQCCQ4KMZ1 466 aa12.95□□□□□ -0.34
COMMD4-225ENST00000569245 GTF2IRD2BQ6EKJ0 949 aa12.95□□□□□ -0.34
COMMD4-225ENST00000569245 FAM214BQ7L5A3 538 aa12.95□□□□□ -0.34
COMMD4-225ENST00000569245 CDH24Q86UP0 819 aa12.95□□□□□ -0.34
COMMD4-225ENST00000569245 GTF2IRD2Q86UP8 949 aa12.95□□□□□ -0.34
COMMD4-225ENST00000569245 ZNF563Q8TA94 476 aa12.95□□□□□ -0.34
COMMD4-225ENST00000569245 TMEM234Q8WY98 164 aa12.95□□□□□ -0.34
COMMD4-225ENST00000569245 SLC35B4Q969S0 331 aa12.95□□□□□ -0.34
COMMD4-225ENST00000569245 POLDIP3Q9BY77 421 aaKnown RBP12.95□□□□□ -0.34
COMMD4-225ENST00000569245 RASSF4Q9H2L5 321 aa12.95□□□□□ -0.34
COMMD4-225ENST00000569245 ARMC7Q9H6L4 198 aa12.95□□□□□ -0.34
COMMD4-225ENST00000569245 SERINC1Q9NRX5 453 aa12.95□□□□□ -0.34
COMMD4-225ENST00000569245 KLHL28Q9NXS3 571 aa12.95□□□□□ -0.34
COMMD4-225ENST00000569245 SLC13A4Q9UKG4 626 aa12.95□□□□□ -0.34
COMMD4-225ENST00000569245 SLC9A8Q9Y2E8 581 aa12.95□□□□□ -0.34
COMMD4-225ENST00000569245 SH3GLB1Q9Y371 365 aa12.95□□□□□ -0.34
COMMD4-225ENST00000569245 PDZD2O15018 2839 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 A6NNC1 897 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 CASKO14936 926 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 EFNA2O43921 213 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 CTAG2O75638 210 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 TIPRLO75663 272 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 IFNW1P05000 195 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 ANPEPP15144 967 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 ITGA2P17301 1181 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 FASP25445 335 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 SESN3P58005 492 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 VLDLRP98155 873 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 FAM27E3Q08E93 113 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 MERTKQ12866 999 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 SELENBP1Q13228 472 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 EXOC3L2Q2M3D2 409 aa12.94□□□□□ -0.34
COMMD4-225ENST00000569245 MRPL2Q5T653 305 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms