RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, human

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-222	ENST00000543627	GALNT5	Q7Z7M9	940 aa		9.83	□□□□□ -0.84
DDB1-222	ENST00000543627	PATL1	Q86TB9	770 aa	Known RBP	9.83	□□□□□ -0.84
DDB1-222	ENST00000543627	RANBP3L	Q86VV4	465 aa	Predicted RBP	9.83	□□□□□ -0.84
DDB1-222	ENST00000543627	CXorf67	Q86X51	503 aa	Predicted RBP	9.83	□□□□□ -0.84
DDB1-222	ENST00000543627	TREML1	Q86YW5	311 aa		9.83	□□□□□ -0.84
DDB1-222	ENST00000543627	SLC30A8	Q8IWU4	369 aa		9.83	□□□□□ -0.84
DDB1-222	ENST00000543627	TMEM99	Q8N816	258 aa		9.83	□□□□□ -0.84
DDB1-222	ENST00000543627	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	9.83	□□□□□ -0.84
DDB1-222	ENST00000543627	OR8J3	Q8NGG0	315 aa		9.83	□□□□□ -0.84
DDB1-222	ENST00000543627	NRGN	Q92686	78 aa		9.83	□□□□□ -0.84
DDB1-222	ENST00000543627	C3orf49	Q96BT1	292 aa		9.83	□□□□□ -0.84
DDB1-222	ENST00000543627	CMTM5	Q96DZ9	223 aa		9.83	□□□□□ -0.84
DDB1-222	ENST00000543627	TPD52L3	Q96J77	140 aa		9.83	□□□□□ -0.84
DDB1-222	ENST00000543627	WFDC6	Q9BQY6	131 aa		9.83	□□□□□ -0.84
DDB1-222	ENST00000543627	RSPO3	Q9BXY4	272 aa	Predicted RBP	9.83	□□□□□ -0.84
DDB1-222	ENST00000543627	TRIM2	Q9C040	744 aa		9.83	□□□□□ -0.84
DDB1-222	ENST00000543627	EMC3	Q9P0I2	261 aa		9.83	□□□□□ -0.84
DDB1-222	ENST00000543627	GMPR2	Q9P2T1	348 aa	Known RBP	9.83	□□□□□ -0.84
DDB1-222	ENST00000543627	PRSS50	Q9UI38	385 aa		9.83	□□□□□ -0.84
DDB1-222	ENST00000543627	TRAPPC4	Q9Y296	219 aa		9.83	□□□□□ -0.84
DDB1-222	ENST00000543627	SH3GLB1	Q9Y371	365 aa		9.83	□□□□□ -0.84
DDB1-222	ENST00000543627	GMEB1	Q9Y692	573 aa		9.83	□□□□□ -0.84
DDB1-222	ENST00000543627	MPDZ	O75970	2070 aa		9.83	□□□□□ -0.84
DDB1-222	ENST00000543627		A6NNC1	897 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	ZNF814	B7Z6K7	855 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	FXYD1	O00168	92 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	SLC22A2	O15244	555 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	EIF1B	O60739	113 aa	Known RBP	9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	MRPL33	O75394	65 aa	Known RBP	9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	GCM2	O75603	506 aa	Predicted RBP	9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	TNFRSF1B	P20333	461 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	IL32	P24001	234 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	HTR2A	P28223	471 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	MXRA7	P84157	204 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	SORD	Q00796	357 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	GUSBP1	Q15486	140 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	CASP12	Q6UXS9	341 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	NET1	Q7Z628	596 aa	Predicted RBP	9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	ATG4D	Q86TL0	474 aa	Predicted RBP	9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	WFDC8	Q8IUA0	241 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	RBM45	Q8IUH3	476 aa	Known RBP	9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	KDM8	Q8N371	416 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	ACBD4	Q8NC06	268 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	OR2T12	Q8NG77	320 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	GPR32P1	Q8NGA4	272 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	PIGX	Q8TBF5	258 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	PROX1	Q92786	737 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	TAMM41	Q96BW9	452 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	KTI12	Q96EK9	354 aa	Predicted RBP	9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	PIK3IP1	Q96FE7	263 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	SLC47A1	Q96FL8	570 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	ZNF583	Q96ND8	569 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	DACH2	Q96NX9	599 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	POTEKP	Q9BYX7	375 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	CLEC4M	Q9H2X3	399 aa	Predicted RBP	9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	CMTM6	Q9NX76	183 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	ZNF226	Q9NYT6	803 aa		9.82	□□□□□ -0.84
DDB1-222	ENST00000543627	NOTCH2	Q04721	2471 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	DCHS2	Q6V1P9	2916 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	ELOVL7	A1L3X0	281 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	LIPT2	A6NK58	231 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	TPST2	O60704	377 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	CTAG2	O75638	210 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	LYZL6	O75951	148 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	KRT33A	O76009	404 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	LGI1	O95970	557 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	OR1E2	P47887	323 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	GZMM	P51124	257 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	MAP2K6	P52564	334 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	SLC7A2	P52569	658 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	PCBP3	P57721	371 aa	Known RBP	9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	LIPE	Q05469	1076 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	STK11	Q15831	433 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	ENTPD8	Q5MY95	495 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	C9orf135	Q5VTT2	229 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	ERICH5	Q6P6B1	374 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	ULK3	Q6PHR2	472 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	TFAP2E	Q6VUC0	442 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	DEF8	Q6ZN54	512 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	MICU2	Q8IYU8	434 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	OR6T1	Q8NGN1	323 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	DNAJA4	Q8WW22	397 aa	Predicted RBP	9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	APH1A	Q96BI3	265 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	TACO1	Q9BSH4	297 aa	Known RBP	9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	ACTR6	Q9GZN1	396 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	BCO1	Q9HAY6	547 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	ADA2	Q9NZK5	511 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	UPB1	Q9UBR1	384 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	TES	Q9UGI8	421 aa	Known RBP	9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	ARL2BP	Q9Y2Y0	163 aa		9.81	□□□□□ -0.84
DDB1-222	ENST00000543627	CIB4	A0PJX0	185 aa		9.8	□□□□□ -0.84
DDB1-222	ENST00000543627	ZNF724	A8MTY0	619 aa		9.8	□□□□□ -0.84
DDB1-222	ENST00000543627	FAM220BP	B1ANY3	271 aa		9.8	□□□□□ -0.84
DDB1-222	ENST00000543627	KPNA4	O00629	521 aa	Predicted RBP	9.8	□□□□□ -0.84
DDB1-222	ENST00000543627	GPR171	O14626	319 aa		9.8	□□□□□ -0.84
DDB1-222	ENST00000543627	ZNF682	O95780	498 aa		9.8	□□□□□ -0.84
DDB1-222	ENST00000543627	IFNA14	P01570	189 aa		9.8	□□□□□ -0.84
DDB1-222	ENST00000543627	PNMT	P11086	282 aa		9.8	□□□□□ -0.84
DDB1-222	ENST00000543627	NQO1	P15559	274 aa	Known RBP	9.8	□□□□□ -0.84
DDB1-222	ENST00000543627	CDH2	P19022	906 aa	Predicted RBP	9.8	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms