RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 OR13C2Q8NGS9 318 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 OR6K3Q8NGY3 331 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 GPR160Q9UJ42 338 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 COPS3Q9UNS2 423 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 PRKAB1Q9Y478 270 aa16.23■□□□□ 0.19
RAB40C-205ENST00000539661 PCYT1BQ9Y5K3 369 aaPredicted RBP16.23■□□□□ 0.19
RAB40C-205ENST00000539661 A0A1W2PS29 197 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 C4orf51C9J302 202 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 NUPL2O15504 423 aaKnown RBP16.22■□□□□ 0.19
RAB40C-205ENST00000539661 PTP4A3O75365 173 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 PRNPP04156 253 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 HOXB3P14651 431 aaPredicted RBP16.22■□□□□ 0.19
RAB40C-205ENST00000539661 HTR2AP28223 471 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 MPPED2Q15777 294 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 TMEM69Q5SWH9 247 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 ZNF660Q6AZW8 331 aaPredicted RBP16.22■□□□□ 0.19
RAB40C-205ENST00000539661 ARHGAP11AQ6P4F7 1023 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 FCRLAQ7L513 359 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 KCT2Q8NC54 265 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 SLC16A11Q8NCK7 471 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 CDS1Q92903 461 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 GCDHQ92947 438 aaPredicted RBP16.22■□□□□ 0.19
RAB40C-205ENST00000539661 ORAI1Q96D31 301 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 VWCEQ96DN2 955 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 MRPL48Q96GC5 212 aaKnown RBP16.22■□□□□ 0.19
RAB40C-205ENST00000539661 SLC38A3Q99624 504 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 NPAS1Q99742 590 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 SLC23A2Q9UGH3 650 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 MED31Q9Y3C7 131 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 MYO10Q9HD67 2058 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 ITGB8P26012 769 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 FAUP35544 74 aaKnown RBP16.22■□□□□ 0.19
RAB40C-205ENST00000539661 BCL6P41182 706 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 B2MP61769 119 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 GGTLC2Q14390 218 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 LY6G5CQ5SRR4 150 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 HES5Q5TA89 166 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 DNM1P46Q6ZS02 220 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 DGLUCYQ7Z3D6 616 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 LRRTM4Q86VH4 590 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 SMAP2Q8WU79 429 aaPredicted RBP16.22■□□□□ 0.19
RAB40C-205ENST00000539661 HAVCR1Q96D42 359 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 GFI1Q99684 422 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 RNF208Q9H0X6 261 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 SLC6A20Q9NP91 592 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 NOX4Q9NPH5 578 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 EXOSC3Q9NQT5 275 aaKnown RBP16.22■□□□□ 0.19
RAB40C-205ENST00000539661 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.22■□□□□ 0.19
RAB40C-205ENST00000539661 ANKRD10Q9NXR5 420 aa16.22■□□□□ 0.19
RAB40C-205ENST00000539661 F5H5P2 479 aa16.21■□□□□ 0.19
RAB40C-205ENST00000539661 AMZ1Q400G9 498 aa16.21■□□□□ 0.19
RAB40C-205ENST00000539661 SLC36A1Q7Z2H8 476 aa16.21■□□□□ 0.19
RAB40C-205ENST00000539661 C1orf216Q8TAB5 229 aa16.21■□□□□ 0.19
RAB40C-205ENST00000539661 COX14Q96I36 57 aa16.21■□□□□ 0.19
RAB40C-205ENST00000539661 CNN2Q99439 309 aaKnown RBP16.21■□□□□ 0.19
RAB40C-205ENST00000539661 ICAM5Q9UMF0 924 aa16.21■□□□□ 0.19
RAB40C-205ENST00000539661 RPA2P15927 270 aa16.21■□□□□ 0.19
RAB40C-205ENST00000539661 EDNRAP25101 427 aa16.21■□□□□ 0.19
RAB40C-205ENST00000539661 PWWP2BQ6NUJ5 590 aa16.21■□□□□ 0.19
RAB40C-205ENST00000539661 NRROSQ86YC3 692 aa16.21■□□□□ 0.19
RAB40C-205ENST00000539661 RFLNBQ8N5W9 214 aa16.21■□□□□ 0.19
RAB40C-205ENST00000539661 CYB561A3Q8NBI2 242 aa16.21■□□□□ 0.19
RAB40C-205ENST00000539661 OR2A1Q8NGT9 310 aa16.21■□□□□ 0.19
RAB40C-205ENST00000539661 ZDHHC1Q8WTX9 485 aa16.21■□□□□ 0.19
RAB40C-205ENST00000539661 WDR89Q96FK6 387 aaPredicted RBP16.21■□□□□ 0.19
RAB40C-205ENST00000539661 SMAD5Q99717 465 aaKnown RBP16.21■□□□□ 0.19
RAB40C-205ENST00000539661 EVA1AQ9H8M9 152 aa16.21■□□□□ 0.19
RAB40C-205ENST00000539661 FBXL4Q9UKA2 621 aa16.21■□□□□ 0.19
RAB40C-205ENST00000539661 ETV7Q9Y603 341 aa16.21■□□□□ 0.19
RAB40C-205ENST00000539661 V9GY05 133 aa16.21■□□□□ 0.19
RAB40C-205ENST00000539661 FXYD6-FXYD2A0A087WZ82 144 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 EGFP01133 1207 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 APOC3P02656 99 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 DBIP07108 87 aaKnown RBP16.2■□□□□ 0.18
RAB40C-205ENST00000539661 RPS4Y1P22090 263 aaKnown RBP16.2■□□□□ 0.18
RAB40C-205ENST00000539661 DCTDP32321 178 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 DEFB103AP81534 67 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 RBMS2Q15434 407 aaKnown RBP16.2■□□□□ 0.18
RAB40C-205ENST00000539661 FCRLBQ6BAA4 426 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 SYNPRQ8TBG9 265 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 SNX33Q8WV41 574 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 ARMC5Q96C12 935 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 GINS4Q9BRT9 223 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 FXYD6Q9H0Q3 95 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 C14orf105Q9NVL8 296 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 ATPIF1Q9UII2 106 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 PPP1R3DO95685 299 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 CERS1P27544 350 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 SLC6A6P31641 620 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 STX4Q12846 297 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 EIF2B5Q13144 721 aaKnown RBP16.2■□□□□ 0.18
RAB40C-205ENST00000539661 LTB4RQ15722 352 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 CLVS2Q5SYC1 327 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 PXT1Q8NFP0 134 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 RPS4Y2Q8TD47 263 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 DMRTA2Q96SC8 542 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 MCCC2Q9HCC0 563 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 PRSS16Q9NQE7 514 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 SERTAD3Q9UJW9 196 aa16.2■□□□□ 0.18
RAB40C-205ENST00000539661 PIN1P1O15428 100 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms